iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028473

Ensembl Protein ID

ENSDARP00000083528.5

UniProt Accession

F1QLI4; F1QLI4_DANRE

Genbank Protein ID

ENSDARP00000083528

Protein Name

WD repeat domain 74

Genbank Nucleotide ID

BX248510

Gene Name

wdr74

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000061993.5	ENSDART00000089095.5	ENSDARP00000083528.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.70e-12	46.1	180	209

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrt 32
           +v++++f  d + +v++++ ++++v+D++t
   Q: 180  WVRDISFiADsDKIVTCTGHHKVRVYDPST 209
           9*******55599**************765 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MAAKSQICSI WLGSETGILK GVSLRKKQAF NFCEMSCLSR DQEVCVMAWG DPYESELLLG 60
SVNGTVKTFS TDKGIFTATK ECGDPSQGKF TGLAVTDSSM ITCVESGLLK VWKEGSTDTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAACTAAA AGTTCAGTTT GTAAGTTACA CCCGGACAGA ATTGTGTGTG ACAGTAGCGT 60
GGTTGTGTTT TCATTAAACT AGAAACTACA GAATTAATCG TTTCCACTGA AATGGCTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0030687--C:preribosome, large subunit precursor
GO:0042273--P:ribosomal large subunit biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000787	Aegilops tauschii	36.09	2.00e-24	107.00
IUUC-Aml-001460	Ailuropoda melanoleuca	51.05	2.00e-106	379.00
IUUC-Atr-002657	Amborella trichopoda	36.87	5.00e-28	119.00
IUUC-Aly-006380	Arabidopsis lyrata	40.57	4.00e-29	122.00
IUUC-Ath-007686	Arabidopsis thaliana	39.43	5.00e-28	119.00
IUUC-Ame-011942	Astyanax mexicanus	74.16	5.00e-156	543.00
IUUC-Bta-013382	Bos taurus	56.83	9.00e-109	386.00
IUUC-Bdi-014280	Brachypodium distachyon	34.47	1.00e-27	118.00
IUUC-Bra-017855	Brassica rapa	40.00	6.00e-29	122.00
IUUC-Cja-018933	Callithrix jacchus	54.83	5.00e-106	377.00
IUUC-Cfa-020634	Canis familiaris	50.80	6.00e-108	384.00
IUUC-Cpo-022089	Cavia porcellus	56.05	2.00e-104	372.00
IUUC-Csa-023835	Chlorocebus sabaeus	55.28	7.00e-107	380.00
IUUC-Cho-024385	Choloepus hoffmanni	47.11	1.00e-52	199.00
IUUC-Cin-025691	Ciona intestinalis	44.05	2.00e-75	275.00
IUUC-Dno-029687	Dasypus novemcinctus	50.95	6.00e-105	374.00
IUUC-Dor-030529	Dipodomys ordii	51.28	3.00e-68	252.00
IUUC-Dme-031982	Drosophila melanogaster	30.16	3.00e-34	139.00
IUUC-Ete-032407	Echinops telfairi	46.35	2.00e-61	229.00
IUUC-Eca-033792	Equus caballus	50.00	9.00e-82	297.00
IUUC-Fca-036584	Felis catus	56.21	5.00e-108	384.00
IUUC-Gmo-039064	Gadus morhua	68.57	4.00e-134	471.00
IUUC-Gac-042170	Gasterosteus aculeatus	66.46	2.00e-129	455.00
IUUC-Gma-044150	Glycine max	35.44	2.00e-28	120.00
IUUC-Ggo-044955	Gorilla gorilla	55.59	8.00e-108	383.00
IUUC-Hsa-046615	Homo sapiens	55.28	2.00e-107	382.00
IUUC-Hvu-047119	Hordeum vulgare	31.74	1.00e-26	114.00
IUUC-Itr-048987	Ictidomys tridecemlineatus	55.73	5.00e-106	377.00
IUUC-Kpa-049188	Komagataella pastoris	29.10	4.00e-16	79.30
IUUC-Lch-050396	Latimeria chalumnae	59.35	5.00e-125	441.00
IUUC-Laf-054015	Loxodonta africana	57.89	2.00e-109	389.00
IUUC-Mcc-055589	Macaca mulatta	55.28	4.00e-107	381.00
IUUC-Meu-056160	Macropus eugenii	40.97	1.00e-67	249.00
IUUC-Mtr-057719	Medicago truncatula	34.14	2.00e-31	130.00
IUUC-Mmr-060801	Microcebus murinus	55.28	1.00e-106	379.00
IUUC-Mdo-062069	Monodelphis domestica	53.70	2.00e-108	385.00
IUUC-Mmu-063487	Mus musculus	53.89	8.00e-103	367.00
IUUC-Mpu-066542	Mustela putorius furo	56.21	4.00e-108	384.00
IUUC-Mlu-067520	Myotis lucifugus	58.80	1.00e-85	309.00
IUUC-Nle-069422	Nomascus leucogenys	55.28	3.00e-107	382.00
IUUC-Opr-070402	Ochotona princeps	50.67	4.00e-58	218.00
IUUC-Ont-072078	Oreochromis niloticus	65.22	5.00e-127	447.00
IUUC-Ocu-073886	Oryctolagus cuniculus	55.83	4.00e-107	381.00
IUUC-Obr-076206	Oryza brachyantha	34.75	2.00e-30	127.00
IUUC-Ogl-077112	Oryza glaberrima	39.43	1.00e-29	124.00
IUUC-Ogu-078172	Oryza glumaepatula	37.30	3.00e-27	116.00
IUUC-Oin-080070	Oryza indica	39.43	9.00e-30	124.00
IUUC-Olo-080534	Oryza longistaminata	37.10	5.00e-27	116.00
IUUC-Ome-081869	Oryza meridionalis	37.30	9.00e-27	114.00
IUUC-Opu-083828	Oryza punctata	37.44	2.00e-27	116.00
IUUC-Oru-084690	Oryza rufipogon	37.30	2.00e-27	117.00
IUUC-Ola-087342	Oryzias latipes	64.86	1.00e-120	426.00
IUUC-Oga-088865	Otolemur garnettii	56.69	5.00e-107	381.00
IUUC-Oar-090030	Ovis aries	56.21	3.00e-108	385.00
IUUC-Pan-092461	Papio anubis	55.28	4.00e-107	381.00
IUUC-Psi-093061	Pelodiscus sinensis	56.42	1.00e-121	429.00
IUUC-Pma-094281	Petromyzon marinus	58.63	2.00e-108	385.00
IUUC-Ppa-095623	Physcomitrella patens	40.31	1.00e-35	144.00
IUUC-Pfo-097074	Poecilia formosa	66.36	3.00e-120	425.00
IUUC-Pab-098290	Pongo abelii	55.28	2.00e-107	382.00
IUUC-Pop-099602	Populus trichocarpa	34.68	7.00e-30	124.00
IUUC-Pca-100383	Procavia capensis	57.37	1.00e-107	383.00
IUUC-Ppe-101867	Prunus persica	30.92	1.00e-32	134.00
IUUC-Pva-103218	Pteropus vampyrus	44.10	8.00e-77	280.00
IUUC-Rno-105494	Rattus norvegicus	54.15	6.00e-102	363.00
IUUC-Sha-107127	Sarcophilus harrisii	51.56	2.00e-104	372.00
IUUC-Sit-110466	Setaria italica	32.65	7.00e-28	118.00
IUUC-Sbi-113854	Sorghum bicolor	33.06	2.00e-28	120.00
IUUC-Ssc-116144	Sus scrofa	56.52	2.00e-108	385.00
IUUC-Tru-118516	Takifugu rubripes	65.12	7.00e-130	457.00
IUUC-Tni-120527	Tetraodon nigroviridis	67.51	2.00e-130	458.00
IUUC-Tae-123391	Triticum aestivum	31.74	9.00e-27	115.00
IUUC-Tur-126054	Triticum urartu	31.08	7.00e-27	115.00
IUUC-Tbe-127232	Tupaia belangeri	41.43	1.00e-68	253.00
IUUC-Ttr-128529	Tursiops truncatus	56.07	1.00e-106	379.00
IUUC-Vpa-130703	Vicugna pacos	69.23	2.00e-45	176.00
IUUC-Vvi-131680	Vitis vinifera	37.37	1.00e-30	127.00
IUUC-Xtr-132802	Xenopus tropicalis	49.87	5.00e-95	341.00
IUUC-Xma-133396	Xiphophorus maculatus	56.13	2.00e-101	362.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence