iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000004093.7	ENSRNOT00000005428.7	ENSRNOP00000005428.7
ENSRNOG00000004093.7	ENSRNOT00000082685.1	ENSRNOP00000074094.1
ENSRNOG00000004093.7	ENSRNOT00000006218.5	ENSRNOP00000006218.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-06	29.0	21	67

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkw.pglknssskefrCPlCr 46
           C+iC+  ++  p +lpCgH f+++Cl   w   +  + s  + CP+Cr
   Q: 21   CIICQGLLDW-PTTLPCGHSFCLQCLkDLWvSKRAGVDSCPWACPICR 67
           ********99.999************77776555566777789999*8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAAACPGTAV PVWLSEEDLS CIICQGLLDW PTTLPCGHSF CLQCLKDLWV SKRAGVDSCP 60
WACPICRKGP SAKPVLHKNP LLQDLVDKYR QAALELEAGP EPAPVPRSLC TPTPPQVTVQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGCCG CTTGTCCTGG CACCGCAGTA CCGGTATGGC TGAGCGAGGA AGACCTGAGC 60
TGCATTATCT GCCAAGGACT GCTGGACTGG CCCACCACCC TGCCCTGCGG CCACAGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002251	Ailuropoda melanoleuca	57.19	8.00e-90	323.00
IUUC-Apl-003301	Anas platyrhynchos	45.90	3.00e-38	150.00
IUUC-Aca-004520	Anolis carolinensis	40.00	2.00e-32	131.00
IUUC-Bta-012846	Bos taurus	53.85	2.00e-111	395.00
IUUC-Cja-019096	Callithrix jacchus	58.99	8.00e-128	450.00
IUUC-Cfa-020135	Canis familiaris	50.23	3.00e-106	378.00
IUUC-Cpo-022042	Cavia porcellus	50.00	1.00e-96	346.00
IUUC-Csa-024154	Chlorocebus sabaeus	58.51	1.00e-132	466.00
IUUC-Cho-024619	Choloepus hoffmanni	51.82	1.00e-76	279.00
IUUC-Dre-027925	Danio rerio	44.80	2.00e-23	103.00
IUUC-Dno-028856	Dasypus novemcinctus	54.09	1.00e-110	393.00
IUUC-Eca-033795	Equus caballus	52.91	5.00e-108	384.00
IUUC-Eeu-035078	Erinaceus europaeus	55.79	4.00e-124	437.00
IUUC-Fca-035503	Felis catus	67.51	2.00e-76	278.00
IUUC-Fal-036914	Ficedula albicollis	47.79	6.00e-33	132.00
IUUC-Ggo-045197	Gorilla gorilla	60.11	7.00e-114	403.00
IUUC-Hsa-046550	Homo sapiens	59.91	6.00e-142	497.00
IUUC-Itr-049007	Ictidomys tridecemlineatus	55.16	2.00e-129	456.00
IUUC-Kpa-049392	Komagataella pastoris	35.48	2.00e-10	59.70
IUUC-Laf-053812	Loxodonta africana	55.89	1.00e-118	419.00
IUUC-Mcc-055777	Macaca mulatta	58.74	1.00e-131	462.00
IUUC-Meu-056473	Macropus eugenii	51.14	1.00e-41	164.00
IUUC-Mmr-061016	Microcebus murinus	58.49	1.00e-129	456.00
IUUC-Mmu-063129	Mus musculus	76.08	0.00e+00	630.00
IUUC-Mpu-065938	Mustela putorius furo	56.12	2.00e-108	385.00
IUUC-Mlu-067911	Myotis lucifugus	50.23	4.00e-106	378.00
IUUC-Opr-071118	Ochotona princeps	48.56	1.00e-64	239.00
IUUC-Oan-073277	Ornithorhynchus anatinus	41.09	2.00e-67	249.00
IUUC-Ocu-074512	Oryctolagus cuniculus	58.61	6.00e-92	330.00
IUUC-Oga-089086	Otolemur garnettii	60.67	3.00e-134	471.00
IUUC-Oar-089493	Ovis aries	61.11	3.00e-73	267.00
IUUC-Ptr-090466	Pan troglodytes	60.19	8.00e-137	480.00
IUUC-Pan-091817	Papio anubis	58.74	2.00e-131	461.00
IUUC-Psi-093151	Pelodiscus sinensis	35.94	4.00e-47	182.00
IUUC-Pab-098342	Pongo abelii	60.14	2.00e-141	495.00
IUUC-Pca-101052	Procavia capensis	44.17	4.00e-48	184.00
IUUC-Pva-103178	Pteropus vampyrus	58.86	5.00e-92	331.00
IUUC-Ssc-115925	Sus scrofa	55.27	2.00e-114	405.00
IUUC-Tgu-116757	Taeniopygia guttata	53.62	3.00e-35	140.00
IUUC-Ttr-128972	Tursiops truncatus	44.65	2.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence