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Tag Content
UUCD2 ID IUUC-Ssc-116134
UUCD1 version UUC-SuS-00052
Ensembl Protein ID ENSSSCP00000008315.2
UniProt Accession F1RG77; F1RG77_PIG
Genbank Protein ID ENSSSCP00000008315
Protein Name Uncharacterized protein
Genbank Nucleotide ID FP102572
Gene Name RNF40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000007786.2 ENSSSCT00000008534.2 ENSSSCP00000008315.2
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 30.00 7.00e-29 126.00 IUUC-Ath-007462
E3 activity/RING/RING 42.34 0.00e+00 692.00 IUUC-Dme-032034
E3 activity/RING/RING 94.71 0.00e+00 1700.00 IUUC-Hsa-045732
E3 activity/RING/RING 91.72 0.00e+00 1646.00 IUUC-Rno-105165
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Sus scrofa
Protein Sequence
(Fasta)
MSGPGNKRAA GDGGSGPPEK KLNREEKTTT TLIEPIRLGG ISSTEEMDLK VLQFKNKKLA 60
ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ LDETVEALLR HHESQGELSS 120
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Protein Fasta Sequence


>IUUC-Ssc-116134|E3,RING|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCCCTCTCTT CGAAGTTGTT AATCTGAGGC AGGCGGCGTT ATTAGGACTG CGGAGTGGAA 60
GTGTGTTGTC AGTTACCATG GCAACTGCCT ACCGGCCAAT CACTGAGAGA AAGAGGAGGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ssc-116134|E3,RING|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
SMART

SM00184--RING
Gene Ontology

GO:0033503--C:HULC complex
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0003730--F:mRNA 3'-UTR binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:1900364--P:negative regulation of mRNA polyadenylation
GO:2001168--P:positive regulation of histone H2B ubiquitination
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001027 Aegilops tauschii 29.83 1.00e-12 68.20
IUUC-Aml-002295 Ailuropoda melanoleuca 97.00 0.00e+00 1733.00
IUUC-Atr-002836 Amborella trichopoda 30.51 8.00e-25 108.00
IUUC-Aca-004850 Anolis carolinensis 76.14 0.00e+00 679.00
IUUC-Aly-006055 Arabidopsis lyrata 27.85 5.00e-28 119.00
IUUC-Ath-007462 Arabidopsis thaliana 28.37 2.00e-28 120.00
IUUC-Ame-011745 Astyanax mexicanus 78.15 5.00e-150 525.00
IUUC-Bta-013173 Bos taurus 96.50 0.00e+00 1716.00
IUUC-Bci-013926 Botrytis cinerea 37.74 2.00e-08 54.30
IUUC-Bdi-015006 Brachypodium distachyon 51.52 1.00e-16 81.60
IUUC-Bol-015858 Brassica oleracea 28.91 8.00e-33 135.00
IUUC-Bra-016804 Brassica rapa 29.44 4.00e-34 139.00
IUUC-Cja-019042 Callithrix jacchus 94.01 0.00e+00 1624.00
IUUC-Cfa-020318 Canis familiaris 96.50 0.00e+00 1723.00
IUUC-Cpo-021539 Cavia porcellus 94.01 0.00e+00 1679.00
IUUC-Cre-022940 Chlamydomonas reinhardtii 37.93 8.00e-09 55.50
IUUC-Csa-024051 Chlorocebus sabaeus 95.00 0.00e+00 1593.00
IUUC-Cin-025174 Ciona intestinalis 42.86 0.00e+00 675.00
IUUC-Cgl-026569 Colletotrichum gloeosporioides 42.31 7.00e-10 58.90
IUUC-Dre-028171 Danio rerio 79.55 9.00e-150 524.00
IUUC-Dno-028892 Dasypus novemcinctus 94.71 0.00e+00 1637.00
IUUC-Dor-030268 Dipodomys ordii 93.91 0.00e+00 786.00
IUUC-Dme-032034 Drosophila melanogaster 42.36 0.00e+00 697.00
IUUC-Ete-032505 Echinops telfairi 88.40 7.00e-177 613.00
IUUC-Eca-033436 Equus caballus 95.90 0.00e+00 1735.00
IUUC-Eeu-035291 Erinaceus europaeus 89.03 0.00e+00 1281.00
IUUC-Fca-035720 Felis catus 96.10 0.00e+00 1720.00
IUUC-Fso-038414 Fusarium solani 40.38 1.00e-09 58.50
IUUC-Gmo-039269 Gadus morhua 78.65 4.00e-139 488.00
IUUC-Gac-041303 Gasterosteus aculeatus 64.58 1.00e-153 537.00
IUUC-Gma-042797 Glycine max 29.04 1.00e-35 144.00
IUUC-Ggo-045426 Gorilla gorilla 94.91 0.00e+00 1672.00
IUUC-Hsa-045732 Homo sapiens 94.71 0.00e+00 1702.00
IUUC-Itr-048724 Ictidomys tridecemlineatus 95.30 0.00e+00 1677.00
IUUC-Kpa-049345 Komagataella pastoris 27.59 1.00e-10 61.20
IUUC-Lch-049429 Latimeria chalumnae 82.20 3.00e-155 541.00
IUUC-Lpe-051253 Leersia perrieri 30.87 5.00e-32 132.00
IUUC-Loc-052847 Lepisosteus oculatus 77.37 3.00e-65 241.00
IUUC-Laf-054267 Loxodonta africana 94.81 0.00e+00 1687.00
IUUC-Mcc-055240 Macaca mulatta 95.00 0.00e+00 1595.00
IUUC-Meu-056750 Macropus eugenii 83.04 0.00e+00 1395.00
IUUC-Mor-057068 Magnaporthe oryzae 45.28 2.00e-12 67.40
IUUC-Mtr-057632 Medicago truncatula 28.30 2.00e-32 134.00
IUUC-Mvi-060341 Microbotryum violaceum 28.91 3.00e-21 97.10
IUUC-Mmr-061177 Microcebus murinus 95.40 0.00e+00 1691.00
IUUC-Mdo-062415 Monodelphis domestica 83.63 0.00e+00 1422.00
IUUC-Mmu-063981 Mus musculus 92.01 0.00e+00 1631.00
IUUC-Mac-065103 Musa acuminata 30.33 2.00e-41 164.00
IUUC-Mpu-066498 Mustela putorius furo 95.70 0.00e+00 1640.00
IUUC-Mlu-067242 Myotis lucifugus 94.91 0.00e+00 1687.00
IUUC-Nle-069320 Nomascus leucogenys 93.51 0.00e+00 821.00
IUUC-Opr-070286 Ochotona princeps 91.35 0.00e+00 1019.00
IUUC-Ont-071299 Oreochromis niloticus 79.17 1.00e-150 526.00
IUUC-Oan-073538 Ornithorhynchus anatinus 77.89 0.00e+00 631.00
IUUC-Ocu-073799 Oryctolagus cuniculus 95.00 0.00e+00 1679.00
IUUC-Oba-075000 Oryza barthii 27.91 5.00e-28 119.00
IUUC-Obr-076532 Oryza brachyantha 29.10 5.00e-31 129.00
IUUC-Ogl-077200 Oryza glaberrima 29.56 1.00e-30 128.00
IUUC-Ogu-078279 Oryza glumaepatula 27.91 4.00e-28 119.00
IUUC-Oin-079097 Oryza indica 29.56 1.00e-30 128.00
IUUC-Olo-080612 Oryza longistaminata 53.33 3.00e-15 77.80
IUUC-Ome-081304 Oryza meridionalis 29.43 2.00e-29 124.00
IUUC-Oni-082162 Oryza nivara 27.91 6.00e-28 119.00
IUUC-Opu-083683 Oryza punctata 51.52 2.00e-16 81.30
IUUC-Oru-084382 Oryza rufipogon 27.91 6.00e-28 119.00
IUUC-Osa-085839 Oryza sativa 51.52 2.00e-16 81.30
IUUC-Ola-086435 Oryzias latipes 66.87 3.00e-156 545.00
IUUC-Oga-089016 Otolemur garnettii 88.69 0.00e+00 1551.00
IUUC-Oar-089589 Ovis aries 96.90 0.00e+00 1727.00
IUUC-Ptr-090530 Pan troglodytes 95.20 0.00e+00 1304.00
IUUC-Pan-092502 Papio anubis 95.00 0.00e+00 1597.00
IUUC-Psi-093155 Pelodiscus sinensis 74.09 2.00e-143 502.00
IUUC-Pfo-097527 Poecilia formosa 52.64 0.00e+00 730.00
IUUC-Pab-098619 Pongo abelii 95.30 0.00e+00 1682.00
IUUC-Pop-099376 Populus trichocarpa 29.41 4.00e-34 139.00
IUUC-Pca-100544 Procavia capensis 94.31 0.00e+00 1675.00
IUUC-Ppe-102065 Prunus persica 32.11 2.00e-30 127.00
IUUC-Pva-102479 Pteropus vampyrus 95.19 0.00e+00 1398.00
IUUC-Pte-104415 Pyrenophora teres 28.94 3.00e-14 73.60
IUUC-Pyt-104762 Pyrenophora triticirepentis 35.71 2.00e-13 70.90
IUUC-Rno-105165 Rattus norvegicus 91.72 0.00e+00 1617.00
IUUC-Sha-107602 Sarcophilus harrisii 84.81 0.00e+00 1443.00
IUUC-Ssl-108546 Sclerotinia sclerotiorum 37.74 9.00e-09 55.50
IUUC-Sit-109889 Setaria italica 27.46 1.00e-29 124.00
IUUC-Sly-111490 Solanum lycopersicum 33.08 3.00e-41 163.00
IUUC-Sar-113755 Sorex araneus 92.46 0.00e+00 1331.00
IUUC-Tru-117867 Takifugu rubripes 63.11 8.00e-151 527.00
IUUC-Tsy-119065 Tarsius syrichta 91.00 0.00e+00 1454.00
IUUC-Tni-120802 Tetraodon nigroviridis 64.27 0.00e+00 997.00
IUUC-Tca-121060 Theobroma cacao 32.39 1.00e-38 154.00
IUUC-Tre-122150 Trichoderma reesei 41.51 1.00e-10 61.20
IUUC-Tvi-122431 Trichoderma virens 41.51 2.00e-10 61.20
IUUC-Tur-126160 Triticum urartu 50.00 5.00e-16 79.70
IUUC-Tme-127177 Tuber melanosporum 24.20 4.00e-11 63.20
IUUC-Tbe-127597 Tupaia belangeri 85.32 0.00e+00 1027.00
IUUC-Ttr-128303 Tursiops truncatus 96.12 0.00e+00 1668.00
IUUC-Vda-129815 Verticillium dahliae 40.38 9.00e-10 58.50
IUUC-Vvi-131316 Vitis vinifera 31.93 6.00e-35 142.00
IUUC-Xtr-132906 Xenopus tropicalis 69.22 0.00e+00 656.00
IUUC-Xma-133607 Xiphophorus maculatus 78.61 1.00e-147 517.00
Created Date 25-Jun-2017

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