iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114208

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G460600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g043230	Sb01g043230.1	Sb01g043230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.40e-10	40.0	46	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl..qkw.....pglknssskefrCPlCr 46
           C+iC+e+f   ++ p+vl CgH+++++C+   +w     p l+ +   +++CP+C+
   Q: 46   CPICWESFnlvENVPYVLWCGHTMCKNCIlgLHWavvkfPSLPIQLPLFISCPWCN 101
           ********999999***************99999*********************7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MWSFASNAIA GSLKKKGQPS KCSISNPDCS DDEVSSCTSR EEGLDCPICW ESFNLVENVP 60
YVLWCGHTMC KNCILGLHWA VVKFPSLPIQ LPLFISCPWC NLLSFRLVYK GNLRFPRKNY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCCTTCTT CCTCCTCTTC CGCCCCTCCA CTGCTCCTTC TCTCGCCTCT GCCTCTTGAC 60
CTCTCCATCG TTCGACCTCG CAACGCGGCA AGTAGGGGGT GCGGCGGTCT TCACCGAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_01g043230

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000568	Aegilops tauschii	78.93	2.00e-98	350.00
IUUC-Atr-002488	Amborella trichopoda	56.23	7.00e-75	272.00
IUUC-Apl-003290	Anas platyrhynchos	41.30	4.00e-05	43.50
IUUC-Aca-004905	Anolis carolinensis	41.30	4.00e-05	43.50
IUUC-Aly-005618	Arabidopsis lyrata	60.62	9.00e-77	278.00
IUUC-Ath-007373	Arabidopsis thaliana	61.00	6.00e-77	279.00
IUUC-Bta-012546	Bos taurus	35.00	4.00e-06	44.30
IUUC-Bdi-014924	Brachypodium distachyon	83.14	8.00e-102	362.00
IUUC-Bol-016548	Brassica oleracea	58.94	2.00e-83	300.00
IUUC-Bra-017276	Brassica rapa	57.69	1.00e-83	301.00
IUUC-Cfa-020443	Canis familiaris	35.00	7.00e-06	43.90
IUUC-Dre-028035	Danio rerio	34.38	8.00e-06	45.40
IUUC-Dme-031708	Drosophila melanogaster	45.71	3.00e-04	40.00
IUUC-Eeu-034856	Erinaceus europaeus	35.00	1.00e-06	44.70
IUUC-Fca-036599	Felis catus	34.48	1.00e-05	42.70
IUUC-Gma-043252	Glycine max	66.17	5.00e-92	329.00
IUUC-Ggo-045325	Gorilla gorilla	36.67	2.00e-06	45.40
IUUC-Hsa-046491	Homo sapiens	36.67	2.00e-06	45.40
IUUC-Hvu-047109	Hordeum vulgare	80.84	8.00e-100	355.00
IUUC-Lpe-050700	Leersia perrieri	83.85	3.00e-97	347.00
IUUC-Loc-051895	Lepisosteus oculatus	39.66	2.00e-07	47.80
IUUC-Laf-053629	Loxodonta africana	34.48	6.00e-06	43.50
IUUC-Mcc-055025	Macaca mulatta	35.00	2.00e-06	45.10
IUUC-Meu-055903	Macropus eugenii	36.67	1.00e-06	45.80
IUUC-Mtr-057842	Medicago truncatula	63.30	3.00e-90	323.00
IUUC-Mmr-061478	Microcebus murinus	35.00	2.00e-06	45.10
IUUC-Mdo-062349	Monodelphis domestica	36.67	7.00e-07	45.80
IUUC-Mmu-063251	Mus musculus	35.00	2.00e-06	45.10
IUUC-Mac-064923	Musa acuminata	65.67	8.00e-75	272.00
IUUC-Mpu-066126	Mustela putorius furo	35.00	4.00e-06	44.30
IUUC-Mlu-068023	Myotis lucifugus	41.30	4.00e-05	43.50
IUUC-Opr-070587	Ochotona princeps	41.30	4.00e-05	43.50
IUUC-Ont-071268	Oreochromis niloticus	35.94	2.00e-06	47.40
IUUC-Oba-075337	Oryza barthii	83.85	8.00e-99	352.00
IUUC-Obr-076124	Oryza brachyantha	81.54	4.00e-111	392.00
IUUC-Ogl-077305	Oryza glaberrima	83.85	8.00e-99	352.00
IUUC-Ogu-078906	Oryza glumaepatula	83.85	8.00e-99	352.00
IUUC-Oin-079681	Oryza indica	83.85	8.00e-99	352.00
IUUC-Oni-082621	Oryza nivara	83.85	8.00e-99	352.00
IUUC-Opu-083804	Oryza punctata	82.31	3.00e-97	347.00
IUUC-Oru-084889	Oryza rufipogon	83.85	8.00e-99	352.00
IUUC-Osa-085667	Oryza sativa	83.85	8.00e-99	352.00
IUUC-Ola-086665	Oryzias latipes	40.35	7.00e-05	42.40
IUUC-Oar-089246	Ovis aries	41.30	4.00e-05	43.50
IUUC-Ppa-095340	Physcomitrella patens	47.56	1.00e-52	199.00
IUUC-Pfo-097469	Poecilia formosa	35.94	4.00e-06	46.60
IUUC-Pca-100264	Procavia capensis	35.00	2.00e-06	45.10
IUUC-Ppe-101521	Prunus persica	63.64	5.00e-87	312.00
IUUC-Pva-102345	Pteropus vampyrus	35.00	4.00e-06	44.30
IUUC-Rno-106092	Rattus norvegicus	35.00	2.00e-06	45.10
IUUC-Sha-106509	Sarcophilus harrisii	36.67	1.00e-06	45.80
IUUC-Smo-109392	Selaginella moellendorffii	40.99	2.00e-34	138.00
IUUC-Sit-110791	Setaria italica	92.34	8.00e-114	401.00
IUUC-Sar-113722	Sorex araneus	41.30	4.00e-05	43.50
IUUC-Tru-118270	Takifugu rubripes	37.50	5.00e-07	49.30
IUUC-Tni-120659	Tetraodon nigroviridis	37.50	1.00e-06	48.50
IUUC-Tca-121818	Theobroma cacao	64.79	3.00e-76	277.00
IUUC-Tae-124168	Triticum aestivum	80.46	5.00e-92	329.00
IUUC-Tur-126036	Triticum urartu	80.15	5.00e-96	342.00
IUUC-Tbe-127445	Tupaia belangeri	41.30	4.00e-05	43.50
IUUC-Vpa-130054	Vicugna pacos	41.30	4.00e-05	43.50
IUUC-Vvi-131684	Vitis vinifera	65.43	5.00e-83	299.00
IUUC-Xtr-132274	Xenopus tropicalis	41.30	4.00e-05	43.10
IUUC-Xma-133160	Xiphophorus maculatus	35.94	2.00e-06	47.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence