iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088165

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03028568

Gene Name

RNF138

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000001235.2	ENSOGAT00000001236.2	ENSOGAP00000001106.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.70e-07	29.4	18	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C++C+e +k+++++  C+Hvf+++C+  ++           +CPlCr
   Q: 18   CPVCQEVLKTPVRTAACQHVFCRKCFlTAM------RESGVHCPLCR 58
           **********999999*********95666......999999****8 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MAEELSAATS YTEDDFYCPV CQEVLKTPVR TAACQHVFCR KCFLTAMRES GVHCPLCRGN 60
VTRRERACPE RALDLENIMK SFSGSCRCCA KQIKFYRMRH HYKSCKKYQD EYGVSSIIPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGAGG AGCTCTCTGC GGCCACTTCC TACACCGAAG ATGATTTCTA CTGCCCAGTC 60
TGTCAGGAGG TGCTCAAGAC GCCGGTGCGG ACCGCGGCCT GTCAGCACGT GTGAGTACGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008598--Di19_Zn_binding_dom
IPR034734--ZF_C2HC_RNF
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51803--ZF_C2HC_RNF
PS50089--ZF_RING_2

Pfam

PF05605--zf-Di19

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0035861--C:site of double-strand break
GO:0003697--F:single-stranded DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0000724--P:double-strand break repair via homologous recombination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001267	Ailuropoda melanoleuca	96.73	2.00e-143	501.00
IUUC-Apl-003941	Anas platyrhynchos	68.02	2.00e-91	328.00
IUUC-Aca-005233	Anolis carolinensis	67.49	7.00e-101	360.00
IUUC-Bta-012999	Bos taurus	96.33	1.00e-143	501.00
IUUC-Cja-019489	Callithrix jacchus	97.14	3.00e-144	503.00
IUUC-Cfa-020567	Canis familiaris	96.98	6.00e-115	405.00
IUUC-Cpo-022165	Cavia porcellus	96.33	4.00e-143	499.00
IUUC-Csa-024096	Chlorocebus sabaeus	97.55	1.00e-144	504.00
IUUC-Cho-024686	Choloepus hoffmanni	87.02	2.00e-104	370.00
IUUC-Dno-029625	Dasypus novemcinctus	96.73	4.00e-143	499.00
IUUC-Dor-030983	Dipodomys ordii	82.04	2.00e-114	404.00
IUUC-Ete-032453	Echinops telfairi	71.84	7.00e-99	352.00
IUUC-Eca-034367	Equus caballus	96.63	2.00e-121	427.00
IUUC-Eeu-034722	Erinaceus europaeus	76.44	1.00e-87	315.00
IUUC-Fca-036590	Felis catus	97.96	2.00e-145	507.00
IUUC-Fal-037287	Ficedula albicollis	71.60	2.00e-106	378.00
IUUC-Fox-037926	Fusarium oxysporum	37.80	2.00e-09	55.80
IUUC-Ggr-039833	Gaeumannomyces graminis	44.90	2.00e-07	50.40
IUUC-Gga-041055	Gallus gallus	70.29	3.00e-102	364.00
IUUC-Ggo-045324	Gorilla gorilla	97.14	4.00e-144	503.00
IUUC-Hsa-046364	Homo sapiens	97.14	4.00e-144	503.00
IUUC-Itr-048181	Ictidomys tridecemlineatus	96.73	2.00e-142	498.00
IUUC-Loc-052428	Lepisosteus oculatus	37.72	3.00e-45	174.00
IUUC-Laf-054506	Loxodonta africana	97.96	5.00e-145	506.00
IUUC-Mcc-054595	Macaca mulatta	97.60	4.00e-122	430.00
IUUC-Mor-057034	Magnaporthe oryzae	40.82	6.00e-08	52.00
IUUC-Mpo-057316	Magnaporthe poae	44.64	4.00e-08	52.80
IUUC-Mga-060068	Meleagris gallopavo	70.54	8.00e-102	362.00
IUUC-Mmr-061516	Microcebus murinus	95.16	2.00e-140	491.00
IUUC-Mdo-062243	Monodelphis domestica	86.18	2.00e-128	451.00
IUUC-Mmu-063719	Mus musculus	93.47	5.00e-140	489.00
IUUC-Mpu-065869	Mustela putorius furo	97.96	2.00e-145	507.00
IUUC-Mlu-068157	Myotis lucifugus	95.67	2.00e-120	424.00
IUUC-Nle-069538	Nomascus leucogenys	82.45	1.00e-113	401.00
IUUC-Opr-070640	Ochotona princeps	93.88	2.00e-140	490.00
IUUC-Oan-072919	Ornithorhynchus anatinus	86.93	3.00e-96	343.00
IUUC-Ocu-074897	Oryctolagus cuniculus	96.73	1.00e-143	501.00
IUUC-Oar-090364	Ovis aries	95.48	4.00e-115	406.00
IUUC-Ptr-090784	Pan troglodytes	97.14	4.00e-144	503.00
IUUC-Pan-091874	Papio anubis	97.55	1.00e-144	504.00
IUUC-Psi-093531	Pelodiscus sinensis	76.40	2.00e-105	374.00
IUUC-Pab-098013	Pongo abelii	97.14	4.00e-144	503.00
IUUC-Pca-100822	Procavia capensis	90.58	5.00e-119	419.00
IUUC-Pva-102936	Pteropus vampyrus	95.51	4.00e-143	499.00
IUUC-Rno-106110	Rattus norvegicus	58.12	9.00e-74	269.00
IUUC-Sha-107403	Sarcophilus harrisii	91.96	9.00e-112	395.00
IUUC-Sar-113678	Sorex araneus	92.77	1.00e-44	172.00
IUUC-Ssc-116192	Sus scrofa	97.96	2.00e-145	507.00
IUUC-Tgu-116820	Taeniopygia guttata	70.64	3.00e-97	347.00
IUUC-Tsy-119211	Tarsius syrichta	79.81	3.00e-93	333.00
IUUC-Tbe-127480	Tupaia belangeri	60.00	1.00e-75	275.00
IUUC-Ttr-128859	Tursiops truncatus	97.14	7.00e-145	505.00
IUUC-Vda-129783	Verticillium dahliae	46.94	6.00e-09	55.50
IUUC-Vpa-130682	Vicugna pacos	92.24	1.00e-131	461.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence