iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093914

Ensembl Protein ID

ENSPSIP00000001304.1

UniProt Accession

K7EZU4; K7EZU4_PELSI

Genbank Protein ID

ENSPSIP00000001304

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01073991

Gene Name

TRIM13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000001307.1	ENSPSIT00000001306.1	ENSPSIP00000001304.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-08	34.2	10	59

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw........pglknssskefrCPlCr 46
           C+iC+  f+d p+vlpC H f+++Cl+ +        + +     + f+CP+Cr
   Q: 10   CPICCGLFDD-PRVLPCSHNFCKKCLEGIlegnvrsvVWR---PPPLFKCPTCR 59
           **********.***************88844444443222...245566****8 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MELLEEDLTC PICCGLFDDP RVLPCSHNFC KKCLEGILEG NVRSVVWRPP PLFKCPTCRK 60
ETPVTGINNL QVNYSLKGIV EKYNKIKVTP KMPMCKVHSG QPLNIFCRTD MQLICGICAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCTCT TAGAGGAAGA CCTCACCTGT CCCATTTGTT GTGGCTTGTT TGATGATCCT 60
CGGGTTTTAC CTTGTTCTCA CAACTTTTGC AAGAAGTGTT TGGAGGGAAT CCTAGAGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0097038--C:perinuclear endoplasmic reticulum
GO:0004871--F:signal transducer activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045087--P:innate immune response
GO:1902187--P:negative regulation of viral release from host cell
GO:0032897--P:negative regulation of viral transcription
GO:0010942--P:positive regulation of cell death
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0016239--P:positive regulation of macroautophagy
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0051865--P:protein autoubiquitination
GO:0010332--P:response to gamma radiation
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

pss:102455961

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002269	Ailuropoda melanoleuca	74.82	4.00e-174	603.00
IUUC-Apl-004168	Anas platyrhynchos	89.98	0.00e+00	739.00
IUUC-Aca-004395	Anolis carolinensis	79.71	0.00e+00	662.00
IUUC-Ame-011325	Astyanax mexicanus	46.95	7.00e-66	244.00
IUUC-Bta-012613	Bos taurus	75.31	6.00e-175	606.00
IUUC-Bdi-014689	Brachypodium distachyon	42.37	5.00e-06	44.70
IUUC-Cja-018856	Callithrix jacchus	75.61	0.00e+00	634.00
IUUC-Cfa-021019	Canis familiaris	75.06	1.00e-172	598.00
IUUC-Cpo-021845	Cavia porcellus	75.31	1.00e-173	602.00
IUUC-Csa-023380	Chlorocebus sabaeus	76.28	8.00e-177	612.00
IUUC-Cho-024733	Choloepus hoffmanni	63.51	3.00e-67	248.00
IUUC-Dre-028675	Danio rerio	52.33	1.00e-115	409.00
IUUC-Dno-030018	Dasypus novemcinctus	75.31	7.00e-180	622.00
IUUC-Dor-030599	Dipodomys ordii	71.38	2.00e-100	357.00
IUUC-Ete-033134	Echinops telfairi	75.06	0.00e+00	627.00
IUUC-Eca-033931	Equus caballus	75.06	1.00e-172	598.00
IUUC-Eeu-034903	Erinaceus europaeus	74.82	2.00e-172	597.00
IUUC-Fca-035642	Felis catus	75.79	1.00e-173	602.00
IUUC-Fal-037108	Ficedula albicollis	89.98	0.00e+00	771.00
IUUC-Gga-040903	Gallus gallus	89.03	0.00e+00	757.00
IUUC-Ggo-044635	Gorilla gorilla	75.79	1.00e-176	612.00
IUUC-Hsa-046345	Homo sapiens	75.79	1.00e-176	611.00
IUUC-Itr-048220	Ictidomys tridecemlineatus	75.73	2.00e-168	584.00
IUUC-Lch-050599	Latimeria chalumnae	64.60	3.00e-152	531.00
IUUC-Lpe-051499	Leersia perrieri	43.64	2.00e-07	49.70
IUUC-Loc-052378	Lepisosteus oculatus	65.15	2.00e-119	421.00
IUUC-Laf-053332	Loxodonta africana	76.04	3.00e-179	620.00
IUUC-Mcc-054705	Macaca mulatta	75.79	4.00e-176	610.00
IUUC-Meu-056825	Macropus eugenii	75.55	0.00e+00	639.00
IUUC-Mga-059528	Meleagris gallopavo	89.49	0.00e+00	774.00
IUUC-Mmr-060688	Microcebus murinus	75.79	2.00e-174	604.00
IUUC-Mdo-061882	Monodelphis domestica	74.82	0.00e+00	636.00
IUUC-Mmu-064352	Mus musculus	73.72	1.00e-175	608.00
IUUC-Mpu-066712	Mustela putorius furo	75.00	3.00e-160	557.00
IUUC-Mlu-068093	Myotis lucifugus	74.33	2.00e-171	595.00
IUUC-Nle-069310	Nomascus leucogenys	75.55	1.00e-175	608.00
IUUC-Ont-071759	Oreochromis niloticus	60.13	4.00e-113	400.00
IUUC-Oan-073673	Ornithorhynchus anatinus	74.33	0.00e+00	643.00
IUUC-Ocu-074192	Oryctolagus cuniculus	75.31	5.00e-176	609.00
IUUC-Oba-075404	Oryza barthii	42.11	2.00e-07	50.10
IUUC-Obr-076671	Oryza brachyantha	43.64	9.00e-08	50.80
IUUC-Ogl-076954	Oryza glaberrima	42.11	2.00e-07	50.10
IUUC-Ola-087424	Oryzias latipes	58.95	8.00e-113	400.00
IUUC-Oga-088808	Otolemur garnettii	75.55	4.00e-175	607.00
IUUC-Oar-089553	Ovis aries	75.06	6.00e-175	606.00
IUUC-Ptr-090518	Pan troglodytes	75.55	3.00e-175	607.00
IUUC-Pan-092781	Papio anubis	75.79	6.00e-176	609.00
IUUC-Pfo-096346	Poecilia formosa	58.56	5.00e-111	394.00
IUUC-Pca-100914	Procavia capensis	74.82	0.00e+00	628.00
IUUC-Pva-102728	Pteropus vampyrus	74.57	5.00e-173	600.00
IUUC-Rno-105922	Rattus norvegicus	72.37	4.00e-168	583.00
IUUC-Sha-107124	Sarcophilus harrisii	75.06	0.00e+00	648.00
IUUC-Sar-113607	Sorex araneus	73.17	2.00e-165	574.00
IUUC-Ssc-116355	Sus scrofa	75.31	6.00e-176	609.00
IUUC-Tgu-116476	Taeniopygia guttata	90.22	0.00e+00	768.00
IUUC-Tru-118737	Takifugu rubripes	60.59	2.00e-112	399.00
IUUC-Tsy-118908	Tarsius syrichta	75.06	2.00e-176	611.00
IUUC-Tbe-127258	Tupaia belangeri	76.04	8.00e-177	612.00
IUUC-Vpa-130138	Vicugna pacos	74.82	4.00e-174	603.00
IUUC-Xtr-132100	Xenopus tropicalis	58.68	6.00e-139	486.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence