iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050115

Ensembl Protein ID

ENSLACP00000013527.2

UniProt Accession

H3AV56; H3AV56_LATCH

Genbank Protein ID

ENSLACP00000013527

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01113104

Gene Name

SKP2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000011909.2	ENSLACT00000013623.2	ENSLACP00000013527.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	6.60e-06	26.5	94	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 99   daglldrlpeeilveilklldkeellraarvcrrwqelasqkalwktv 146
              ++d+lp+e+l+ i+  l+  +ll++++vc+rw++la +++lw+++
   Q: 94   TGVSWDKLPDELLLGIFYCLPLADLLKVSQVCKRWRCLAFDETLWHSI 141
           556899******************************99999****986 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSRGSRRPLQ DLPLSSDKTA NFTWAWDTKK TQELLSGMGV SLMDKDSRGS EGIPQDLIMN 60
MSPPQKRQKM KANSNEGHPF QIARRARQKR ESGTGVSWDK LPDELLLGIF YCLPLADLLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCTGCAGG TTCCGGTGGT GTCCTTTCTG GTGGCGCGTG GTGAAGCGGG AGGTTTAAAG 60
AGTTCCCGCG TCCAGTTATC GGCAACAAGT GTACCAAAAC CCATCTTCCC ATATCATAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like
PF00560--LRR_1

SMART

SM00256--FBOX
SM00367--LRR_CC

KEGG

lcm:102356499

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002197	Ailuropoda melanoleuca	58.71	1.00e-132	465.00
IUUC-Apl-003453	Anas platyrhynchos	68.29	6.00e-120	423.00
IUUC-Aca-005185	Anolis carolinensis	57.38	7.00e-133	466.00
IUUC-Ame-010665	Astyanax mexicanus	51.82	3.00e-108	385.00
IUUC-Bta-013450	Bos taurus	59.19	1.00e-140	492.00
IUUC-Bra-016668	Brassica rapa	27.40	7.00e-09	55.50
IUUC-Cel-018410	Caenorhabditis elegans	29.19	9.00e-29	120.00
IUUC-Cja-019834	Callithrix jacchus	58.23	7.00e-138	483.00
IUUC-Cfa-020401	Canis familiaris	59.19	2.00e-139	488.00
IUUC-Cpo-022183	Cavia porcellus	58.47	1.00e-139	489.00
IUUC-Csa-023418	Chlorocebus sabaeus	58.47	2.00e-136	478.00
IUUC-Cho-024412	Choloepus hoffmanni	54.65	3.00e-104	372.00
IUUC-Cin-025248	Ciona intestinalis	30.79	2.00e-41	163.00
IUUC-Csv-026189	Ciona savignyi	32.01	9.00e-36	144.00
IUUC-Dre-028032	Danio rerio	54.72	3.00e-123	434.00
IUUC-Dno-029222	Dasypus novemcinctus	58.47	3.00e-139	488.00
IUUC-Dor-030505	Dipodomys ordii	55.21	2.00e-102	365.00
IUUC-Dme-031972	Drosophila melanogaster	34.97	1.00e-54	207.00
IUUC-Ete-032234	Echinops telfairi	52.26	5.00e-66	244.00
IUUC-Eca-033944	Equus caballus	59.67	8.00e-141	493.00
IUUC-Eeu-035008	Erinaceus europaeus	54.09	5.00e-77	280.00
IUUC-Fca-035412	Felis catus	59.19	3.00e-139	488.00
IUUC-Fal-037337	Ficedula albicollis	60.82	4.00e-132	464.00
IUUC-Gmo-038934	Gadus morhua	44.66	4.00e-49	188.00
IUUC-Gga-041152	Gallus gallus	63.77	2.00e-152	531.00
IUUC-Gac-041819	Gasterosteus aculeatus	45.17	8.00e-89	320.00
IUUC-Ggo-045479	Gorilla gorilla	55.21	5.00e-108	384.00
IUUC-Hsa-046512	Homo sapiens	57.76	1.00e-135	476.00
IUUC-Itr-048515	Ictidomys tridecemlineatus	58.71	2.00e-136	478.00
IUUC-Loc-052554	Lepisosteus oculatus	54.70	3.00e-119	421.00
IUUC-Laf-053563	Loxodonta africana	57.31	3.00e-130	457.00
IUUC-Mcc-055143	Macaca mulatta	58.47	5.00e-137	480.00
IUUC-Meu-056593	Macropus eugenii	46.98	6.00e-81	294.00
IUUC-Mtr-057820	Medicago truncatula	25.97	4.00e-10	60.50
IUUC-Mga-060084	Meleagris gallopavo	65.38	2.00e-97	347.00
IUUC-Mmr-060660	Microcebus murinus	58.95	8.00e-139	486.00
IUUC-Mdo-062363	Monodelphis domestica	59.76	4.00e-135	474.00
IUUC-Mmu-063287	Mus musculus	55.13	3.00e-129	454.00
IUUC-Mac-064464	Musa acuminata	26.15	4.00e-09	56.20
IUUC-Mpu-065791	Mustela putorius furo	59.19	8.00e-140	489.00
IUUC-Mlu-067714	Myotis lucifugus	56.67	2.00e-130	458.00
IUUC-Nle-069823	Nomascus leucogenys	58.00	5.00e-136	477.00
IUUC-Opr-071046	Ochotona princeps	44.75	3.00e-54	205.00
IUUC-Ont-071820	Oreochromis niloticus	44.68	3.00e-79	288.00
IUUC-Ocu-074868	Oryctolagus cuniculus	58.95	2.00e-140	491.00
IUUC-Ola-086608	Oryzias latipes	48.81	4.00e-87	314.00
IUUC-Oga-089044	Otolemur garnettii	58.95	1.00e-138	486.00
IUUC-Oar-089650	Ovis aries	58.95	2.00e-139	488.00
IUUC-Ptr-090743	Pan troglodytes	57.76	9.00e-136	476.00
IUUC-Pan-092501	Papio anubis	58.47	5.00e-137	480.00
IUUC-Psi-094032	Pelodiscus sinensis	64.66	3.00e-157	547.00
IUUC-Pfo-097279	Poecilia formosa	47.40	3.00e-66	245.00
IUUC-Pab-097821	Pongo abelii	55.77	2.00e-108	385.00
IUUC-Pop-099168	Populus trichocarpa	26.53	4.00e-10	60.50
IUUC-Pca-100100	Procavia capensis	55.81	1.00e-102	365.00
IUUC-Pva-103181	Pteropus vampyrus	56.62	2.00e-105	375.00
IUUC-Rno-105091	Rattus norvegicus	56.09	6.00e-131	460.00
IUUC-Sha-107226	Sarcophilus harrisii	61.02	1.00e-140	492.00
IUUC-Smo-109321	Selaginella moellendorffii	27.66	7.00e-10	59.30
IUUC-Ssc-115665	Sus scrofa	58.95	4.00e-139	487.00
IUUC-Tgu-116982	Taeniopygia guttata	59.95	2.00e-130	459.00
IUUC-Tru-118276	Takifugu rubripes	47.86	4.00e-79	288.00
IUUC-Tsy-119074	Tarsius syrichta	57.75	3.00e-114	404.00
IUUC-Tni-120702	Tetraodon nigroviridis	48.42	5.00e-53	201.00
IUUC-Tbe-127990	Tupaia belangeri	56.52	1.00e-94	340.00
IUUC-Ttr-128661	Tursiops truncatus	53.08	4.00e-71	261.00
IUUC-Xtr-132166	Xenopus tropicalis	60.77	2.00e-134	471.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence