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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-104917
Ensembl Protein ID ENSRNOP00000059486.1
UniProt Accession Q5FVF3; Q5FVF3_RAT
Genbank Protein ID AAH90031.1
Protein Name Golgi associated, gamma adaptin ear containing, ARF binding protein 1; Golgi-associated, gamma adaptin ear-containing, ARF-binding protein 1
Genbank Nucleotide ID AC096473
Gene Name Gga1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000008897.6 ENSRNOT00000063876.1 ENSRNOP00000059486.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFACRAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/GAT 3.10e-52 176.3 98 224
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/GAT
   S: 1    deeksklLerLlkskkPeDLreAnkLikelvkededkaekikkliseleevksnvkllnemlselspegeepednellqelyetckaar 89
           deeksk+L+rLlks++PeDLr+AnkLike+v+ed++++eki+k+++++eev++nvkll+em++++s++++++++++l++ely++c+++r
   Q: 98   DEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGAASSSSEDLMKELYQRCERMR 186
           79*************************************************************************************** PP
   S: 90   pkllklieeeedndellaellkanDelnqvlnkykqlk 127
           p+l++l++++ednde+lae+l+anD+l+qv+n ykql+
   Q: 187  PTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLV 224
           ***********************************987 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MKSCGKRFHD EVGKFRFLNE LIKVVSPKYL GSRTSEKVKN KILELLYSWT VGLPEEVKIA 60
EAYQMLKKQG IVKSDPKLPE DAIFPLPPPR PKNVIFEDEE KSKMLARLLK SSHPEDLRAA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-104917|UBD,GAT|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGAGCTCAGA CTTGGGGGCT GTCCAACAAG TGGAGGGAAT CACCTCCCAC GCGCTCAATC 60
CCTCTTAACC GTGCCCGTTG CAGGATAGTT AGGGAGGCAG AAATTTCACT CTCCCATTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-104917|UBD,GAT|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR008152--Clathrin_a/b/g-adaptin_app_Ig
IPR008153--Clathrin_g-adaptin_app
IPR013041--Coatomer/clathrin_app_Ig-like
IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR002014--VHS_dom
PROSITE

PS50180--GAE
PS50909--GAT
PS50179--VHS
Pfam

PF02883--Alpha_adaptinC2
PF03127--GAT
PF00790--VHS
SMART

SM00809--Alpha_adaptinC2
Gene Ontology

GO:0030131--C:clathrin adaptor complex
GO:0005654--C:nucleoplasm
GO:0006886--P:intracellular protein transport
GO:0045732--P:positive regulation of protein catabolic process
GO:1901998--P:toxin transport
GO:0016192--P:vesicle-mediated transport
KEGG rno:300066
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001226 Ailuropoda melanoleuca 84.07 0.00e+00 842.00
IUUC-Apl-003932 Anas platyrhynchos 80.86 1.00e-135 476.00
IUUC-Afl-008682 Aspergillus flavus 24.57 3.00e-20 93.60
IUUC-Ame-011684 Astyanax mexicanus 70.00 1.00e-107 383.00
IUUC-Bta-012975 Bos taurus 89.03 0.00e+00 891.00
IUUC-Cja-019098 Callithrix jacchus 82.46 0.00e+00 792.00
IUUC-Cfa-020394 Canis familiaris 89.03 0.00e+00 874.00
IUUC-Cpo-022352 Cavia porcellus 89.56 0.00e+00 923.00
IUUC-Csa-024037 Chlorocebus sabaeus 90.46 0.00e+00 868.00
IUUC-Csv-026066 Ciona savignyi 39.68 1.00e-110 394.00
IUUC-Dre-027709 Danio rerio 62.81 1.00e-179 623.00
IUUC-Dno-029170 Dasypus novemcinctus 79.37 0.00e+00 752.00
IUUC-Dor-030638 Dipodomys ordii 89.38 0.00e+00 902.00
IUUC-Eca-034275 Equus caballus 88.65 0.00e+00 893.00
IUUC-Eeu-035068 Erinaceus europaeus 69.56 0.00e+00 697.00
IUUC-Fca-036278 Felis catus 95.85 4.00e-121 429.00
IUUC-Fal-036971 Ficedula albicollis 78.95 0.00e+00 782.00
IUUC-Gmo-039301 Gadus morhua 57.39 8.00e-119 421.00
IUUC-Gga-040880 Gallus gallus 75.00 0.00e+00 764.00
IUUC-Gac-041955 Gasterosteus aculeatus 60.87 1.00e-168 586.00
IUUC-Ggo-045652 Gorilla gorilla 90.28 0.00e+00 863.00
IUUC-Hsa-045919 Homo sapiens 90.28 0.00e+00 864.00
IUUC-Itr-048105 Ictidomys tridecemlineatus 90.41 0.00e+00 932.00
IUUC-Lch-049488 Latimeria chalumnae 66.67 0.00e+00 646.00
IUUC-Laf-053697 Loxodonta africana 86.02 0.00e+00 843.00
IUUC-Mcc-054687 Macaca mulatta 86.93 0.00e+00 793.00
IUUC-Meu-056352 Macropus eugenii 73.85 0.00e+00 705.00
IUUC-Mpo-057584 Magnaporthe poae 28.75 6.00e-09 55.80
IUUC-Mga-059936 Meleagris gallopavo 78.85 0.00e+00 789.00
IUUC-Mmr-060805 Microcebus murinus 86.22 0.00e+00 836.00
IUUC-Mdo-061808 Monodelphis domestica 79.05 0.00e+00 755.00
IUUC-Mmu-063131 Mus musculus 95.91 0.00e+00 895.00
IUUC-Mpu-066602 Mustela putorius furo 86.07 0.00e+00 881.00
IUUC-Mlu-068220 Myotis lucifugus 88.65 0.00e+00 849.00
IUUC-Nle-069039 Nomascus leucogenys 90.46 0.00e+00 861.00
IUUC-Opr-070709 Ochotona princeps 82.98 0.00e+00 851.00
IUUC-Ont-072069 Oreochromis niloticus 60.03 1.00e-172 600.00
IUUC-Oan-072906 Ornithorhynchus anatinus 70.69 0.00e+00 734.00
IUUC-Ola-086728 Oryzias latipes 54.35 1.00e-156 546.00
IUUC-Oga-088189 Otolemur garnettii 85.87 0.00e+00 836.00
IUUC-Oar-089226 Ovis aries 86.40 0.00e+00 849.00
IUUC-Pan-092529 Papio anubis 90.64 0.00e+00 870.00
IUUC-Psi-093412 Pelodiscus sinensis 72.05 0.00e+00 761.00
IUUC-Pfo-096458 Poecilia formosa 59.65 2.00e-173 602.00
IUUC-Pab-097684 Pongo abelii 89.22 0.00e+00 807.00
IUUC-Pca-100546 Procavia capensis 86.90 0.00e+00 653.00
IUUC-Pva-102877 Pteropus vampyrus 83.72 0.00e+00 839.00
IUUC-Sha-107248 Sarcophilus harrisii 78.11 0.00e+00 709.00
IUUC-Ssc-115539 Sus scrofa 81.40 2.00e-102 365.00
IUUC-Tgu-117227 Taeniopygia guttata 78.21 0.00e+00 781.00
IUUC-Tru-118666 Takifugu rubripes 57.14 6.00e-169 587.00
IUUC-Tni-120663 Tetraodon nigroviridis 59.49 5.00e-160 557.00
IUUC-Tbe-127589 Tupaia belangeri 89.03 0.00e+00 828.00
IUUC-Ttr-128616 Tursiops truncatus 89.56 0.00e+00 920.00
IUUC-Xtr-132596 Xenopus tropicalis 63.05 1.00e-123 436.00
Created Date 25-Jun-2017

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