iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000063535.8	ENSDART00000130062.2	ENSDARP00000111640.2
ENSDARG00000063535.8	ENSDART00000005453.8	ENSDARP00000014790.7

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.40e-16	60.6	431	475

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e wiCp+C+
   Q: 431  EFCRVCKDGGE----LLCCDSCPSSYHIHCLNPP-LPEIPNGE-WICPRCT 475
           58*********....*******************.*******8.******6 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSGSEDDRDD FEHRSVMQEE DDLEEELSEN DAPKVKKKKK AKKSSRESKG SKRNRSRREE 60
IGISSPEPGE GPDLDDGEED RSESEGSDYT PGRKKKKRAS TAKDKKRNSS AAERNSAASK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGTCTGTA TGTATGTGTA TGTGTGAATA TGGGGAGGGA GATTATTATG GGATGTCTGG 60
CCCCTGATCT CTTTGTGTCT ATGCAAAGGG TGTAAGTGGC AGAAGGAGAA ACTGCGACGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0031101--P:fin regeneration
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001361	Ailuropoda melanoleuca	77.95	0.00e+00	2363.00
IUUC-Aca-004774	Anolis carolinensis	78.62	0.00e+00	2516.00
IUUC-Ame-011098	Astyanax mexicanus	84.93	0.00e+00	2789.00
IUUC-Cel-018108	Caenorhabditis elegans	58.46	0.00e+00	1339.00
IUUC-Cho-024361	Choloepus hoffmanni	80.98	0.00e+00	1334.00
IUUC-Cin-025596	Ciona intestinalis	52.88	7.00e-62	231.00
IUUC-Csv-025847	Ciona savignyi	60.54	0.00e+00	1367.00
IUUC-Dno-029656	Dasypus novemcinctus	86.32	0.00e+00	1956.00
IUUC-Dme-032150	Drosophila melanogaster	61.82	0.00e+00	1419.00
IUUC-Gga-040216	Gallus gallus	79.74	0.00e+00	2523.00
IUUC-Ggo-044428	Gorilla gorilla	72.68	0.00e+00	2077.00
IUUC-Lch-049948	Latimeria chalumnae	78.44	0.00e+00	1671.00
IUUC-Loc-052144	Lepisosteus oculatus	89.41	0.00e+00	2199.00
IUUC-Mcc-055773	Macaca mulatta	83.78	0.00e+00	1957.00
IUUC-Mmr-060886	Microcebus murinus	83.29	0.00e+00	1960.00
IUUC-Mmu-063672	Mus musculus	86.07	0.00e+00	1966.00
IUUC-Ont-072418	Oreochromis niloticus	81.87	0.00e+00	2647.00
IUUC-Ola-086880	Oryzias latipes	84.49	0.00e+00	2323.00
IUUC-Pan-092441	Papio anubis	86.66	0.00e+00	1962.00
IUUC-Psi-093530	Pelodiscus sinensis	84.25	0.00e+00	2137.00
IUUC-Pfo-097530	Poecilia formosa	82.91	0.00e+00	2685.00
IUUC-Pva-103186	Pteropus vampyrus	83.86	0.00e+00	1939.00
IUUC-Sly-110976	Solanum lycopersicum	43.26	0.00e+00	735.00
IUUC-Tgu-117484	Taeniopygia guttata	76.88	0.00e+00	2512.00
IUUC-Tru-118745	Takifugu rubripes	79.52	0.00e+00	2688.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence