iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021767

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02001167

Gene Name

TRIM55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000001635.3	ENSCPOT00000001656.2	ENSCPOP00000001475.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.00e-09	35.9	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C   +            g    s ++frCP Cr
   Q: 26   CPICLEMFTKPVVILPCQHNLCRKCASDIfqasnpylptrGGTTVASGGRFRCPSCR 82
           *************************744445557779999888889**********8 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MSASLNYKSF SKEQQTMDNL EKQLICPICL EMFTKPVVIL PCQHNLCRKC ASDIFQASNP 60
YLPTRGGTTV ASGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESIRPEKKSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTGCAT CTCTGAATTA CAAGTCTTTT TCCAAAGAGC AGCAAACCAT GGATAACTTG 60
GAGAAACAAC TTATCTGTCC TATCTGCCTA GAGATGTTCA CGAAACCAGT GGTAATTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002421	Ailuropoda melanoleuca	87.61	0.00e+00	858.00
IUUC-Apl-003341	Anas platyrhynchos	72.67	0.00e+00	670.00
IUUC-Aca-005384	Anolis carolinensis	63.65	2.00e-178	619.00
IUUC-Ame-010720	Astyanax mexicanus	71.52	2.00e-139	488.00
IUUC-Bta-013040	Bos taurus	83.24	0.00e+00	818.00
IUUC-Cja-019932	Callithrix jacchus	88.14	0.00e+00	844.00
IUUC-Cfa-020450	Canis familiaris	87.09	0.00e+00	874.00
IUUC-Csa-023600	Chlorocebus sabaeus	86.18	0.00e+00	863.00
IUUC-Cho-024753	Choloepus hoffmanni	74.45	0.00e+00	714.00
IUUC-Dre-028701	Danio rerio	70.57	3.00e-138	484.00
IUUC-Dno-030008	Dasypus novemcinctus	82.46	0.00e+00	836.00
IUUC-Ete-032274	Echinops telfairi	77.66	0.00e+00	752.00
IUUC-Eca-034326	Equus caballus	86.34	0.00e+00	822.00
IUUC-Fca-035385	Felis catus	86.69	0.00e+00	802.00
IUUC-Fal-036679	Ficedula albicollis	89.52	3.00e-176	611.00
IUUC-Gmo-039021	Gadus morhua	65.19	2.00e-120	425.00
IUUC-Gga-040576	Gallus gallus	89.21	5.00e-174	603.00
IUUC-Gac-042165	Gasterosteus aculeatus	66.26	2.00e-132	464.00
IUUC-Ggo-044496	Gorilla gorilla	87.09	0.00e+00	834.00
IUUC-Hsa-046337	Homo sapiens	87.45	0.00e+00	834.00
IUUC-Lch-050504	Latimeria chalumnae	64.95	3.00e-179	621.00
IUUC-Loc-052717	Lepisosteus oculatus	56.08	7.00e-158	550.00
IUUC-Laf-053838	Loxodonta africana	79.38	0.00e+00	833.00
IUUC-Mcc-054690	Macaca mulatta	86.68	0.00e+00	833.00
IUUC-Meu-056782	Macropus eugenii	66.93	0.00e+00	633.00
IUUC-Mga-060112	Meleagris gallopavo	88.64	4.00e-173	600.00
IUUC-Mmr-061229	Microcebus murinus	85.90	0.00e+00	853.00
IUUC-Mdo-062397	Monodelphis domestica	73.99	0.00e+00	728.00
IUUC-Mmu-063764	Mus musculus	81.68	0.00e+00	826.00
IUUC-Mpu-066503	Mustela putorius furo	87.02	0.00e+00	862.00
IUUC-Mlu-068160	Myotis lucifugus	95.93	6.00e-99	352.00
IUUC-Nle-069170	Nomascus leucogenys	86.70	0.00e+00	843.00
IUUC-Ont-072082	Oreochromis niloticus	68.15	5.00e-132	464.00
IUUC-Oan-072715	Ornithorhynchus anatinus	71.78	0.00e+00	712.00
IUUC-Ocu-074747	Oryctolagus cuniculus	86.47	0.00e+00	781.00
IUUC-Ola-086646	Oryzias latipes	64.81	4.00e-128	451.00
IUUC-Oga-087995	Otolemur garnettii	85.79	0.00e+00	846.00
IUUC-Oar-089844	Ovis aries	83.79	0.00e+00	837.00
IUUC-Ptr-091556	Pan troglodytes	87.27	0.00e+00	833.00
IUUC-Pan-092224	Papio anubis	86.68	0.00e+00	830.00
IUUC-Psi-093856	Pelodiscus sinensis	71.88	0.00e+00	729.00
IUUC-Pma-094534	Petromyzon marinus	56.04	3.00e-101	361.00
IUUC-Pfo-096596	Poecilia formosa	61.54	7.00e-129	453.00
IUUC-Pca-100510	Procavia capensis	78.57	0.00e+00	823.00
IUUC-Pva-102962	Pteropus vampyrus	83.51	0.00e+00	777.00
IUUC-Rno-105696	Rattus norvegicus	82.05	0.00e+00	797.00
IUUC-Sha-106825	Sarcophilus harrisii	74.73	0.00e+00	728.00
IUUC-Sar-113763	Sorex araneus	79.08	2.00e-105	376.00
IUUC-Ssc-116332	Sus scrofa	85.61	0.00e+00	802.00
IUUC-Tgu-117208	Taeniopygia guttata	89.21	1.00e-176	612.00
IUUC-Tru-118744	Takifugu rubripes	65.24	8.00e-131	459.00
IUUC-Tsy-119352	Tarsius syrichta	84.39	0.00e+00	856.00
IUUC-Tni-120413	Tetraodon nigroviridis	67.41	3.00e-129	454.00
IUUC-Tbe-127821	Tupaia belangeri	99.00	7.00e-122	430.00
IUUC-Ttr-128545	Tursiops truncatus	84.13	0.00e+00	780.00
IUUC-Vpa-130699	Vicugna pacos	96.95	0.00e+00	676.00
IUUC-Xtr-132207	Xenopus tropicalis	62.45	1.00e-180	625.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence