• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Sbi-114726
UUCD1 version UUC-SoB-00350
Ensembl Protein ID Sb09g000320.1
UniProt Accession C5YXY0; C5YXY0_SORBI
Genbank Protein ID EES17520.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000768
Gene Name SORBI_009G001200
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb09g000320 Sb09g000320.1 Sb09g000320.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/U-box 1.80e-07 32.0 124 173
E3 activity/RING/RING 6.90e-12 46.5 128 167
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box
   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
           + f C   ++l+  Pv++p+G+ +  ++ +kw+++ ++tc ++r+++  +
   Q: 124  KNFSCVFCMKLPDRPVTTPCGHNFCLKCFQKWIQNRKRTCAKCRAQIPAK 173
           6799****************************************998655 PP
   

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C+  +++ p+++pCgH f+++C+qkw      ++++ +C  Cr
   Q: 128  CVFCMKLPDR-PVTTPCGHNFCLKCFQKW-----IQNRKRTCAKCR 167
           9*********.9*****************.....456666787776 PP
   
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MPDLPCDGDG VCMVCRAASP PEVDLLRCST CATPWHSPCL SKPPALADAA SWSCPDCSPD 60
PAAAAAPSGP ANTLVAAIRA IEADTTLSDH EKARRRQALL AGDAHDDDDD DDAAADDALE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sbi-114726|E3,U-box;E3,RING|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGCAAAACCC AAAATTTTGA ACCCTTGGGT GCCTCCGCTG CTGCTACTAT AGTCTACTAC 60
CCCCATCAAA TCAAACTCCT CCCTCCGGCT TCCCCTCCAT TTCCTTCCTC TCCCCACCAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-114726|E3,U-box;E3,RING|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF02182--SAD_SRA
PF13445--zf-RING_UBOX
SMART

SM00249--PHD
SM00184--RING
SM00466--SRA
Gene Ontology

GO:0005720--C:nuclear heterochromatin
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010216--P:maintenance of DNA methylation
GO:0016567--P:protein ubiquitination
GO:0090308--P:regulation of methylation-dependent chromatin silencing
KEGG sbi:SORBI_09g000320
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000242 Aegilops tauschii 82.08 0.00e+00 686.00
IUUC-Aml-001401 Ailuropoda melanoleuca 32.64 1.00e-43 170.00
IUUC-Atr-002603 Amborella trichopoda 64.87 0.00e+00 786.00
IUUC-Apl-003819 Anas platyrhynchos 50.00 2.00e-42 166.00
IUUC-Aca-005287 Anolis carolinensis 47.20 2.00e-41 163.00
IUUC-Aly-006276 Arabidopsis lyrata 65.36 0.00e+00 808.00
IUUC-Ath-006667 Arabidopsis thaliana 63.71 0.00e+00 775.00
IUUC-Ame-011845 Astyanax mexicanus 50.00 2.00e-41 163.00
IUUC-Bta-012710 Bos taurus 33.88 6.00e-44 171.00
IUUC-Bci-013703 Botrytis cinerea 32.89 2.00e-08 53.10
IUUC-Bdi-014586 Brachypodium distachyon 80.10 0.00e+00 950.00
IUUC-Bol-015519 Brassica oleracea 66.55 0.00e+00 806.00
IUUC-Bra-017110 Brassica rapa 67.11 0.00e+00 807.00
IUUC-Cel-018714 Caenorhabditis elegans 45.00 1.00e-05 43.50
IUUC-Cja-019807 Callithrix jacchus 33.24 2.00e-42 166.00
IUUC-Cfa-021096 Canis familiaris 32.65 7.00e-44 171.00
IUUC-Cpo-022125 Cavia porcellus 36.80 1.00e-48 187.00
IUUC-Cre-022645 Chlamydomonas reinhardtii 34.72 1.00e-79 290.00
IUUC-Csa-023951 Chlorocebus sabaeus 32.90 9.00e-43 167.00
IUUC-Cho-024857 Choloepus hoffmanni 44.76 4.00e-19 89.00
IUUC-Cin-025454 Ciona intestinalis 34.95 3.00e-42 166.00
IUUC-Cgl-026498 Colletotrichum gloeosporioides 33.07 5.00e-10 58.50
IUUC-Cne-026942 Cryptococcus neoformans 48.17 1.00e-32 130.00
IUUC-Dre-028200 Danio rerio 35.85 4.00e-46 179.00
IUUC-Dno-029950 Dasypus novemcinctus 32.38 1.00e-42 167.00
IUUC-Dor-031084 Dipodomys ordii 50.00 8.00e-42 164.00
IUUC-Dse-031392 Dothistroma septosporum 38.94 9.00e-12 62.80
IUUC-Ete-032469 Echinops telfairi 38.89 2.00e-08 51.20
IUUC-Eca-033272 Equus caballus 32.11 1.00e-42 167.00
IUUC-Eeu-035077 Erinaceus europaeus 50.62 4.00e-35 141.00
IUUC-Fca-035570 Felis catus 33.73 1.00e-40 160.00
IUUC-Fal-037550 Ficedula albicollis 50.00 2.00e-42 166.00
IUUC-Gmo-038826 Gadus morhua 35.66 4.00e-45 175.00
IUUC-Ggr-039874 Gaeumannomyces graminis 31.97 8.00e-09 54.30
IUUC-Gga-040484 Gallus gallus 35.82 6.00e-46 178.00
IUUC-Gac-042196 Gasterosteus aculeatus 37.40 2.00e-46 179.00
IUUC-Gma-043488 Glycine max 67.06 0.00e+00 789.00
IUUC-Ggo-045639 Gorilla gorilla 33.42 1.00e-42 167.00
IUUC-Hsa-046422 Homo sapiens 33.16 2.00e-42 166.00
IUUC-Hvu-047471 Hordeum vulgare 82.09 0.00e+00 785.00
IUUC-Itr-048532 Ictidomys tridecemlineatus 33.42 1.00e-41 163.00
IUUC-Lch-050162 Latimeria chalumnae 49.48 1.00e-40 160.00
IUUC-Lpe-050756 Leersia perrieri 71.25 0.00e+00 1062.00
IUUC-Loc-051806 Lepisosteus oculatus 50.52 6.00e-42 165.00
IUUC-Lma-052953 Leptosphaeria maculans 29.17 6.00e-10 58.20
IUUC-Laf-053529 Loxodonta africana 33.42 3.00e-43 169.00
IUUC-Mcc-055815 Macaca mulatta 32.90 2.00e-42 166.00
IUUC-Meu-056189 Macropus eugenii 50.82 3.00e-26 112.00
IUUC-Mpo-057318 Magnaporthe poae 34.11 4.00e-08 52.00
IUUC-Mtr-058805 Medicago truncatula 64.03 0.00e+00 759.00
IUUC-Mla-058836 Melampsora laricipopulina 51.59 4.00e-41 161.00
IUUC-Mga-059759 Meleagris gallopavo 50.52 3.00e-42 166.00
IUUC-Mvi-060378 Microbotryum violaceum 54.49 1.00e-32 133.00
IUUC-Mmr-060646 Microcebus murinus 32.40 5.00e-44 172.00
IUUC-Mdo-061911 Monodelphis domestica 50.00 2.00e-41 163.00
IUUC-Mmu-064198 Mus musculus 34.20 5.00e-44 172.00
IUUC-Mac-064697 Musa acuminata 65.72 0.00e+00 834.00
IUUC-Mpu-065830 Mustela putorius furo 33.59 8.00e-45 173.00
IUUC-Mlu-067256 Myotis lucifugus 44.33 2.00e-37 150.00
IUUC-Ncr-068857 Neurospora crassa 32.23 9.00e-06 45.40
IUUC-Nle-069901 Nomascus leucogenys 33.78 3.00e-42 166.00
IUUC-Opr-070813 Ochotona princeps 51.92 2.00e-09 56.60
IUUC-Ont-072019 Oreochromis niloticus 44.78 2.00e-41 163.00
IUUC-Oan-073109 Ornithorhynchus anatinus 46.51 2.00e-40 159.00
IUUC-Ocu-074748 Oryctolagus cuniculus 33.42 1.00e-42 167.00
IUUC-Oba-075108 Oryza barthii 72.81 0.00e+00 1044.00
IUUC-Obr-076572 Oryza brachyantha 71.37 0.00e+00 1032.00
IUUC-Ogl-077177 Oryza glaberrima 72.34 0.00e+00 1027.00
IUUC-Ogu-078298 Oryza glumaepatula 72.45 0.00e+00 1027.00
IUUC-Oin-079911 Oryza indica 72.91 0.00e+00 1046.00
IUUC-Olo-080527 Oryza longistaminata 62.24 0.00e+00 795.00
IUUC-Ome-081137 Oryza meridionalis 70.28 0.00e+00 983.00
IUUC-Oni-082620 Oryza nivara 72.91 0.00e+00 1046.00
IUUC-Opu-083974 Oryza punctata 74.03 0.00e+00 1055.00
IUUC-Oru-084976 Oryza rufipogon 72.07 0.00e+00 1027.00
IUUC-Osa-085339 Oryza sativa 72.07 0.00e+00 1027.00
IUUC-Ola-086416 Oryzias latipes 50.52 2.00e-41 163.00
IUUC-Oga-088218 Otolemur garnettii 33.16 3.00e-43 169.00
IUUC-Oar-090189 Ovis aries 33.88 9.00e-44 171.00
IUUC-Ptr-091290 Pan troglodytes 33.42 1.00e-42 167.00
IUUC-Pan-092855 Papio anubis 48.97 3.00e-41 162.00
IUUC-Psi-093033 Pelodiscus sinensis 46.98 3.00e-41 162.00
IUUC-Pma-094339 Petromyzon marinus 49.30 6.00e-43 168.00
IUUC-Ppa-095189 Physcomitrella patens 59.11 0.00e+00 730.00
IUUC-Pfo-097186 Poecilia formosa 44.78 3.00e-41 162.00
IUUC-Pab-098211 Pongo abelii 32.38 7.00e-42 164.00
IUUC-Pop-099561 Populus trichocarpa 65.77 0.00e+00 793.00
IUUC-Pca-100531 Procavia capensis 31.89 2.00e-42 166.00
IUUC-Ppe-101961 Prunus persica 67.19 0.00e+00 785.00
IUUC-Pva-102266 Pteropus vampyrus 34.91 6.00e-43 168.00
IUUC-Pgr-103644 Puccinia graminis 53.02 3.00e-39 155.00
IUUC-Ptt-103867 Puccinia triticina 52.20 9.00e-42 164.00
IUUC-Pyt-104740 Pyrenophora triticirepentis 29.53 4.00e-12 65.90
IUUC-Rno-105345 Rattus norvegicus 35.64 2.00e-46 180.00
IUUC-Sha-106618 Sarcophilus harrisii 50.00 2.00e-41 163.00
IUUC-Smo-109319 Selaginella moellendorffii 54.97 1.00e-179 622.00
IUUC-Sit-110588 Setaria italica 75.27 0.00e+00 1054.00
IUUC-Sly-111415 Solanum lycopersicum 63.85 0.00e+00 792.00
IUUC-Stu-112842 Solanum tuberosum 63.20 0.00e+00 786.00
IUUC-Sar-113546 Sorex araneus 46.40 5.00e-23 102.00
IUUC-Sre-115182 Sporisorium reilianum 45.71 2.00e-33 135.00
IUUC-Ssc-116081 Sus scrofa 48.45 1.00e-40 160.00
IUUC-Tgu-116538 Taeniopygia guttata 50.00 3.00e-42 165.00
IUUC-Tru-117599 Takifugu rubripes 50.52 1.00e-41 164.00
IUUC-Tsy-119249 Tarsius syrichta 32.89 1.00e-42 167.00
IUUC-Tni-119843 Tetraodon nigroviridis 36.13 3.00e-47 182.00
IUUC-Tca-121614 Theobroma cacao 62.05 0.00e+00 777.00
IUUC-Tae-125473 Triticum aestivum 77.04 0.00e+00 874.00
IUUC-Tme-127149 Tuber melanosporum 45.99 7.00e-26 110.00
IUUC-Tbe-127823 Tupaia belangeri 31.13 8.00e-37 147.00
IUUC-Ttr-128215 Tursiops truncatus 33.33 2.00e-43 170.00
IUUC-Vda-129727 Verticillium dahliae 36.00 3.00e-11 62.00
IUUC-Vpa-130073 Vicugna pacos 32.46 2.00e-43 169.00
IUUC-Vvi-131413 Vitis vinifera 54.35 0.00e+00 792.00
IUUC-Xtr-132432 Xenopus tropicalis 49.48 1.00e-41 164.00
IUUC-Xma-133888 Xiphophorus maculatus 44.78 5.00e-41 162.00
IUUC-Zma-135894 Zea mays 88.17 0.00e+00 1219.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved