iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121550

Ensembl Protein ID

EOX99569

UniProt Accession

A0A061E3G0; A0A061E3G0_THECC

Genbank Protein ID

EOX99567.1; EOX99569.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001880; CM001880

Gene Name

TCM_008268

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_008268	EOX99569	EOX99569
TCM_008268	EOX99571	EOX99571
TCM_008268	EOX99568	EOX99568

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-20	73.9	263	329
E3 activity/RING/RING	5.20e-06	27.8	266	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
            f+Cp+ +e+M dPv + +G++++r++I+++++sg+k cP +r++l++ +l+Pn  lr+ i++w ++
   Q: 263  SFICPLCNEMMLDPVAVFCGHSFERKAIQQYFNSGKKNCPSCREELQSLELTPNVNLRSSIEEWKKR 329
           69**************************************************************876 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C e++ d p+ + CgH f ++ +q++     + s++ +CP Cr
   Q: 266  CPLCNEMMLD-PVAVFCGHSFERKAIQQY-----FNSGKKNCPSCR 305
           ******9999.9999**************.....8999999****8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSSMDYRFGI EDVGVAILQE LWNRVALQTV ELAKETRDVV LEKDSFREFS RSVSELNTLL 60
QALNVRKIEA AMGSEFTKAA LEKLNGQLRK ALKIIKDCKS GSRLRFLLHS HSVLSQMQAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCGTCATTT CAAATCGTCA ACGGATTCCT CCAATCTCTT TTAAAGAATT CTTTTGCAGG 60
CGAACCCGGC AACCACAGCT GCCGTCTTCC ATCAGCGTCA AGGATCAACA GACGCGGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR006911--ARM-rpt_dom
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX
PS50089--ZF_RING_2

Pfam

PF04826--Arm_2
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005274	Anolis carolinensis	30.77	2.00e-09	56.20
IUUC-Ame-011830	Astyanax mexicanus	32.22	1.00e-10	60.80
IUUC-Dre-028781	Danio rerio	29.63	6.00e-10	58.20
IUUC-Lch-049558	Latimeria chalumnae	35.62	1.00e-10	60.10
IUUC-Mmr-061369	Microcebus murinus	29.82	2.00e-10	59.30
IUUC-Mac-064728	Musa acuminata	42.98	0.00e+00	683.00
IUUC-Psi-093666	Pelodiscus sinensis	40.58	4.00e-11	60.10
IUUC-Pop-099295	Populus trichocarpa	69.14	0.00e+00	1269.00
IUUC-Ppe-101916	Prunus persica	68.80	0.00e+00	1236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence