iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048481

Ensembl Protein ID

ENSSTOP00000018487.1

UniProt Accession

I3N291; I3N291_ICTTR

Genbank Protein ID

ENSSTOP00000018487

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01053251

Gene Name

TRIM56

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000019886.1	ENSSTOT00000025066.1	ENSSTOP00000018487.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	86.62	0.00e+00	1103.00	IUUC-Hsa-046238
E3 activity/RING/RING	82.97	0.00e+00	1013.00	IUUC-Mmu-064375

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MFSQGSSPSL LEALSSDFLA CKICLEQLHT PKTLPCLHTY CQDCLAQLAD GGHVRCPECR 60
ETVPVPPAGV AAFKTNFFVN GLLDLVKARA CGDLRAGKPA CALCPLVGGT SAGGPATARC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTTCCC AGGGCTCCTC GCCCTCCCTC CTGGAGGCCC TGAGCAGCGA CTTCCTGGCC 60
TGCAAAATCT GCCTGGAGCA GCTGCACACA CCCAAGACGC TGCCCTGCCT GCACACCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001496	Ailuropoda melanoleuca	85.41	0.00e+00	1071.00
IUUC-Aca-004996	Anolis carolinensis	50.41	1.00e-75	277.00
IUUC-Bta-012368	Bos taurus	86.63	0.00e+00	1123.00
IUUC-Cja-019698	Callithrix jacchus	88.08	0.00e+00	1159.00
IUUC-Csa-023090	Chlorocebus sabaeus	88.74	0.00e+00	1099.00
IUUC-Dno-030051	Dasypus novemcinctus	77.56	0.00e+00	947.00
IUUC-Ete-032312	Echinops telfairi	88.48	3.00e-94	337.00
IUUC-Eca-033253	Equus caballus	92.65	5.00e-108	383.00
IUUC-Eeu-034772	Erinaceus europaeus	80.43	1.00e-52	199.00
IUUC-Fca-036198	Felis catus	80.33	0.00e+00	847.00
IUUC-Ggo-045486	Gorilla gorilla	87.55	0.00e+00	1090.00
IUUC-Hsa-046238	Homo sapiens	87.58	0.00e+00	1090.00
IUUC-Loc-052915	Lepisosteus oculatus	31.49	2.00e-72	266.00
IUUC-Laf-053640	Loxodonta africana	84.51	0.00e+00	1031.00
IUUC-Mcc-055540	Macaca mulatta	88.34	0.00e+00	1108.00
IUUC-Mmr-060840	Microcebus murinus	85.96	0.00e+00	1093.00
IUUC-Mmu-064375	Mus musculus	82.97	0.00e+00	1082.00
IUUC-Mpu-066797	Mustela putorius furo	84.31	0.00e+00	1066.00
IUUC-Mlu-067996	Myotis lucifugus	84.53	0.00e+00	1084.00
IUUC-Nle-069238	Nomascus leucogenys	94.85	1.00e-119	421.00
IUUC-Oga-089156	Otolemur garnettii	82.54	0.00e+00	1088.00
IUUC-Oar-090056	Ovis aries	80.03	0.00e+00	979.00
IUUC-Ptr-090837	Pan troglodytes	82.16	0.00e+00	626.00
IUUC-Psi-093493	Pelodiscus sinensis	46.24	8.00e-60	224.00
IUUC-Pab-097607	Pongo abelii	88.08	0.00e+00	1107.00
IUUC-Pva-102758	Pteropus vampyrus	87.23	2.00e-161	562.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence