iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058246

Ensembl Protein ID

KEH43460

UniProt Accession

A0A072VZH9; A0A072VZH9_MEDTR

Genbank Protein ID

KEH43457.1; KEH43460.1

Protein Name

C3HC4-type RING zinc finger protein

Genbank Nucleotide ID

CM001217; CM001217

Gene Name

MTR_1g093975; MTR_1g094005

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g094005	KEH43460	KEH43460

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-06	29.1	17	64
E3 activity/RING/RING	6.30e-07	31.2	22	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl 50
            e f CpI le+  +P+++++G+++ +++++  +   g+ cP++++ +
   Q: 17   TEKFSCPICLEIYFEPCTTCCGHSFCKKCLQSSIYMAGQRCPLCKEWI 64
           689*******************************777778***99865 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle +++ p+++ CgH f+++Cl   +       +  +rCPlC+
   Q: 22   CPICLEIYFE-PCTTCCGHSFCKKCLqSSI------YMAGQRCPLCK 61
           **********.**************95333......678888****7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSDLSSAVI PYTDELTEKF SCPICLEIYF EPCTTCCGHS FCKKCLQSSI YMAGQRCPLC 60
KEWISNRFPY SVNIALWDAV QFLFPNEVKS RKAVDASNIS KGISRQPSEM PPLDAFLQTF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTCTG ATTTGTCGTC CGCTGTTATC CCTTACACCG ATGAACTCAC CGAGAAGTTT 60
TCATGTCCGG TAATGAAATC CTTGTGATGT TTTTTCTAAT CTAGCTTTAT ACATTGTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g093975; mtr:MTR_1g094005

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025679	Ciona intestinalis	43.75	2.00e-13	68.90
IUUC-Csv-026052	Ciona savignyi	37.50	2.00e-11	62.00
IUUC-Kpa-049137	Komagataella pastoris	32.63	6.00e-10	57.80
IUUC-Lch-050649	Latimeria chalumnae	36.59	1.00e-11	63.50
IUUC-Meu-056670	Macropus eugenii	38.60	7.00e-09	54.70
IUUC-Mla-059039	Melampsora laricipopulina	30.95	2.00e-09	56.60
IUUC-Mga-059380	Meleagris gallopavo	40.70	6.00e-12	64.30
IUUC-Pfo-097188	Poecilia formosa	36.70	7.00e-15	74.70
IUUC-Pca-100409	Procavia capensis	43.04	9.00e-10	57.80
IUUC-Sha-107284	Sarcophilus harrisii	33.33	4.00e-10	58.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence