iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-061816

Ensembl Protein ID

ENSMODP00000012094.3

UniProt Accession

F6SH52; F6SH52_MONDO

Protein Name

Uncharacterized protein

Gene Name

PATZ1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000009674.3	ENSMODT00000012318.3	ENSMODP00000012094.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	2.10e-14	53.8	54	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmelees.........................ksklmveikdvqpevfrallkFlYtgk 64
           +Dv+l vg+e f+ah++vLaa+S++F++ f+ +l e+                          ++ + e++ ++ +vf ++l+F Yt++
   Q: 54   CDVLLRVGDESFPAHRAVLAACSEYFESVFSAQLAEGgpggpdaggpqdvtgaaggpgpagaGPSRELEMHTISSKVFGDILDFAYTSR 142
           8************************************************************9778999999****************99 PP
   S: 65   l 65
           +
   Q: 143  I 143
           7 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MQRGAARPAG CAVAGRGWRA PGPSSGCYTY QVSRHSTEML HNLNQQRKNG GRFCDVLLRV 60
GDESFPAHRA VLAACSEYFE SVFSAQLAEG GPGGPDAGGP QDVTGAAGGP GPAGAGPSRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGCGCG GCGCGGCGCG TCCTGCGGGC TGCGCAGTAG CGGGCCGGGG CTGGCGTGCC 60
CCAGGGCCCT CGTCCGGCTG CTACACGTAC CAGGTGAGCC GCCACAGCAC GGAGATGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002634--BolA
IPR000210--BTB/POZ_dom
IPR000637--HMGI/Y_DNA-bd_CS
IPR004039--Rubredoxin-type_fold
IPR011333--SKP1/BTB/POZ
IPR013087--Znf_C2H2_type
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50097--BTB
PS00354--HMGI_Y
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00651--BTB

SMART

SM00225--BTB
SM00355--ZnF_C2H2

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0003682--F:chromatin binding
GO:0046872--F:metal ion binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077--F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0008584--P:male gonad development
GO:0007283--P:spermatogenesis
GO:0030217--P:T cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001393	Ailuropoda melanoleuca	83.23	0.00e+00	967.00
IUUC-Acl-008012	Aspergillus clavatus	35.14	2.00e-04	37.00
IUUC-Ame-010861	Astyanax mexicanus	50.83	2.00e-155	543.00
IUUC-Bta-012647	Bos taurus	83.23	0.00e+00	967.00
IUUC-Cja-019987	Callithrix jacchus	83.31	0.00e+00	953.00
IUUC-Cfa-020091	Canis familiaris	83.23	0.00e+00	967.00
IUUC-Cpo-021731	Cavia porcellus	82.26	0.00e+00	956.00
IUUC-Csa-023323	Chlorocebus sabaeus	88.91	0.00e+00	836.00
IUUC-Cho-024339	Choloepus hoffmanni	84.71	7.00e-99	354.00
IUUC-Dre-028776	Danio rerio	54.70	1.00e-166	579.00
IUUC-Dno-028988	Dasypus novemcinctus	82.71	0.00e+00	950.00
IUUC-Eca-034224	Equus caballus	90.07	0.00e+00	996.00
IUUC-Fca-035834	Felis catus	89.90	0.00e+00	990.00
IUUC-Gmo-038564	Gadus morhua	49.00	5.00e-151	528.00
IUUC-Gga-040923	Gallus gallus	78.27	0.00e+00	910.00
IUUC-Gac-042115	Gasterosteus aculeatus	50.60	3.00e-162	565.00
IUUC-Ggo-045483	Gorilla gorilla	83.71	0.00e+00	975.00
IUUC-Hsa-045831	Homo sapiens	83.55	0.00e+00	951.00
IUUC-Itr-048966	Ictidomys tridecemlineatus	83.06	0.00e+00	966.00
IUUC-Lch-050298	Latimeria chalumnae	63.14	0.00e+00	722.00
IUUC-Laf-053714	Loxodonta africana	82.74	0.00e+00	971.00
IUUC-Mcc-055844	Macaca mulatta	81.33	0.00e+00	860.00
IUUC-Mmr-061004	Microcebus murinus	82.80	0.00e+00	971.00
IUUC-Mmu-063774	Mus musculus	82.74	0.00e+00	962.00
IUUC-Mpu-066238	Mustela putorius furo	88.71	0.00e+00	829.00
IUUC-Mlu-068149	Myotis lucifugus	83.06	0.00e+00	966.00
IUUC-Opr-071017	Ochotona princeps	80.64	2.00e-171	595.00
IUUC-Ont-072352	Oreochromis niloticus	55.97	9.00e-172	597.00
IUUC-Oan-073423	Ornithorhynchus anatinus	82.45	0.00e+00	954.00
IUUC-Ocu-074291	Oryctolagus cuniculus	88.31	0.00e+00	830.00
IUUC-Oga-088646	Otolemur garnettii	83.55	0.00e+00	974.00
IUUC-Oar-089847	Ovis aries	83.39	0.00e+00	931.00
IUUC-Ptr-091669	Pan troglodytes	83.71	0.00e+00	975.00
IUUC-Pfo-097307	Poecilia formosa	53.48	6.00e-162	564.00
IUUC-Pab-097693	Pongo abelii	83.87	0.00e+00	976.00
IUUC-Pca-100274	Procavia capensis	72.46	5.00e-91	328.00
IUUC-Pva-102261	Pteropus vampyrus	83.39	0.00e+00	967.00
IUUC-Rno-105339	Rattus norvegicus	89.72	0.00e+00	986.00
IUUC-Ssc-116429	Sus scrofa	87.95	0.00e+00	983.00
IUUC-Tgu-116916	Taeniopygia guttata	84.19	0.00e+00	868.00
IUUC-Tru-117811	Takifugu rubripes	52.09	1.00e-161	563.00
IUUC-Tni-120697	Tetraodon nigroviridis	53.26	1.00e-158	553.00
IUUC-Ttr-128276	Tursiops truncatus	83.06	0.00e+00	965.00
IUUC-Xtr-131778	Xenopus tropicalis	62.54	0.00e+00	667.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence