iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113906

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G299800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g034930	Sb03g034930.1	Sb03g034930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-08	35.0	120	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl   +dg  ++ lp CgHvfh  C+  w         + +CP+Cr
   Q: 120  CTICLGAVEDGevVRALPaCGHVFHVPCVDTW------LASSSSCPVCR 162
           9*****998877799999**************......9*********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATTTTTTTT MKASDPGSAW FGSGASRTPS AAGTGGHNAR LITTAVAAFV SVLGLALFLH 60
LYVCHVRRRN RRRAEAARAA VLPTTAAAPA KCGLDAAAIA ALPTTIYRDD VGGEAATDEC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCCACCCA GTCTTCTCTT CTCACTTCTC ACTCACCAAC CAACCGAGCA ACTTGGCTCG 60
TCGTACCTGC GACACGCCGA GGAGAGCGCG CGCGTGCTGA GGCTGAGCTG TCGGAGCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_03g034930

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003783	Anas platyrhynchos	60.71	2.00e-15	75.50
IUUC-Aca-005299	Anolis carolinensis	60.71	1.00e-15	76.30
IUUC-Aly-005547	Arabidopsis lyrata	32.78	5.00e-23	100.00
IUUC-Ath-007071	Arabidopsis thaliana	35.48	6.00e-18	83.20
IUUC-Bdi-014991	Brachypodium distachyon	61.48	2.00e-45	174.00
IUUC-Bol-016176	Brassica oleracea	35.80	2.00e-20	91.70
IUUC-Bra-016906	Brassica rapa	35.26	2.00e-19	88.60
IUUC-Cel-018118	Caenorhabditis elegans	39.24	8.00e-14	70.90
IUUC-Cja-019798	Callithrix jacchus	58.33	5.00e-16	77.40
IUUC-Cpo-022225	Cavia porcellus	58.33	6.00e-16	77.40
IUUC-Csa-024018	Chlorocebus sabaeus	58.33	5.00e-16	77.80
IUUC-Dre-027722	Danio rerio	57.41	6.00e-14	70.50
IUUC-Dno-029962	Dasypus novemcinctus	61.70	1.00e-13	69.70
IUUC-Fal-037200	Ficedula albicollis	60.34	5.00e-16	77.40
IUUC-Gmo-039613	Gadus morhua	59.26	8.00e-14	70.10
IUUC-Gga-040277	Gallus gallus	60.71	1.00e-15	76.30
IUUC-Gac-042544	Gasterosteus aculeatus	61.11	1.00e-14	73.20
IUUC-Ggo-044631	Gorilla gorilla	58.33	4.00e-16	77.80
IUUC-Hsa-046864	Homo sapiens	58.33	5.00e-16	77.40
IUUC-Hvu-047434	Hordeum vulgare	58.13	4.00e-45	173.00
IUUC-Itr-048602	Ictidomys tridecemlineatus	58.33	4.00e-16	77.80
IUUC-Lch-049656	Latimeria chalumnae	61.70	7.00e-14	70.50
IUUC-Lpe-051043	Leersia perrieri	57.87	1.00e-35	142.00
IUUC-Loc-052046	Lepisosteus oculatus	56.90	8.00e-15	73.60
IUUC-Laf-053554	Loxodonta africana	60.38	1.00e-14	71.60
IUUC-Mcc-055198	Macaca mulatta	58.33	4.00e-16	77.80
IUUC-Meu-055988	Macropus eugenii	61.70	1.00e-13	69.70
IUUC-Mga-059245	Meleagris gallopavo	60.71	6.00e-16	75.90
IUUC-Mmr-061389	Microcebus murinus	61.70	1.00e-13	69.70
IUUC-Mdo-062317	Monodelphis domestica	61.70	1.00e-13	69.70
IUUC-Mmu-063102	Mus musculus	58.33	5.00e-16	77.80
IUUC-Mac-065470	Musa acuminata	46.35	2.00e-27	115.00
IUUC-Mpu-066793	Mustela putorius furo	61.70	1.00e-13	70.10
IUUC-Nle-069235	Nomascus leucogenys	58.33	1.00e-15	76.60
IUUC-Opr-070646	Ochotona princeps	61.70	9.00e-14	70.10
IUUC-Ont-072005	Oreochromis niloticus	55.93	5.00e-15	74.30
IUUC-Oan-072924	Ornithorhynchus anatinus	61.70	9.00e-14	70.10
IUUC-Ocu-074718	Oryctolagus cuniculus	58.33	5.00e-16	77.40
IUUC-Oba-075575	Oryza barthii	62.50	5.00e-52	196.00
IUUC-Ogl-077104	Oryza glaberrima	62.50	5.00e-52	196.00
IUUC-Oin-079390	Oryza indica	62.50	5.00e-52	196.00
IUUC-Oni-082882	Oryza nivara	62.50	5.00e-52	196.00
IUUC-Oru-084452	Oryza rufipogon	61.64	3.00e-52	197.00
IUUC-Osa-085457	Oryza sativa	62.50	2.00e-52	197.00
IUUC-Olu-087904	Ostreococcus lucimarinus	44.16	2.00e-12	62.80
IUUC-Oga-087993	Otolemur garnettii	58.33	5.00e-16	77.80
IUUC-Ptr-091341	Pan troglodytes	58.33	5.00e-16	77.40
IUUC-Pan-091775	Papio anubis	58.33	5.00e-16	77.40
IUUC-Psi-092966	Pelodiscus sinensis	60.71	1.00e-15	76.30
IUUC-Pfo-096298	Poecilia formosa	61.11	9.00e-15	73.20
IUUC-Rno-105973	Rattus norvegicus	58.33	4.00e-16	77.80
IUUC-Sha-107027	Sarcophilus harrisii	61.70	1.00e-13	69.70
IUUC-Sit-110606	Setaria italica	79.58	6.00e-89	319.00
IUUC-Sly-111845	Solanum lycopersicum	31.90	4.00e-24	103.00
IUUC-Stu-112253	Solanum tuberosum	34.84	7.00e-27	112.00
IUUC-Sar-113383	Sorex araneus	61.70	9.00e-14	70.10
IUUC-Tgu-117345	Taeniopygia guttata	60.34	5.00e-16	77.40
IUUC-Tru-118756	Takifugu rubripes	61.11	9.00e-15	73.60
IUUC-Tni-120104	Tetraodon nigroviridis	57.63	7.00e-16	77.00
IUUC-Tae-124486	Triticum aestivum	60.66	2.00e-47	181.00
IUUC-Vpa-130177	Vicugna pacos	62.75	1.00e-14	71.60
IUUC-Xtr-132317	Xenopus tropicalis	61.70	7.00e-14	70.50
IUUC-Xma-133756	Xiphophorus maculatus	61.11	1.00e-14	73.20
IUUC-Yli-134336	Yarrowia lipolytica	40.79	3.00e-11	63.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence