iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114258

Ensembl Protein ID

Sb04g001330.1

UniProt Accession

C5XSC6; C5XSC6_SORBI

Genbank Protein ID

EES06162.1

Protein Name

Autophagy protein 5

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G013600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g001330	Sb04g001330.1	Sb04g001330.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/Other	23.81	7.00e-08	53.10	IUUC-Sce-106216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Functional Description
(View)

Required for autophagy.

Protein Sequence
(Fasta)

MAAPHDEAAA WSEEAARRVW AGAVPLQVHL HDADVTALPP PPAFLTLGPR IGYLPLLIPV 60
IKAHFSNALP PGVDTVWFEY KGLPLKWYVP IGALFDLLCA DPERPWNLIV HFRGYPSEIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCCC CGCACGACGA GGCCGCGGCG TGGTCCGAGG AGGCGGCGCG CCGGGTCTGG 60
GCCGGCGCCG TGCCGCTCCA GGTCCACCTC CACGACGCCG ACGTCACCGC ACTGCCCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0813--Transport
KW-0832--Ubl conjugation

Interpro

IPR007239--Atg5

Pfam

PF04106--APG5

Gene Ontology

GO:0034274--C:Atg12-Atg5-Atg16 complex
GO:0034045--C:pre-autophagosomal structure membrane
GO:0000045--P:autophagosome assembly
GO:0006501--P:C-terminal protein lipidation
GO:0006995--P:cellular response to nitrogen starvation
GO:0050832--P:defense response to fungus
GO:0010150--P:leaf senescence
GO:0000422--P:mitophagy
GO:0044804--P:nucleophagy
GO:0006810--P:transport

KEGG

sbi:SORBI_04g001330

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000583	Aegilops tauschii	70.66	1.00e-140	492.00
IUUC-Aml-002403	Ailuropoda melanoleuca	34.09	9.00e-28	116.00
IUUC-Atr-002645	Amborella trichopoda	51.66	2.00e-97	347.00
IUUC-Apl-003611	Anas platyrhynchos	32.20	4.00e-29	120.00
IUUC-Aca-004411	Anolis carolinensis	32.95	1.00e-26	112.00
IUUC-Aly-005636	Arabidopsis lyrata	51.56	9.00e-98	348.00
IUUC-Ath-006959	Arabidopsis thaliana	52.12	2.00e-96	344.00
IUUC-Ago-007978	Ashbya gossypii	23.91	4.00e-08	50.80
IUUC-Acl-008328	Aspergillus clavatus	26.72	2.00e-17	82.00
IUUC-Afl-008638	Aspergillus flavus	34.21	2.00e-25	108.00
IUUC-Afu-009042	Aspergillus fumigatus	34.39	1.00e-24	105.00
IUUC-Ani-009364	Aspergillus nidulans	32.09	3.00e-24	104.00
IUUC-Aor-009889	Aspergillus oryzae	34.21	2.00e-25	108.00
IUUC-Ate-010511	Aspergillus terreus	38.04	3.00e-11	59.30
IUUC-Ame-011644	Astyanax mexicanus	40.28	1.00e-09	53.10
IUUC-Bgr-012153	Blumeria graminis	29.56	2.00e-10	58.20
IUUC-Bta-012360	Bos taurus	36.49	6.00e-25	105.00
IUUC-Bci-013723	Botrytis cinerea	32.52	6.00e-15	73.60
IUUC-Bdi-014520	Brachypodium distachyon	75.71	5.00e-143	499.00
IUUC-Bol-016053	Brassica oleracea	48.73	9.00e-99	352.00
IUUC-Bra-017072	Brassica rapa	49.58	3.00e-100	357.00
IUUC-Cel-018529	Caenorhabditis elegans	26.05	1.00e-14	72.80
IUUC-Cja-019569	Callithrix jacchus	34.09	6.00e-28	117.00
IUUC-Cfa-020473	Canis familiaris	34.09	8.00e-28	116.00
IUUC-Cpo-021421	Cavia porcellus	34.66	3.00e-28	117.00
IUUC-Cre-022862	Chlamydomonas reinhardtii	29.82	2.00e-17	81.30
IUUC-Csa-024197	Chlorocebus sabaeus	34.09	5.00e-28	117.00
IUUC-Cho-024521	Choloepus hoffmanni	33.56	3.00e-21	94.40
IUUC-Cin-025119	Ciona intestinalis	31.28	5.00e-22	97.10
IUUC-Csv-026192	Ciona savignyi	34.73	3.00e-24	104.00
IUUC-Cgl-026686	Colletotrichum gloeosporioides	26.01	3.00e-06	44.70
IUUC-Dre-028466	Danio rerio	31.61	3.00e-25	107.00
IUUC-Dse-031228	Dothistroma septosporum	27.60	2.00e-21	95.10
IUUC-Dme-031703	Drosophila melanogaster	27.43	2.00e-19	88.60
IUUC-Ete-032482	Echinops telfairi	34.93	1.00e-23	102.00
IUUC-Eca-034036	Equus caballus	34.66	6.00e-28	116.00
IUUC-Eeu-035235	Erinaceus europaeus	37.16	2.00e-24	105.00
IUUC-Fca-036263	Felis catus	34.09	9.00e-28	116.00
IUUC-Fal-037064	Ficedula albicollis	32.20	1.00e-28	119.00
IUUC-Fox-037813	Fusarium oxysporum	28.07	1.00e-11	62.80
IUUC-Fso-038139	Fusarium solani	29.24	6.00e-12	63.50
IUUC-Gmo-039509	Gadus morhua	32.18	9.00e-28	115.00
IUUC-Ggr-040111	Gaeumannomyces graminis	25.38	2.00e-08	52.40
IUUC-Gga-040517	Gallus gallus	32.20	3.00e-28	117.00
IUUC-Gac-042270	Gasterosteus aculeatus	32.68	9.00e-27	112.00
IUUC-Gma-044400	Glycine max	61.81	6.00e-71	259.00
IUUC-Ggo-045048	Gorilla gorilla	34.09	2.00e-27	115.00
IUUC-Hsa-046744	Homo sapiens	34.09	6.00e-28	117.00
IUUC-Kpa-049174	Komagataella pastoris	25.93	7.00e-18	83.60
IUUC-Lch-049475	Latimeria chalumnae	32.11	2.00e-28	118.00
IUUC-Lpe-051283	Leersia perrieri	76.57	2.00e-149	522.00
IUUC-Loc-052446	Lepisosteus oculatus	30.68	8.00e-26	109.00
IUUC-Lma-053278	Leptosphaeria maculans	34.55	1.00e-24	105.00
IUUC-Laf-054020	Loxodonta africana	34.09	8.00e-28	116.00
IUUC-Mcc-055176	Macaca mulatta	34.09	6.00e-28	117.00
IUUC-Mor-057164	Magnaporthe oryzae	32.53	6.00e-15	73.90
IUUC-Mpo-057428	Magnaporthe poae	32.65	2.00e-08	52.00
IUUC-Mtr-058424	Medicago truncatula	57.97	5.00e-67	246.00
IUUC-Mla-058872	Melampsora laricipopulina	25.65	6.00e-12	64.30
IUUC-Mga-059859	Meleagris gallopavo	32.20	3.00e-28	117.00
IUUC-Mmr-061482	Microcebus murinus	34.09	1.00e-27	115.00
IUUC-Mdo-062371	Monodelphis domestica	33.68	2.00e-30	124.00
IUUC-Mmu-063139	Mus musculus	35.23	6.00e-28	116.00
IUUC-Mac-065332	Musa acuminata	54.72	5.00e-115	406.00
IUUC-Mpu-066783	Mustela putorius furo	34.66	2.00e-28	118.00
IUUC-Mlu-068165	Myotis lucifugus	34.09	1.00e-27	115.00
IUUC-Nfi-068578	Neosartorya fischeri	34.39	3.00e-25	108.00
IUUC-Ncr-068636	Neurospora crassa	28.07	9.00e-12	63.50
IUUC-Nle-069740	Nomascus leucogenys	34.09	6.00e-28	117.00
IUUC-Opr-070802	Ochotona princeps	36.49	4.00e-24	104.00
IUUC-Ont-072222	Oreochromis niloticus	32.18	3.00e-26	111.00
IUUC-Oan-072760	Ornithorhynchus anatinus	34.66	6.00e-31	126.00
IUUC-Ocu-074844	Oryctolagus cuniculus	27.08	2.90e-02	30.80
IUUC-Oba-075834	Oryza barthii	76.33	3.00e-155	540.00
IUUC-Obr-076230	Oryza brachyantha	70.63	2.00e-113	400.00
IUUC-Ogl-077554	Oryza glaberrima	76.06	7.00e-155	539.00
IUUC-Ogu-078687	Oryza glumaepatula	75.07	8.00e-152	528.00
IUUC-Oin-079677	Oryza indica	72.87	1.00e-144	504.00
IUUC-Olo-081078	Oryza longistaminata	75.75	1.00e-146	512.00
IUUC-Ome-081548	Oryza meridionalis	75.27	5.00e-159	553.00
IUUC-Oni-082050	Oryza nivara	76.33	1.00e-154	538.00
IUUC-Opu-083609	Oryza punctata	75.80	3.00e-155	540.00
IUUC-Oru-085057	Oryza rufipogon	76.60	2.00e-155	540.00
IUUC-Osa-085917	Oryza sativa	76.33	2.00e-154	537.00
IUUC-Ola-087032	Oryzias latipes	34.09	3.00e-26	110.00
IUUC-Oga-088468	Otolemur garnettii	34.66	4.00e-29	120.00
IUUC-Oar-089751	Ovis aries	34.09	2.00e-27	115.00
IUUC-Ptr-091064	Pan troglodytes	34.09	6.00e-28	117.00
IUUC-Pan-092505	Papio anubis	34.09	7.00e-28	116.00
IUUC-Psi-093086	Pelodiscus sinensis	35.23	1.00e-28	119.00
IUUC-Pno-094825	Phaeosphaeria nodorum	29.11	5.00e-19	87.00
IUUC-Ppa-095419	Physcomitrella patens	42.97	7.00e-82	296.00
IUUC-Pfo-096224	Poecilia formosa	35.23	2.00e-27	115.00
IUUC-Pab-098501	Pongo abelii	34.09	2.00e-27	115.00
IUUC-Pop-099243	Populus trichocarpa	53.54	4.00e-98	350.00
IUUC-Ppe-101255	Prunus persica	53.26	9.00e-104	369.00
IUUC-Pva-102828	Pteropus vampyrus	34.66	3.00e-28	117.00
IUUC-Pgr-103672	Puccinia graminis	24.83	1.00e-12	66.60
IUUC-Ptt-104013	Puccinia triticina	26.86	1.00e-12	66.60
IUUC-Pyt-104615	Pyrenophora triticirepentis	29.44	5.00e-19	87.40
IUUC-Rno-106089	Rattus norvegicus	34.44	1.00e-21	95.90
IUUC-Sce-106216	Saccharomyces cerevisiae	23.81	1.00e-08	52.80
IUUC-Sha-106484	Sarcophilus harrisii	34.74	3.00e-31	127.00
IUUC-Sja-107699	Schizosaccharomyces japonicus	27.12	3.00e-19	87.80
IUUC-Spo-108177	Schizosaccharomyces pombe	24.85	4.00e-15	73.90
IUUC-Ssl-108475	Sclerotinia sclerotiorum	31.14	9.00e-14	69.70
IUUC-Smo-109473	Selaginella moellendorffii	35.50	6.00e-59	219.00
IUUC-Sit-110736	Setaria italica	85.75	5.00e-168	582.00
IUUC-Sly-111657	Solanum lycopersicum	45.32	3.00e-104	370.00
IUUC-Sar-113050	Sorex araneus	34.93	9.00e-24	102.00
IUUC-Sre-114902	Sporisorium reilianum	26.70	2.00e-17	83.20
IUUC-Ssc-116166	Sus scrofa	34.59	3.00e-25	107.00
IUUC-Tgu-116814	Taeniopygia guttata	32.20	3.00e-28	117.00
IUUC-Tru-118172	Takifugu rubripes	30.24	8.00e-25	106.00
IUUC-Tsy-119010	Tarsius syrichta	34.66	3.00e-30	124.00
IUUC-Tni-120397	Tetraodon nigroviridis	32.63	2.00e-26	111.00
IUUC-Tca-121283	Theobroma cacao	52.97	9.00e-106	375.00
IUUC-Tvi-122545	Trichoderma virens	29.82	6.00e-14	70.10
IUUC-Tae-122685	Triticum aestivum	77.04	2.00e-119	420.00
IUUC-Tur-126407	Triticum urartu	74.70	2.00e-144	504.00
IUUC-Tme-126913	Tuber melanosporum	32.60	2.00e-25	108.00
IUUC-Tbe-127738	Tupaia belangeri	29.81	1.00e-11	62.00
IUUC-Ttr-128528	Tursiops truncatus	34.09	2.00e-27	115.00
IUUC-Uma-129625	Ustilago maydis	26.70	2.00e-17	83.20
IUUC-Vda-129906	Verticillium dahliae	26.90	1.00e-06	45.80
IUUC-Vpa-130223	Vicugna pacos	34.29	2.00e-27	114.00
IUUC-Vvi-131617	Vitis vinifera	51.12	5.00e-102	363.00
IUUC-Xtr-132288	Xenopus tropicalis	33.52	3.00e-28	117.00
IUUC-Xma-134214	Xiphophorus maculatus	35.23	5.00e-28	116.00
IUUC-Yli-134377	Yarrowia lipolytica	30.43	1.00e-05	42.70
IUUC-Zma-135108	Zea mays	84.18	3.00e-165	573.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence