iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112762

Ensembl Protein ID

PGSC0003DMT400021581

UniProt Accession

M1AFC8; M1AFC8_SOLTU

Protein Name

PHD finger protein ING

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400008367	PGSC0003DMT400021581	PGSC0003DMT400021581

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.40e-09	37.6	205	255

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++ + ++  ++ C++  C+  ewfH++C++l+  e++ +  kw+Cp Cr+
   Q: 205  TYC-VCHQVSFGD--MIACDNenCQggEWFHYTCVGLT-PETRFKG-KWYCPTCRQ 255
           69*.********9..*****999*999***********.4444444.4******97 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAIARTGVFV DDYLEYSSTL PAELQRLLNT IRELDERSQG IINQTRQQTN YCLGLASQSQ 60
GSRKYNYDDD EAFEKLRKEI EGNQDNALSL CTEKVLLARQ AHDIIDSHIK RLDEDLTNFA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTTATTCTT ATATTTCCGA AATTTTCTTC CCTCCTCTTC TTCCTTGGCC TCTGCAAAAC 60
CCTAGATCGT AATTCAATTT CCGACAACAA TGGCGATCGC CAGAACCGGA GTTTTCGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

sot:102586676

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002435	Amborella trichopoda	74.41	2.00e-99	353.00
IUUC-Ath-006578	Arabidopsis thaliana	76.14	5.00e-103	365.00
IUUC-Bdi-014508	Brachypodium distachyon	66.93	4.00e-95	339.00
IUUC-Bol-015751	Brassica oleracea	76.72	9.00e-107	378.00
IUUC-Bra-017962	Brassica rapa	77.74	8.00e-107	378.00
IUUC-Dse-031323	Dothistroma septosporum	59.65	1.00e-16	80.50
IUUC-Gma-044224	Glycine max	77.36	1.00e-106	377.00
IUUC-Hvu-047275	Hordeum vulgare	66.67	1.00e-96	344.00
IUUC-Lpe-051512	Leersia perrieri	64.98	1.00e-92	331.00
IUUC-Mtr-058288	Medicago truncatula	74.53	2.00e-110	390.00
IUUC-Mac-065671	Musa acuminata	73.73	9.00e-107	378.00
IUUC-Mlu-067754	Myotis lucifugus	33.96	8.00e-33	132.00
IUUC-Obr-076822	Oryza brachyantha	69.26	1.00e-101	361.00
IUUC-Ogl-077432	Oryza glaberrima	68.87	2.00e-101	360.00
IUUC-Osa-085802	Oryza sativa	68.87	2.00e-101	360.00
IUUC-Olu-087851	Ostreococcus lucimarinus	61.11	2.00e-17	80.90
IUUC-Ppa-096009	Physcomitrella patens	59.70	3.00e-85	306.00
IUUC-Pop-099544	Populus trichocarpa	77.53	3.00e-105	373.00
IUUC-Ppe-101698	Prunus persica	75.94	2.00e-99	353.00
IUUC-Smo-108678	Selaginella moellendorffii	63.28	1.00e-85	308.00
IUUC-Sit-110189	Setaria italica	69.92	4.00e-99	352.00
IUUC-Sly-111209	Solanum lycopersicum	99.61	1.00e-131	460.00
IUUC-Sbi-114379	Sorghum bicolor	68.75	2.00e-100	357.00
IUUC-Tca-121271	Theobroma cacao	80.00	1.00e-109	387.00
IUUC-Tre-121950	Trichoderma reesei	58.73	2.00e-18	86.70
IUUC-Tae-122798	Triticum aestivum	67.05	4.00e-97	346.00
IUUC-Vvi-131583	Vitis vinifera	83.01	2.00e-112	396.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence