• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105696
UUCD1 version UUC-RaN-00849
Ensembl Protein ID ENSRNOP00000017125.5
UniProt Accession Q5PQN5; TRI55_RAT
Genbank Protein ID AAH87100.1
Protein Name Tripartite motif-containing protein 55; Muscle-specific RING finger protein 2; RING finger protein 29
Genbank Nucleotide ID BC087100
Gene Name Trim55; Murf2; Rnf29
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000012723.5 ENSRNOT00000017125.5 ENSRNOP00000017125.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNATRANSFACmiRNAMapRAID2
Protein-protein Interaction
IIDMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 1.10e-08 35.9 26 82
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C   +            g    s ++frCP Cr
   Q: 26   CPICLEMFTKPVVILPCQHNLCRKCASDIfqasnpylptrGGTTVASGGRFRCPSCR 82
           *************************744445557779999888889**********8 PP
   
Organism Rattus norvegicus
Functional Description
(View)

Functional Description


     May regulate gene expression and protein turnover in muscle cells.
 May regulate gene expression and protein turnover in muscle cells.
Protein Sequence
(Fasta)
MSTSLNYKSF SKEQQTMDNL EKQLICPICL EMFTKPVVIL PCQHNLCRKC ASDIFQASNP 60
YLPTRGGTTV ASGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESTRPEKKLD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105696|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTCCTCCACA GAGAGGGACG TAAAGGACAC TTGATCATTA CAGTCCTTGG AATTACTTCC 60
AGGAAACACT TCCAGAAGCC GTTCGGGAGC ACCCTTCCCC TGGCGGCACA CCCAGGGACG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105696|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0479--Metal-binding
KW-0514--Muscle protein
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX
SMART

SM00336--BBOX
SM00184--RING
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
KEGG rno:365751
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002421 Ailuropoda melanoleuca 83.39 0.00e+00 827.00
IUUC-Apl-003341 Anas platyrhynchos 76.05 0.00e+00 679.00
IUUC-Aca-005384 Anolis carolinensis 71.43 1.00e-174 606.00
IUUC-Ame-010720 Astyanax mexicanus 72.15 7.00e-140 489.00
IUUC-Bta-013040 Bos taurus 80.47 0.00e+00 788.00
IUUC-Cja-019932 Callithrix jacchus 83.94 0.00e+00 815.00
IUUC-Cfa-020450 Canis familiaris 83.27 0.00e+00 842.00
IUUC-Cpo-021767 Cavia porcellus 81.68 0.00e+00 837.00
IUUC-Csa-023600 Chlorocebus sabaeus 82.07 0.00e+00 821.00
IUUC-Cho-024753 Choloepus hoffmanni 72.21 0.00e+00 679.00
IUUC-Dre-028701 Danio rerio 71.20 6.00e-139 486.00
IUUC-Dno-030008 Dasypus novemcinctus 80.65 0.00e+00 799.00
IUUC-Ete-032274 Echinops telfairi 74.09 0.00e+00 717.00
IUUC-Eca-034326 Equus caballus 83.06 0.00e+00 791.00
IUUC-Fca-035385 Felis catus 82.19 0.00e+00 766.00
IUUC-Fal-036679 Ficedula albicollis 89.84 1.00e-176 612.00
IUUC-Gmo-039021 Gadus morhua 64.87 3.00e-119 421.00
IUUC-Gga-040576 Gallus gallus 89.52 3.00e-174 604.00
IUUC-Gac-042165 Gasterosteus aculeatus 66.87 4.00e-133 467.00
IUUC-Ggo-044496 Gorilla gorilla 82.73 0.00e+00 805.00
IUUC-Hsa-046337 Homo sapiens 82.91 0.00e+00 805.00
IUUC-Lch-050504 Latimeria chalumnae 64.55 2.00e-180 625.00
IUUC-Loc-052717 Lepisosteus oculatus 55.61 6.00e-160 557.00
IUUC-Laf-053838 Loxodonta africana 77.33 0.00e+00 795.00
IUUC-Mcc-054690 Macaca mulatta 82.00 0.00e+00 794.00
IUUC-Meu-056782 Macropus eugenii 65.76 1.00e-178 619.00
IUUC-Mga-060112 Meleagris gallopavo 88.96 1.00e-173 602.00
IUUC-Mmr-061229 Microcebus murinus 80.92 0.00e+00 803.00
IUUC-Mdo-062397 Monodelphis domestica 72.88 0.00e+00 704.00
IUUC-Mmu-063764 Mus musculus 93.39 0.00e+00 907.00
IUUC-Mpu-066503 Mustela putorius furo 83.36 0.00e+00 834.00
IUUC-Mlu-068160 Myotis lucifugus 95.35 1.00e-98 351.00
IUUC-Nle-069170 Nomascus leucogenys 82.33 0.00e+00 808.00
IUUC-Ont-072082 Oreochromis niloticus 68.79 6.00e-133 466.00
IUUC-Oan-072715 Ornithorhynchus anatinus 91.03 1.00e-176 612.00
IUUC-Ocu-074747 Oryctolagus cuniculus 81.14 0.00e+00 747.00
IUUC-Ola-086646 Oryzias latipes 64.63 6.00e-128 450.00
IUUC-Oga-087995 Otolemur garnettii 82.70 0.00e+00 818.00
IUUC-Oar-089844 Ovis aries 80.66 0.00e+00 797.00
IUUC-Ptr-091556 Pan troglodytes 82.73 0.00e+00 803.00
IUUC-Pan-092224 Papio anubis 82.36 0.00e+00 795.00
IUUC-Psi-093856 Pelodiscus sinensis 70.51 0.00e+00 717.00
IUUC-Pma-094534 Petromyzon marinus 54.46 4.00e-100 357.00
IUUC-Pfo-096596 Poecilia formosa 61.83 2.00e-129 455.00
IUUC-Pca-100510 Procavia capensis 75.14 0.00e+00 774.00
IUUC-Pva-102962 Pteropus vampyrus 80.65 0.00e+00 743.00
IUUC-Sha-106825 Sarcophilus harrisii 73.95 0.00e+00 723.00
IUUC-Ssc-116332 Sus scrofa 80.22 0.00e+00 769.00
IUUC-Tgu-117208 Taeniopygia guttata 89.52 5.00e-177 613.00
IUUC-Tru-118744 Takifugu rubripes 66.15 3.00e-131 461.00
IUUC-Tsy-119352 Tarsius syrichta 78.92 0.00e+00 797.00
IUUC-Tni-120413 Tetraodon nigroviridis 67.73 2.00e-129 455.00
IUUC-Tbe-127821 Tupaia belangeri 98.51 8.00e-122 430.00
IUUC-Ttr-128545 Tursiops truncatus 82.57 0.00e+00 759.00
IUUC-Vpa-130699 Vicugna pacos 94.21 0.00e+00 658.00
IUUC-Xtr-132207 Xenopus tropicalis 63.71 0.00e+00 627.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved