iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oar-089977

Ensembl Protein ID

ENSOARP00000004689.1

UniProt Accession

W5P2N9; W5P2N9_SHEEP

Genbank Protein ID

ENSOARP00000004689

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AMGL01028573

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOARG00000004380.1	ENSOART00000004770.1	ENSOARP00000004689.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-40	134.6	116	152
UBD/Beta-Prp	3.70e-57	193.9	239	409

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH+  v++++f  +dt  +sGs+Dgt+k+WD  +g  
   Q: 116  GHEHIVSSCNFcvDDTKALSGSYDGTVKLWDAMDGSI 152
           8***********777****************887765 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls......tg 84
            ++k+hh   +t+ +f pd++ +a+ s d++ik+wdvt++++l ++ + h+++++ ++f  +g +l t+s D+t+k+w++        g
   Q: 239  SCIKDHHMMSLTACCFDPDSQRVASVSFDRSIKIWDVTSQTTLLTItKAHNNAISNCCFTFSGHFLCTSSWDKTLKIWNVHtgefrnRG 327
           689***************************************99999*******************************99988888899 PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlk 167
            cv  ++ghe  v s++f +++++lvsG+ d+t+ +wd+e+g+     l+gh+++v+ v+++ +++ + s+s+DrtvrlW+++
   Q: 328  ACVTLMQGHEGCVSSCHFARDTSFLVSGGFDKTVAIWDVEEGYRKL-SLKGHNDWVMDVSISNNKKWILSASKDRTVRLWNIE 409
           9*********************************************.**********************************95 PP

Organism

Ovis aries

Protein Sequence
(Fasta)

MASQSQGTPR SSKKSGEDGK ETPQKSNLPL SLLHIRDVSH RQSSKLPWVD VVRACGRFRL 60
SLLQARRSRL LPSLNPLAVG DESPPPDTLW MPWMTQKVLW GDQEPLSKIP FKIMRGHEHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCCC AGTCCCAGGG TACCCCCCGC TCCTCAAAAA AATCCGGTGA GGATGGGAAG 60
GAGACGCCCC AGAAAAGTAA CTTGCCGCTC TCCTTGCTCC ACATCCGCGA CGTTTCACAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018391--PQQ_beta_propeller_repeat
IPR002372--PQQ_repeat
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13360--PQQ_2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00564--PQQ
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	81.59	3.00e-155	540.00
IUUC-Apl-003571	Anas platyrhynchos	56.23	1.00e-124	439.00
IUUC-Aca-005232	Anolis carolinensis	50.39	2.00e-79	288.00
IUUC-Ame-011833	Astyanax mexicanus	48.97	4.00e-54	203.00
IUUC-Bta-013562	Bos taurus	96.17	0.00e+00	877.00
IUUC-Cja-019202	Callithrix jacchus	71.75	0.00e+00	643.00
IUUC-Cfa-021095	Canis familiaris	70.09	0.00e+00	643.00
IUUC-Cpo-022170	Cavia porcellus	70.63	4.00e-178	617.00
IUUC-Csa-024218	Chlorocebus sabaeus	74.32	0.00e+00	664.00
IUUC-Cho-024561	Choloepus hoffmanni	74.65	3.00e-127	447.00
IUUC-Dno-029722	Dasypus novemcinctus	74.38	8.00e-157	546.00
IUUC-Dor-030464	Dipodomys ordii	67.39	1.00e-130	459.00
IUUC-Ete-032931	Echinops telfairi	60.87	1.00e-110	392.00
IUUC-Eca-034428	Equus caballus	85.11	0.00e+00	636.00
IUUC-Eeu-034568	Erinaceus europaeus	60.98	1.00e-122	432.00
IUUC-Fca-035707	Felis catus	69.11	0.00e+00	638.00
IUUC-Gmo-039646	Gadus morhua	44.05	4.00e-72	264.00
IUUC-Gga-040710	Gallus gallus	55.30	5.00e-117	414.00
IUUC-Ggo-044611	Gorilla gorilla	46.35	1.00e-96	346.00
IUUC-Hsa-046138	Homo sapiens	72.69	0.00e+00	649.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	62.45	1.00e-166	579.00
IUUC-Lch-050329	Latimeria chalumnae	51.85	9.00e-112	396.00
IUUC-Loc-052876	Lepisosteus oculatus	45.04	6.00e-32	130.00
IUUC-Laf-053777	Loxodonta africana	72.46	0.00e+00	652.00
IUUC-Mcc-055771	Macaca mulatta	74.82	0.00e+00	657.00
IUUC-Meu-056584	Macropus eugenii	46.96	1.00e-83	303.00
IUUC-Mga-059818	Meleagris gallopavo	53.75	2.00e-122	432.00
IUUC-Mmr-060639	Microcebus murinus	74.14	1.00e-158	551.00
IUUC-Mdo-062321	Monodelphis domestica	55.36	1.00e-135	476.00
IUUC-Mpu-066849	Mustela putorius furo	73.84	0.00e+00	636.00
IUUC-Mlu-067238	Myotis lucifugus	69.40	3.00e-171	594.00
IUUC-Ont-071230	Oreochromis niloticus	42.12	2.00e-79	289.00
IUUC-Oan-072698	Ornithorhynchus anatinus	62.78	7.00e-139	486.00
IUUC-Ocu-074219	Oryctolagus cuniculus	75.40	7.00e-171	592.00
IUUC-Oga-087913	Otolemur garnettii	67.21	1.00e-176	612.00
IUUC-Ptr-090876	Pan troglodytes	74.59	0.00e+00	654.00
IUUC-Pan-091936	Papio anubis	78.09	3.00e-115	407.00
IUUC-Psi-093015	Pelodiscus sinensis	53.20	6.00e-76	276.00
IUUC-Pma-094552	Petromyzon marinus	35.03	3.00e-32	130.00
IUUC-Pfo-096240	Poecilia formosa	41.82	3.00e-74	273.00
IUUC-Pab-097983	Pongo abelii	65.88	9.00e-163	566.00
IUUC-Pca-100752	Procavia capensis	59.19	1.00e-140	493.00
IUUC-Pva-102199	Pteropus vampyrus	65.12	1.00e-173	602.00
IUUC-Rno-106062	Rattus norvegicus	65.62	6.00e-167	580.00
IUUC-Sar-113167	Sorex araneus	53.24	3.00e-37	148.00
IUUC-Ssc-116089	Sus scrofa	78.64	0.00e+00	675.00
IUUC-Tur-126500	Triticum urartu	28.62	3.00e-22	99.80
IUUC-Tbe-127860	Tupaia belangeri	60.38	3.00e-164	571.00
IUUC-Ttr-129152	Tursiops truncatus	78.40	0.00e+00	644.00
IUUC-Vpa-130745	Vicugna pacos	69.73	0.00e+00	645.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence