iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019803

UUCD1 version

UUC-CaJ-00069

Ensembl Protein ID

ENSCJAP00000024933.2

UniProt Accession

F6REA6; F6REA6_CALJA

Genbank Protein ID

JAB06889.1; JAB18946.1; JAB18947.1; JAB18948.1; JAB28065.1; JAB41843.1; JAB43911.1

Protein Name

TATA element modulatory factor

Genbank Nucleotide ID

ACFV01078307; GAMS01004190; GAMS01004189; GAMS01004188; GAMR01005867; GAMQ01000008; GAMP01008844

Gene Name

TMF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000013491.2	ENSCJAT00000026359.2	ENSCJAP00000024933.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	97.26	0.00e+00	1821.00	IUUC-Hsa-046889

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MSWFNASQIS SFAKQALSQA QKSIDRVLDI QEEEPSVWAE TIPYGEPGIS PPVSGGWDTS 60
TWGLKSNTEP QSPPIASPKA ITKPVRRTVV DESENFFSAF LSPTDVQTIQ QSPVVSKPPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATTTGGTT GCTGTGTACG TGGAAGAAGT AGGCGCATGC GCACACTGTC ACATTCGCCT 60
CAGCTGTGCG GAAACGGCCG AAGGTAACAT CCCGGGCCAG GGGGAGGCTG TCGGGGTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022092--TMF_DNA-bd
IPR022091--TMF_TATA-bd

Pfam

PF12329--TMF_DNA_bd
PF12325--TMF_TATA_bd

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0005794--C:Golgi apparatus
GO:0001675--P:acrosome assembly
GO:0071407--P:cellular response to organic cyclic compound
GO:0042742--P:defense response to bacterium
GO:0030317--P:flagellated sperm motility
GO:0033327--P:Leydig cell differentiation
GO:0032275--P:luteinizing hormone secretion
GO:0043066--P:negative regulation of apoptotic process
GO:0010629--P:negative regulation of gene expression
GO:0001819--P:positive regulation of cytokine production
GO:2000845--P:positive regulation of testosterone secretion
GO:0061136--P:regulation of proteasomal protein catabolic process
GO:0007289--P:spermatid nucleus differentiation

KEGG

cjc:100391404

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000973	Aegilops tauschii	31.67	1.00e-17	85.90
IUUC-Aml-001448	Ailuropoda melanoleuca	92.42	0.00e+00	1735.00
IUUC-Atr-003092	Amborella trichopoda	32.24	4.00e-39	156.00
IUUC-Apl-003546	Anas platyrhynchos	74.68	0.00e+00	1313.00
IUUC-Aca-004234	Anolis carolinensis	71.13	0.00e+00	1301.00
IUUC-Ath-007364	Arabidopsis thaliana	30.24	3.00e-37	150.00
IUUC-Acl-008271	Aspergillus clavatus	28.57	6.00e-12	66.20
IUUC-Afl-008405	Aspergillus flavus	27.45	2.00e-07	51.20
IUUC-Afu-009059	Aspergillus fumigatus	28.57	2.00e-12	67.80
IUUC-Ani-009416	Aspergillus nidulans	28.57	3.00e-11	64.30
IUUC-Ang-009857	Aspergillus niger	28.57	3.00e-11	63.90
IUUC-Aor-009910	Aspergillus oryzae	27.45	2.00e-07	51.20
IUUC-Ate-010427	Aspergillus terreus	32.74	4.00e-09	57.00
IUUC-Ame-011270	Astyanax mexicanus	65.83	0.00e+00	888.00
IUUC-Bgr-012100	Blumeria graminis	29.46	1.00e-08	55.50
IUUC-Bta-012337	Bos taurus	92.05	0.00e+00	1686.00
IUUC-Bci-013775	Botrytis cinerea	25.34	1.00e-11	65.90
IUUC-Bdi-014582	Brachypodium distachyon	33.42	1.00e-23	105.00
IUUC-Cel-018635	Caenorhabditis elegans	34.15	1.00e-01	30.80
IUUC-Cfa-020451	Canis familiaris	92.36	0.00e+00	1694.00
IUUC-Cpo-021327	Cavia porcellus	90.19	0.00e+00	1589.00
IUUC-Cre-022628	Chlamydomonas reinhardtii	30.13	4.00e-03	37.00
IUUC-Csa-023803	Chlorocebus sabaeus	97.53	0.00e+00	1820.00
IUUC-Cho-024293	Choloepus hoffmanni	87.75	0.00e+00	747.00
IUUC-Cin-025461	Ciona intestinalis	41.23	1.00e-38	153.00
IUUC-Cgl-026669	Colletotrichum gloeosporioides	29.20	4.00e-09	57.40
IUUC-Cme-027311	Cyanidioschyzon merolae	33.11	6.00e-04	39.30
IUUC-Dre-028098	Danio rerio	59.21	0.00e+00	975.00
IUUC-Dno-029535	Dasypus novemcinctus	91.32	0.00e+00	1651.00
IUUC-Dor-031120	Dipodomys ordii	88.04	0.00e+00	1656.00
IUUC-Dse-031548	Dothistroma septosporum	30.65	1.00e-07	52.00
IUUC-Dme-031658	Drosophila melanogaster	30.99	4.00e-22	100.00
IUUC-Ete-032764	Echinops telfairi	84.66	0.00e+00	1096.00
IUUC-Eca-034312	Equus caballus	93.33	0.00e+00	1692.00
IUUC-Eeu-034967	Erinaceus europaeus	84.23	0.00e+00	977.00
IUUC-Fca-036312	Felis catus	93.05	0.00e+00	1726.00
IUUC-Fal-036979	Ficedula albicollis	74.03	0.00e+00	1225.00
IUUC-Fox-037833	Fusarium oxysporum	43.18	3.00e-06	47.40
IUUC-Gmo-039175	Gadus morhua	66.51	0.00e+00	698.00
IUUC-Ggr-039752	Gaeumannomyces graminis	32.74	6.00e-11	63.20
IUUC-Gga-041252	Gallus gallus	74.42	0.00e+00	1320.00
IUUC-Gac-042186	Gasterosteus aculeatus	68.38	0.00e+00	682.00
IUUC-Gma-042878	Glycine max	30.71	1.00e-24	108.00
IUUC-Ggo-045127	Gorilla gorilla	96.71	0.00e+00	1807.00
IUUC-Hsa-046889	Homo sapiens	97.26	0.00e+00	1821.00
IUUC-Hvu-047231	Hordeum vulgare	40.20	6.00e-10	60.10
IUUC-Itr-048895	Ictidomys tridecemlineatus	84.19	0.00e+00	1393.00
IUUC-Kpa-049375	Komagataella pastoris	33.66	8.00e-08	52.40
IUUC-Lch-049701	Latimeria chalumnae	69.14	0.00e+00	1214.00
IUUC-Lpe-051071	Leersia perrieri	31.12	7.00e-16	79.70
IUUC-Loc-052900	Lepisosteus oculatus	69.59	0.00e+00	973.00
IUUC-Lma-053189	Leptosphaeria maculans	25.60	4.00e-14	73.60
IUUC-Laf-054583	Loxodonta africana	90.21	0.00e+00	1585.00
IUUC-Meu-056215	Macropus eugenii	69.80	3.00e-118	419.00
IUUC-Mor-057227	Magnaporthe oryzae	26.54	1.00e-07	52.00
IUUC-Mpo-057315	Magnaporthe poae	42.31	5.00e-07	50.10
IUUC-Mtr-058276	Medicago truncatula	27.61	1.00e-22	102.00
IUUC-Mga-059916	Meleagris gallopavo	74.58	0.00e+00	1263.00
IUUC-Mmr-061789	Microcebus murinus	81.81	0.00e+00	1184.00
IUUC-Mdo-062174	Monodelphis domestica	80.61	0.00e+00	1484.00
IUUC-Mmu-063422	Mus musculus	86.59	0.00e+00	1512.00
IUUC-Mac-065498	Musa acuminata	28.59	4.00e-30	127.00
IUUC-Mpu-065744	Mustela putorius furo	92.05	0.00e+00	1757.00
IUUC-Mlu-066925	Myotis lucifugus	90.27	0.00e+00	1566.00
IUUC-Nfi-068254	Neosartorya fischeri	28.57	1.00e-12	68.60
IUUC-Ncr-068887	Neurospora crassa	27.81	8.00e-11	62.80
IUUC-Nle-070100	Nomascus leucogenys	97.35	0.00e+00	1820.00
IUUC-Opr-071131	Ochotona princeps	84.89	0.00e+00	1181.00
IUUC-Ont-071378	Oreochromis niloticus	61.22	0.00e+00	977.00
IUUC-Oan-073705	Ornithorhynchus anatinus	80.49	0.00e+00	1526.00
IUUC-Ocu-074158	Oryctolagus cuniculus	92.17	0.00e+00	1746.00
IUUC-Oba-075498	Oryza barthii	30.38	4.00e-17	84.00
IUUC-Obr-076136	Oryza brachyantha	32.28	3.00e-33	137.00
IUUC-Ogl-077020	Oryza glaberrima	33.25	2.00e-25	111.00
IUUC-Ogu-078875	Oryza glumaepatula	30.38	4.00e-20	94.00
IUUC-Oin-079223	Oryza indica	33.25	2.00e-25	111.00
IUUC-Olo-080859	Oryza longistaminata	30.77	1.00e-17	85.90
IUUC-Ome-081621	Oryza meridionalis	30.61	5.00e-17	84.00
IUUC-Oni-082628	Oryza nivara	30.38	1.00e-16	82.40
IUUC-Opu-083825	Oryza punctata	30.87	1.00e-19	92.40
IUUC-Oru-084959	Oryza rufipogon	30.14	3.00e-16	80.90
IUUC-Osa-086104	Oryza sativa	33.25	2.00e-25	111.00
IUUC-Ola-087148	Oryzias latipes	59.25	0.00e+00	999.00
IUUC-Olu-087856	Ostreococcus lucimarinus	33.47	2.00e-15	77.40
IUUC-Oga-088598	Otolemur garnettii	91.22	0.00e+00	1695.00
IUUC-Oar-090450	Ovis aries	90.98	0.00e+00	1667.00
IUUC-Ptr-091659	Pan troglodytes	97.07	0.00e+00	1815.00
IUUC-Pan-091964	Papio anubis	84.05	0.00e+00	1543.00
IUUC-Psi-093585	Pelodiscus sinensis	80.62	0.00e+00	986.00
IUUC-Pma-094379	Petromyzon marinus	50.36	0.00e+00	751.00
IUUC-Pno-095032	Phaeosphaeria nodorum	28.10	3.00e-10	60.80
IUUC-Ppa-095425	Physcomitrella patens	33.12	7.00e-54	206.00
IUUC-Pfo-096386	Poecilia formosa	65.30	0.00e+00	862.00
IUUC-Pab-098042	Pongo abelii	95.19	0.00e+00	961.00
IUUC-Pop-099005	Populus trichocarpa	27.98	1.00e-14	74.30
IUUC-Pca-100308	Procavia capensis	91.84	0.00e+00	1177.00
IUUC-Ppe-101449	Prunus persica	28.10	5.00e-26	113.00
IUUC-Pva-103119	Pteropus vampyrus	87.03	0.00e+00	1194.00
IUUC-Pte-104335	Pyrenophora teres	27.27	1.00e-09	58.50
IUUC-Pyt-104547	Pyrenophora triticirepentis	27.27	2.00e-10	61.60
IUUC-Rno-105578	Rattus norvegicus	85.77	0.00e+00	1492.00
IUUC-Sha-106612	Sarcophilus harrisii	80.43	0.00e+00	1434.00
IUUC-Sja-107911	Schizosaccharomyces japonicus	34.69	1.00e-03	37.70
IUUC-Spo-108059	Schizosaccharomyces pombe	28.57	1.00e-06	48.10
IUUC-Ssl-108390	Sclerotinia sclerotiorum	26.86	9.00e-16	79.30
IUUC-Smo-108781	Selaginella moellendorffii	29.36	7.00e-17	81.30
IUUC-Sit-109754	Setaria italica	32.42	6.00e-26	113.00
IUUC-Sly-111573	Solanum lycopersicum	30.30	6.00e-35	142.00
IUUC-Sar-113118	Sorex araneus	85.27	0.00e+00	1523.00
IUUC-Sbi-114519	Sorghum bicolor	31.58	9.00e-24	105.00
IUUC-Ssc-115826	Sus scrofa	87.57	0.00e+00	1583.00
IUUC-Tgu-116702	Taeniopygia guttata	74.48	0.00e+00	1233.00
IUUC-Tru-117915	Takifugu rubripes	65.39	0.00e+00	834.00
IUUC-Tsy-119224	Tarsius syrichta	94.33	0.00e+00	1743.00
IUUC-Tni-120157	Tetraodon nigroviridis	60.27	0.00e+00	938.00
IUUC-Tca-121361	Theobroma cacao	31.86	9.00e-18	85.50
IUUC-Tre-122066	Trichoderma reesei	31.43	3.00e-09	57.80
IUUC-Tvi-122562	Trichoderma virens	32.29	9.00e-09	55.80
IUUC-Tae-123602	Triticum aestivum	33.89	2.00e-21	98.60
IUUC-Tme-126895	Tuber melanosporum	31.66	4.00e-07	50.40
IUUC-Tbe-128074	Tupaia belangeri	85.76	0.00e+00	1272.00
IUUC-Ttr-128190	Tursiops truncatus	92.86	0.00e+00	1730.00
IUUC-Vda-129710	Verticillium dahliae	31.86	2.00e-11	64.70
IUUC-Vpa-130072	Vicugna pacos	92.54	0.00e+00	1576.00
IUUC-Vvi-130853	Vitis vinifera	31.58	4.00e-13	70.50
IUUC-Xtr-131969	Xenopus tropicalis	65.33	0.00e+00	1103.00
IUUC-Xma-133623	Xiphophorus maculatus	65.25	0.00e+00	903.00
IUUC-Yli-134550	Yarrowia lipolytica	25.04	2.00e-13	71.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence