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Tag Content
UUCD2 ID IUUC-Sbi-113997
UUCD1 version UUC-SoB-00173
Ensembl Protein ID Sb01g001920.1
UniProt Accession C5WT38; C5WT38_SORBI
Genbank Protein ID EER90557.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000760
Gene Name SORBI_001G019900
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb01g001920 Sb01g001920.1 Sb01g001920.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 31.29 1.00e-11 65.90 IUUC-Cel-018593
E3 activity/RING/RING 34.48 4.00e-23 105.00 IUUC-Hsa-046691
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MSSSSSASAV PPEDDVCSVC HDRFRIPCQA NCSHWFCGEC IIRVWHHGPA VHACKCPICR 60
RLINLLVPAA LSEQEDDPQA HRILGEIQHY NCIFGGAPRS LTQRLQDLPF FIRRLFRELM 120
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Protein Fasta Sequence


>IUUC-Sbi-113997|E3,RING|Sorghum bicolor
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Nucleotide Sequence
(Fasta)
CGCGGGCAGC GCCACGCCAA GCGCGTTCCT GCCGGGGGGC GGACACAGAG ACAGAGAGCG 60
GAAGGAGACC GGAAGGGAAA GAGATGAGCT CCTCCTCCTC GGCGTCGGCC GTGCCGCCGG 120
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Nucleotide Fasta Sequence


>IUUC-Sbi-113997|E3,RING|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
Interpro

IPR010652--DUF1232
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF06803--DUF1232
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
KEGG sbi:SORBI_01g001920
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000837 Aegilops tauschii 39.43 9.00e-37 145.00
IUUC-Aml-002276 Ailuropoda melanoleuca 35.92 9.00e-24 102.00
IUUC-Atr-003163 Amborella trichopoda 61.20 9.00e-61 224.00
IUUC-Apl-003771 Anas platyrhynchos 35.21 2.00e-19 88.60
IUUC-Aca-004706 Anolis carolinensis 36.21 8.00e-22 96.30
IUUC-Aly-006202 Arabidopsis lyrata 58.79 1.00e-48 184.00
IUUC-Ath-007325 Arabidopsis thaliana 58.24 2.00e-58 216.00
IUUC-Ame-011453 Astyanax mexicanus 38.59 1.00e-28 118.00
IUUC-Bta-013272 Bos taurus 35.21 2.00e-23 101.00
IUUC-Bdi-014259 Brachypodium distachyon 87.43 1.00e-83 300.00
IUUC-Bol-016302 Brassica oleracea 57.14 2.00e-56 210.00
IUUC-Bra-017738 Brassica rapa 57.69 8.00e-57 211.00
IUUC-Cel-018593 Caenorhabditis elegans 32.77 3.00e-18 84.70
IUUC-Cja-019253 Callithrix jacchus 35.21 6.00e-23 100.00
IUUC-Cfa-020844 Canis familiaris 35.21 4.00e-22 99.00
IUUC-Cpo-021645 Cavia porcellus 35.21 1.00e-23 102.00
IUUC-Csa-024012 Chlorocebus sabaeus 35.92 2.00e-23 102.00
IUUC-Cho-024304 Choloepus hoffmanni 37.93 1.00e-13 68.90
IUUC-Cin-025256 Ciona intestinalis 38.07 2.00e-22 99.00
IUUC-Dre-028166 Danio rerio 38.59 4.00e-25 107.00
IUUC-Dno-029494 Dasypus novemcinctus 35.21 3.00e-23 100.00
IUUC-Dor-030259 Dipodomys ordii 35.25 2.00e-22 98.60
IUUC-Ete-032614 Echinops telfairi 27.46 2.00e-12 65.10
IUUC-Eca-033557 Equus caballus 35.92 2.00e-23 101.00
IUUC-Fca-035812 Felis catus 35.21 5.00e-23 100.00
IUUC-Fal-036654 Ficedula albicollis 37.32 3.00e-24 104.00
IUUC-Gmo-039635 Gadus morhua 38.92 3.00e-27 114.00
IUUC-Gga-040345 Gallus gallus 38.03 4.00e-25 107.00
IUUC-Gac-041668 Gasterosteus aculeatus 37.30 3.00e-27 114.00
IUUC-Gma-043890 Glycine max 58.24 3.00e-52 196.00
IUUC-Ggo-045000 Gorilla gorilla 35.92 2.00e-23 102.00
IUUC-Hsa-046691 Homo sapiens 35.92 1.00e-23 102.00
IUUC-Hvu-047464 Hordeum vulgare 86.67 1.00e-80 291.00
IUUC-Itr-048988 Ictidomys tridecemlineatus 35.21 2.00e-23 102.00
IUUC-Lch-049846 Latimeria chalumnae 37.36 1.00e-21 95.10
IUUC-Loc-051785 Lepisosteus oculatus 37.78 2.00e-35 141.00
IUUC-Laf-054542 Loxodonta africana 35.21 5.00e-23 100.00
IUUC-Mcc-055234 Macaca mulatta 35.92 2.00e-23 102.00
IUUC-Meu-056544 Macropus eugenii 25.00 2.00e-05 42.00
IUUC-Mtr-057996 Medicago truncatula 53.59 3.00e-44 170.00
IUUC-Mmr-060609 Microcebus murinus 36.62 4.00e-24 103.00
IUUC-Mdo-062853 Monodelphis domestica 36.55 9.00e-24 102.00
IUUC-Mmu-064383 Mus musculus 35.97 2.00e-23 101.00
IUUC-Mac-065250 Musa acuminata 67.58 3.00e-63 233.00
IUUC-Mlu-067410 Myotis lucifugus 37.32 5.00e-25 106.00
IUUC-Nle-069537 Nomascus leucogenys 35.97 2.00e-23 100.00
IUUC-Opr-070637 Ochotona princeps 34.48 2.00e-16 78.60
IUUC-Ont-071800 Oreochromis niloticus 37.70 1.00e-27 115.00
IUUC-Oan-073190 Ornithorhynchus anatinus 38.89 4.00e-25 107.00
IUUC-Ocu-073899 Oryctolagus cuniculus 35.92 1.00e-23 102.00
IUUC-Obr-076075 Oryza brachyantha 83.14 2.00e-72 264.00
IUUC-Oin-079850 Oryza indica 85.79 1.00e-77 281.00
IUUC-Ome-081191 Oryza meridionalis 85.25 9.00e-77 278.00
IUUC-Oni-082886 Oryza nivara 85.25 2.00e-77 280.00
IUUC-Osa-085833 Oryza sativa 84.70 3.00e-77 280.00
IUUC-Ola-086372 Oryzias latipes 38.80 3.00e-28 117.00
IUUC-Oga-087988 Otolemur garnettii 36.62 9.00e-24 102.00
IUUC-Oar-089976 Ovis aries 35.21 2.00e-23 101.00
IUUC-Ptr-091377 Pan troglodytes 35.21 2.00e-23 101.00
IUUC-Pan-092348 Papio anubis 35.92 3.00e-23 101.00
IUUC-Psi-092982 Pelodiscus sinensis 38.03 2.00e-21 95.50
IUUC-Pma-094517 Petromyzon marinus 45.65 6.00e-09 55.10
IUUC-Ppa-095627 Physcomitrella patens 54.40 2.00e-50 191.00
IUUC-Pfo-096366 Poecilia formosa 38.25 4.00e-28 117.00
IUUC-Pab-098242 Pongo abelii 35.92 2.00e-23 101.00
IUUC-Pop-099776 Populus trichocarpa 60.99 3.00e-58 216.00
IUUC-Ppe-101586 Prunus persica 53.68 1.00e-34 137.00
IUUC-Pva-102627 Pteropus vampyrus 37.32 1.00e-24 105.00
IUUC-Pte-104279 Pyrenophora teres 37.74 4.00e-07 49.70
IUUC-Rno-105344 Rattus norvegicus 35.09 3.00e-24 104.00
IUUC-Sha-107420 Sarcophilus harrisii 36.62 3.00e-24 104.00
IUUC-Smo-109218 Selaginella moellendorffii 53.85 3.00e-47 179.00
IUUC-Sly-111612 Solanum lycopersicum 36.62 5.00e-29 120.00
IUUC-Stu-112127 Solanum tuberosum 57.69 2.00e-53 201.00
IUUC-Sar-113762 Sorex araneus 35.92 3.00e-23 100.00
IUUC-Tgu-116969 Taeniopygia guttata 37.32 1.00e-24 105.00
IUUC-Tru-118414 Takifugu rubripes 37.30 6.00e-24 103.00
IUUC-Tsy-119312 Tarsius syrichta 35.21 6.00e-23 100.00
IUUC-Tni-120687 Tetraodon nigroviridis 40.11 4.00e-27 114.00
IUUC-Tca-121028 Theobroma cacao 59.02 3.00e-48 183.00
IUUC-Tae-124956 Triticum aestivum 86.89 2.00e-82 296.00
IUUC-Tur-126558 Triticum urartu 85.06 4.00e-64 235.00
IUUC-Tbe-127751 Tupaia belangeri 27.46 2.00e-11 62.40
IUUC-Ttr-128731 Tursiops truncatus 30.46 2.00e-17 82.40
IUUC-Vpa-130187 Vicugna pacos 35.21 4.00e-23 100.00
IUUC-Vvi-131393 Vitis vinifera 58.56 2.00e-51 193.00
IUUC-Xtr-132512 Xenopus tropicalis 38.51 9.00e-26 109.00
IUUC-Xma-133203 Xiphophorus maculatus 37.70 7.00e-28 116.00
Created Date 25-Jun-2017

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