iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048393

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01015703

Gene Name

LNX1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000012178.2	ENSSTOT00000012178.2	ENSSTOP00000010919.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	89.89	0.00e+00	1329.00	IUUC-Hsa-046470
E3 activity/RING/RING	89.71	0.00e+00	1328.00	IUUC-Mmu-063364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MIQPNSVDDP DSSPYPLCVV CGQAHSPEEN HFYTYSEDVD DDLICHICLQ ALLDPLDTPC 60
GHTYCTVCLT NFLVEKDFCP VDRKPVVLQH CKKSSILVNK LLNKLLVTCP FTEHCSEVLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCCAGC CAAACTCCGT TGATGACCCG GATTCCAGCC CTTACCCGCT ATGTGTGGTT 60
TGCGGCCAAG CCCACTCCCC CGAGGAAAAC CATTTCTATA CCTACTCTGA AGATGTGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001478--PDZ
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00595--PDZ

SMART

SM00228--PDZ
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051260--P:protein homooligomerization
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002005	Ailuropoda melanoleuca	87.71	0.00e+00	1212.00
IUUC-Apl-003561	Anas platyrhynchos	73.34	0.00e+00	1014.00
IUUC-Aca-005346	Anolis carolinensis	72.75	0.00e+00	1053.00
IUUC-Bta-012970	Bos taurus	89.94	0.00e+00	1263.00
IUUC-Cja-019412	Callithrix jacchus	88.93	0.00e+00	1274.00
IUUC-Cfa-020735	Canis familiaris	89.07	0.00e+00	1297.00
IUUC-Cpo-022198	Cavia porcellus	78.10	0.00e+00	1057.00
IUUC-Dre-028841	Danio rerio	51.15	3.00e-29	120.00
IUUC-Dno-028889	Dasypus novemcinctus	90.48	0.00e+00	1318.00
IUUC-Dor-030810	Dipodomys ordii	80.58	0.00e+00	940.00
IUUC-Fca-036264	Felis catus	90.25	0.00e+00	1239.00
IUUC-Fal-037198	Ficedula albicollis	73.73	0.00e+00	1078.00
IUUC-Gga-040766	Gallus gallus	69.44	0.00e+00	1018.00
IUUC-Ggo-045057	Gorilla gorilla	89.34	0.00e+00	1300.00
IUUC-Hsa-046470	Homo sapiens	89.89	0.00e+00	1329.00
IUUC-Lch-050081	Latimeria chalumnae	64.31	0.00e+00	924.00
IUUC-Loc-052884	Lepisosteus oculatus	62.01	0.00e+00	894.00
IUUC-Laf-054498	Loxodonta africana	89.75	0.00e+00	1294.00
IUUC-Meu-056401	Macropus eugenii	51.88	9.00e-137	480.00
IUUC-Mga-059504	Meleagris gallopavo	73.28	0.00e+00	1052.00
IUUC-Mmr-060696	Microcebus murinus	63.03	0.00e+00	765.00
IUUC-Mdo-062731	Monodelphis domestica	81.88	0.00e+00	1205.00
IUUC-Mmu-063364	Mus musculus	89.71	0.00e+00	1328.00
IUUC-Mpu-066626	Mustela putorius furo	88.66	0.00e+00	1283.00
IUUC-Mlu-068207	Myotis lucifugus	88.67	0.00e+00	1249.00
IUUC-Nle-069304	Nomascus leucogenys	90.30	0.00e+00	1337.00
IUUC-Opr-071080	Ochotona princeps	74.65	0.00e+00	1053.00
IUUC-Ont-072002	Oreochromis niloticus	58.46	0.00e+00	797.00
IUUC-Ola-086477	Oryzias latipes	57.80	0.00e+00	820.00
IUUC-Oga-089142	Otolemur garnettii	87.72	0.00e+00	1263.00
IUUC-Oar-090359	Ovis aries	88.80	0.00e+00	1266.00
IUUC-Ptr-090797	Pan troglodytes	89.75	0.00e+00	1328.00
IUUC-Pan-091910	Papio anubis	89.75	0.00e+00	1328.00
IUUC-Psi-093386	Pelodiscus sinensis	75.38	0.00e+00	1040.00
IUUC-Pfo-096370	Poecilia formosa	58.33	0.00e+00	793.00
IUUC-Pab-097761	Pongo abelii	90.47	0.00e+00	1030.00
IUUC-Pva-102443	Pteropus vampyrus	90.66	0.00e+00	984.00
IUUC-Rno-106030	Rattus norvegicus	89.03	0.00e+00	1311.00
IUUC-Sha-107609	Sarcophilus harrisii	80.52	0.00e+00	1174.00
IUUC-Sar-113333	Sorex araneus	86.86	0.00e+00	1275.00
IUUC-Ssc-116222	Sus scrofa	80.14	0.00e+00	1115.00
IUUC-Tgu-117019	Taeniopygia guttata	74.27	0.00e+00	1050.00
IUUC-Tru-118481	Takifugu rubripes	60.61	0.00e+00	840.00
IUUC-Tni-119796	Tetraodon nigroviridis	57.61	3.00e-148	518.00
IUUC-Tbe-127538	Tupaia belangeri	87.12	0.00e+00	1231.00
IUUC-Ttr-128787	Tursiops truncatus	88.00	0.00e+00	1220.00
IUUC-Xtr-132476	Xenopus tropicalis	62.98	0.00e+00	851.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence