iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129842

Ensembl Protein ID

EGY22993

UniProt Accession

G2X2A7; G2X2A7_VERDV

Genbank Protein ID

EGY22993.1

Protein Name

U4/U6 small nuclear ribonucleoprotein Prp4

Genbank Nucleotide ID

DS572701

Gene Name

VDAG_04431

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_04431	EGY22993	EGY22993

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-34	114.4	234	282
UBD/Beta-Prp	4.30e-54	182.8	194	424

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf............sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+++++l++            +d   l+sG+  gt+ +W+l ++++l
   Q: 234  GHTNKISGLSWypgstlpecnvsPDsVNLASGGAEGTVNLWSLNQDTPL 282
           8***********88777777776665559*************9998876 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheae...........vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           +  ++    sp++++ a+g + g +k+ ++ + +    l gh+++              ++ spd+  l++g+  +t+++w+l++ ++++tl+gh+++v+ 
   Q: 194  DRHVSMTRLSPNGEIAAVGNWGGAVKLLEIPSLTEKMNLRGHTNKisglswypgstLPECNVSPDSVNLASGGAEGTVNLWSLNQDTPLSTLQGHSARVCR 294
           44555566799*****************999988889999***998888888888888888899988********************************** PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsl 200
           ++f+psg++l+s+s+d t r+wd+et  ++  +++gh++ v  v++++dg+ll+s++lD++ r+Wdl++g+ +  l + h ++++ l++  +g ++++gs 
   Q: 295  VEFHPSGKYLASASEDTTWRLWDIETTAEVL-LQEGHSRGVYAVSFNSDGSLLASAGLDSIGRIWDLRSGRTVMILDE-HIKPIHALDWGADGHRVLTGSA 393
           *******************************.********************************************99.********************** PP
   S: 201  dgtvklwdlqtgecvrtlnghtdnvksvrfs 231
           dg +k wd+++ +    l +ht+ v+++r +
   Q: 394  DGWIKCWDVRKVQRTGGLGAHTSAVSDLRWF 424
           ***********999***********999876 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MMHPSRQAYV EEMDDDRGIA LEDVPLDHDY EIPSASAGVA PEKASAVMAQ FERKRLAASI 60
AVPTDDGRVR AKLRELGEPV TLFGEGPAER RDRLRQLLAI QKELAGLEDG DVDMEDAGDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGCACC CGTCGCGCCA GGCGTATGTG GAGGAGATGG ACGACGACCG GGGGATAGCT 60
CTCGAGGATG TTCCCCTCGA TCACGATTAC GAGATCCCTT CCGCCTCCGC TGGTGTCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

KEGG

vda:VDAG_04431

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	38.10	2.00e-80	291.00
IUUC-Aml-001737	Ailuropoda melanoleuca	37.77	8.00e-94	335.00
IUUC-Atr-002828	Amborella trichopoda	36.42	9.00e-81	292.00
IUUC-Apl-003723	Anas platyrhynchos	38.41	1.00e-94	338.00
IUUC-Aca-004972	Anolis carolinensis	37.90	2.00e-93	334.00
IUUC-Aly-006531	Arabidopsis lyrata	35.53	3.00e-66	244.00
IUUC-Ath-007367	Arabidopsis thaliana	36.94	2.00e-80	291.00
IUUC-Ago-007893	Ashbya gossypii	37.12	1.00e-71	261.00
IUUC-Acl-008236	Aspergillus clavatus	60.63	8.00e-173	598.00
IUUC-Afl-008522	Aspergillus flavus	62.48	4.00e-178	615.00
IUUC-Afu-008904	Aspergillus fumigatus	60.45	7.00e-174	601.00
IUUC-Ani-009198	Aspergillus nidulans	63.01	0.00e+00	638.00
IUUC-Ang-009662	Aspergillus niger	60.85	2.00e-175	606.00
IUUC-Aor-009881	Aspergillus oryzae	61.41	3.00e-178	616.00
IUUC-Ate-010333	Aspergillus terreus	60.87	1.00e-165	574.00
IUUC-Ame-011697	Astyanax mexicanus	39.19	7.00e-97	345.00
IUUC-Bgr-012254	Blumeria graminis	67.31	0.00e+00	688.00
IUUC-Bta-012615	Bos taurus	37.77	4.00e-94	337.00
IUUC-Bci-013720	Botrytis cinerea	69.25	0.00e+00	717.00
IUUC-Bdi-014302	Brachypodium distachyon	38.56	5.00e-83	299.00
IUUC-Bol-015594	Brassica oleracea	35.77	6.00e-70	256.00
IUUC-Bra-017465	Brassica rapa	36.63	8.00e-70	256.00
IUUC-Cel-018632	Caenorhabditis elegans	35.35	5.00e-75	273.00
IUUC-Cja-019747	Callithrix jacchus	37.77	5.00e-94	336.00
IUUC-Cfa-020288	Canis familiaris	37.77	7.00e-94	335.00
IUUC-Cpo-021440	Cavia porcellus	37.47	4.00e-94	337.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	35.70	3.00e-57	213.00
IUUC-Csa-023139	Chlorocebus sabaeus	35.59	6.00e-70	255.00
IUUC-Cho-024481	Choloepus hoffmanni	36.48	7.00e-87	312.00
IUUC-Cin-025106	Ciona intestinalis	36.03	1.00e-85	308.00
IUUC-Csv-026087	Ciona savignyi	36.23	2.00e-86	311.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	82.95	0.00e+00	873.00
IUUC-Cne-026793	Cryptococcus neoformans	42.16	1.00e-108	385.00
IUUC-Dre-028723	Danio rerio	39.26	2.00e-94	337.00
IUUC-Dno-029299	Dasypus novemcinctus	37.77	1.00e-93	335.00
IUUC-Dse-031562	Dothistroma septosporum	55.81	6.00e-166	575.00
IUUC-Dme-031783	Drosophila melanogaster	36.93	2.00e-76	278.00
IUUC-Ete-032669	Echinops telfairi	38.20	1.00e-94	338.00
IUUC-Eca-033566	Equus caballus	37.77	8.00e-94	335.00
IUUC-Eeu-034524	Erinaceus europaeus	40.85	2.00e-56	211.00
IUUC-Fca-036215	Felis catus	37.77	6.00e-94	336.00
IUUC-Fal-037018	Ficedula albicollis	39.79	2.00e-81	294.00
IUUC-Fox-037936	Fusarium oxysporum	80.00	0.00e+00	824.00
IUUC-Fso-038366	Fusarium solani	81.12	0.00e+00	867.00
IUUC-Gmo-038966	Gadus morhua	32.89	1.00e-56	211.00
IUUC-Ggr-039942	Gaeumannomyces graminis	70.91	0.00e+00	738.00
IUUC-Gga-040797	Gallus gallus	38.41	1.00e-94	338.00
IUUC-Gac-042598	Gasterosteus aculeatus	36.05	5.00e-78	283.00
IUUC-Gma-044220	Glycine max	37.83	6.00e-77	279.00
IUUC-Ggo-044682	Gorilla gorilla	37.98	8.00e-95	338.00
IUUC-Hsa-045804	Homo sapiens	37.98	4.00e-95	340.00
IUUC-Hvu-047567	Hordeum vulgare	36.64	5.00e-75	273.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	37.55	1.00e-93	334.00
IUUC-Kpa-049369	Komagataella pastoris	36.15	5.00e-67	246.00
IUUC-Lch-050074	Latimeria chalumnae	35.90	5.00e-83	299.00
IUUC-Lpe-051333	Leersia perrieri	38.41	3.00e-77	280.00
IUUC-Loc-052164	Lepisosteus oculatus	38.63	4.00e-95	340.00
IUUC-Lma-053088	Leptosphaeria maculans	57.85	1.00e-168	583.00
IUUC-Laf-053460	Loxodonta africana	37.77	5.00e-94	336.00
IUUC-Mcc-055859	Macaca mulatta	37.77	6.00e-94	336.00
IUUC-Meu-056134	Macropus eugenii	37.77	6.00e-95	339.00
IUUC-Mor-057251	Magnaporthe oryzae	70.38	0.00e+00	705.00
IUUC-Mpo-057375	Magnaporthe poae	77.52	2.00e-120	423.00
IUUC-Mtr-058546	Medicago truncatula	35.54	4.00e-73	266.00
IUUC-Mla-059145	Melampsora laricipopulina	46.35	2.00e-107	380.00
IUUC-Mga-059855	Meleagris gallopavo	38.41	1.00e-94	338.00
IUUC-Mvi-060372	Microbotryum violaceum	40.10	4.00e-82	296.00
IUUC-Mmr-060826	Microcebus murinus	38.20	3.00e-94	337.00
IUUC-Mdo-062748	Monodelphis domestica	37.98	7.00e-95	339.00
IUUC-Mmu-063351	Mus musculus	37.77	7.00e-94	335.00
IUUC-Mac-064846	Musa acuminata	35.65	4.00e-72	263.00
IUUC-Mpu-066006	Mustela putorius furo	37.77	6.00e-94	336.00
IUUC-Mlu-067398	Myotis lucifugus	38.54	8.00e-94	335.00
IUUC-Nfi-068399	Neosartorya fischeri	60.49	0.00e+00	631.00
IUUC-Ncr-068711	Neurospora crassa	75.14	0.00e+00	802.00
IUUC-Nle-069982	Nomascus leucogenys	37.77	5.00e-94	336.00
IUUC-Opr-070596	Ochotona princeps	37.77	7.00e-94	335.00
IUUC-Ont-072374	Oreochromis niloticus	39.06	1.00e-83	301.00
IUUC-Oan-073166	Ornithorhynchus anatinus	36.15	3.00e-75	273.00
IUUC-Ocu-074371	Oryctolagus cuniculus	37.77	8.00e-94	335.00
IUUC-Oba-075083	Oryza barthii	37.01	1.00e-79	288.00
IUUC-Obr-076405	Oryza brachyantha	38.85	4.00e-78	283.00
IUUC-Ogl-077683	Oryza glaberrima	37.22	4.00e-80	290.00
IUUC-Ogu-078486	Oryza glumaepatula	37.14	1.00e-79	288.00
IUUC-Oin-079679	Oryza indica	37.22	5.00e-82	296.00
IUUC-Olo-080243	Oryza longistaminata	36.13	1.00e-66	244.00
IUUC-Ome-081230	Oryza meridionalis	37.14	4.00e-82	296.00
IUUC-Oni-082961	Oryza nivara	37.14	3.00e-82	297.00
IUUC-Opu-083189	Oryza punctata	37.14	1.00e-80	291.00
IUUC-Oru-084353	Oryza rufipogon	37.99	4.00e-80	290.00
IUUC-Osa-085458	Oryza sativa	37.14	4.00e-82	296.00
IUUC-Ola-086940	Oryzias latipes	39.70	1.00e-89	321.00
IUUC-Olu-087580	Ostreococcus lucimarinus	33.20	2.00e-51	194.00
IUUC-Oga-088703	Otolemur garnettii	36.05	3.00e-85	307.00
IUUC-Oar-089829	Ovis aries	37.77	1.00e-93	335.00
IUUC-Ptr-090838	Pan troglodytes	37.98	4.00e-95	340.00
IUUC-Pan-092261	Papio anubis	37.69	2.00e-92	330.00
IUUC-Psi-093020	Pelodiscus sinensis	37.34	3.00e-94	337.00
IUUC-Pma-094595	Petromyzon marinus	27.95	1.00e-29	122.00
IUUC-Pno-094858	Phaeosphaeria nodorum	57.56	8.00e-158	548.00
IUUC-Ppa-095531	Physcomitrella patens	34.89	9.00e-82	295.00
IUUC-Pfo-096812	Poecilia formosa	35.03	9.00e-67	245.00
IUUC-Pab-097805	Pongo abelii	36.53	3.00e-69	254.00
IUUC-Pop-100051	Populus trichocarpa	34.94	3.00e-76	277.00
IUUC-Pca-100152	Procavia capensis	37.77	6.00e-94	336.00
IUUC-Ppe-101244	Prunus persica	36.19	3.00e-75	273.00
IUUC-Pva-102529	Pteropus vampyrus	36.48	2.00e-87	314.00
IUUC-Pgr-103550	Puccinia graminis	42.64	2.00e-111	394.00
IUUC-Ptt-103951	Puccinia triticina	38.74	5.00e-95	339.00
IUUC-Pte-104151	Pyrenophora teres	57.61	5.00e-163	565.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	57.80	2.00e-164	570.00
IUUC-Rno-105747	Rattus norvegicus	37.77	1.00e-93	335.00
IUUC-Sce-106418	Saccharomyces cerevisiae	33.47	4.00e-70	256.00
IUUC-Sha-107334	Sarcophilus harrisii	37.77	8.00e-95	338.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	39.09	2.00e-82	297.00
IUUC-Spo-108189	Schizosaccharomyces pombe	41.97	1.00e-95	341.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	69.44	0.00e+00	723.00
IUUC-Smo-109578	Selaginella moellendorffii	35.23	1.00e-84	305.00
IUUC-Sit-110102	Setaria italica	37.24	5.00e-82	296.00
IUUC-Sly-111668	Solanum lycopersicum	35.62	2.00e-72	265.00
IUUC-Stu-111928	Solanum tuberosum	35.17	8.00e-73	266.00
IUUC-Sar-113266	Sorex araneus	31.33	6.00e-71	259.00
IUUC-Sbi-114134	Sorghum bicolor	37.65	2.00e-82	297.00
IUUC-Sre-115114	Sporisorium reilianum	43.91	4.00e-111	392.00
IUUC-Ssc-115443	Sus scrofa	37.77	7.00e-94	335.00
IUUC-Tgu-117157	Taeniopygia guttata	37.55	3.00e-93	333.00
IUUC-Tru-118587	Takifugu rubripes	38.80	9.00e-87	312.00
IUUC-Tsy-119157	Tarsius syrichta	37.07	2.00e-75	275.00
IUUC-Tni-120427	Tetraodon nigroviridis	38.62	2.00e-89	321.00
IUUC-Tca-121368	Theobroma cacao	33.60	2.00e-76	278.00
IUUC-Tre-122074	Trichoderma reesei	78.85	0.00e+00	837.00
IUUC-Tvi-122349	Trichoderma virens	78.27	0.00e+00	835.00
IUUC-Tae-125651	Triticum aestivum	37.95	9.00e-82	295.00
IUUC-Tur-126532	Triticum urartu	40.21	1.00e-71	261.00
IUUC-Tme-126951	Tuber melanosporum	55.56	4.00e-156	542.00
IUUC-Tbe-128136	Tupaia belangeri	35.19	5.00e-82	296.00
IUUC-Ttr-129169	Tursiops truncatus	40.27	4.00e-58	216.00
IUUC-Uma-129399	Ustilago maydis	41.75	3.00e-105	373.00
IUUC-Vpa-130440	Vicugna pacos	37.77	5.00e-94	336.00
IUUC-Vvi-131075	Vitis vinifera	36.65	3.00e-76	278.00
IUUC-Xtr-132915	Xenopus tropicalis	32.63	2.00e-28	119.00
IUUC-Xma-133002	Xiphophorus maculatus	36.68	1.00e-66	244.00
IUUC-Yli-134569	Yarrowia lipolytica	35.29	6.00e-76	276.00
IUUC-Zma-135799	Zea mays	36.33	2.00e-77	281.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence