iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087429

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04020999

Gene Name

usp30

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000007104.1	ENSORLT00000008916.1	ENSORLP00000008915.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.30e-62	210.9	69	492

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgye 88
           Gl NlgNtC++N++LQ L+++p++ + l +   + l+   ++ ++++l+++l +l+++l   +  + + +   ll++l+ +  ++s++e
   Q: 69   GLLNLGNTCFLNALLQGLAACPSFVRWLEK--FSGLPSI-QSCKDNQLSTTLLQLLKALSsdEPGEDVLDAGCLLDVLRLYRWHISSFE 154
           9***************************99..4445543.368899*************95555566888888**************** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsde..........aeekkkkknkslisdlFqgqlksqikclecdnvs..sr 165
           +qDa+E+++++ ++leee    ++ +++++++ +  e+  +          +   ++  ++   ++ F+g+l+s++ c++c++ +  +r
   Q: 155  EQDAHELFHVITSSLEEER--DRQPKVTHLFDVQFLESFPNqddkaltcisRAPLHPLPGSWKFQHPFHGRLTSNMSCKRCETHQspVR 241
           *******************..45666666666664444333234555555555556666669*******************9887799* PP
   S: 166  eepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqe...............aekklklkklPevLilhLkRfsf 239
           +++f +lsl++   +   + sl++cL++f + e++++   ++ce+c+k+q+                +k+l+l klP++L++hL+R  +
   Q: 242  YDSFESLSLSILLPQWGRPISLDQCLQHFISSETIKE---VECENCTKLQQhssingqllesqrttFVKQLRLGKLPQCLCIHLQRLMW 327
           ***********************************97...99*****9999999999999999999*********************** PP
   S: 240  seeqksrekinkkvefpleLdlspfcts.....................................peekqke................. 274
           s+e +s++k +++v+f + L+++++ ++                                     +     +                 
   Q: 328  SNE-GSPIKRQEHVQFSEYLSMDRYKHDsstlrtqrvrcapktikaesfdsieksmangtehhnnN-----Kpflngtcssmflgsgvk 410
           998.999*****************999966676777766666666666666666666665555550.....055555555555555555 PP
   S: 275  .............kkkYeLiavvvHsGslssGHYvayvkn.........ekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
                        ++ ++L+av+vH G ++sGH+v+y ++          + +Wl ++D++V++ + +e l+   s+aY+lfY+r
   Q: 411  npfglthhdnssaEYLFQLVAVLVHLGDMHSGHFVTYRRSpsssrsssnFSSQWLWVSDDSVRKASLQEALS---SNAYMLFYER 492
           55555555555559**************************8777776555666*******************...********98 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MLSEEVQFKH RSCDKLVGRF LGTGSVIRNK MIKNWGVIGG IAAAVAAGVY VLWGPITVKK 60
KRKKGMSPGL LNLGNTCFLN ALLQGLAACP SFVRWLEKFS GLPSIQSCKD NQLSTTLLQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTTCAG AGGAGGTGCA ATTTAAGAAA AATCCTCAGC TTCAGGTATT TTAATCCATA 60
GAAATGAACA GGACAAGAAC TACCTGTTGG ATTAAAATAA ACAGTGCTAG TGGAGTTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000204	Aegilops tauschii	26.71	8.00e-11	61.60
IUUC-Aml-001733	Ailuropoda melanoleuca	55.49	9.00e-141	493.00
IUUC-Atr-002510	Amborella trichopoda	24.51	3.00e-16	80.10
IUUC-Apl-003645	Anas platyrhynchos	56.13	2.00e-77	282.00
IUUC-Aca-004583	Anolis carolinensis	58.11	2.00e-16	76.60
IUUC-Aly-005754	Arabidopsis lyrata	25.32	4.00e-19	89.40
IUUC-Ath-007622	Arabidopsis thaliana	27.80	4.00e-23	102.00
IUUC-Ame-010896	Astyanax mexicanus	70.27	5.00e-170	590.00
IUUC-Bta-012321	Bos taurus	56.88	3.00e-142	498.00
IUUC-Bdi-014795	Brachypodium distachyon	25.88	3.00e-14	73.20
IUUC-Bol-015637	Brassica oleracea	25.36	1.00e-18	87.80
IUUC-Bra-016801	Brassica rapa	26.59	4.00e-18	85.90
IUUC-Cel-018308	Caenorhabditis elegans	25.75	2.00e-31	130.00
IUUC-Cja-018826	Callithrix jacchus	57.06	5.00e-146	510.00
IUUC-Cfa-021206	Canis familiaris	54.51	2.00e-140	492.00
IUUC-Cpo-021343	Cavia porcellus	57.11	5.00e-141	494.00
IUUC-Csa-023419	Chlorocebus sabaeus	57.65	5.00e-146	510.00
IUUC-Cho-024475	Choloepus hoffmanni	53.24	4.00e-72	265.00
IUUC-Cne-027061	Cryptococcus neoformans	25.49	5.00e-09	56.60
IUUC-Dre-027563	Danio rerio	67.27	3.00e-172	597.00
IUUC-Dno-029929	Dasypus novemcinctus	56.89	2.00e-141	496.00
IUUC-Dor-030166	Dipodomys ordii	52.19	4.00e-90	325.00
IUUC-Dme-031627	Drosophila melanogaster	32.13	1.00e-30	127.00
IUUC-Ete-032634	Echinops telfairi	56.16	7.00e-132	463.00
IUUC-Eca-033968	Equus caballus	57.76	5.00e-139	487.00
IUUC-Eeu-035279	Erinaceus europaeus	62.20	7.00e-43	168.00
IUUC-Fca-036525	Felis catus	55.62	5.00e-145	507.00
IUUC-Fal-036606	Ficedula albicollis	56.15	2.00e-115	408.00
IUUC-Gmo-038726	Gadus morhua	66.20	3.00e-169	587.00
IUUC-Gga-040718	Gallus gallus	57.51	2.00e-116	412.00
IUUC-Gac-042645	Gasterosteus aculeatus	75.96	0.00e+00	676.00
IUUC-Gma-042890	Glycine max	24.66	3.00e-20	93.20
IUUC-Ggo-045021	Gorilla gorilla	57.45	2.00e-145	508.00
IUUC-Hsa-045832	Homo sapiens	57.45	2.00e-145	508.00
IUUC-Itr-048392	Ictidomys tridecemlineatus	56.94	6.00e-138	483.00
IUUC-Lch-050662	Latimeria chalumnae	60.25	3.00e-142	498.00
IUUC-Lpe-051078	Leersia perrieri	25.57	3.00e-23	102.00
IUUC-Loc-052611	Lepisosteus oculatus	63.01	2.00e-168	585.00
IUUC-Laf-053752	Loxodonta africana	56.67	5.00e-137	480.00
IUUC-Mcc-054892	Macaca mulatta	57.45	2.00e-145	508.00
IUUC-Meu-056673	Macropus eugenii	54.22	2.00e-102	365.00
IUUC-Mor-057143	Magnaporthe oryzae	21.27	2.00e-09	57.80
IUUC-Mtr-057976	Medicago truncatula	25.93	2.00e-25	110.00
IUUC-Mla-058970	Melampsora laricipopulina	23.14	3.00e-16	79.70
IUUC-Mga-059543	Meleagris gallopavo	58.52	6.00e-136	477.00
IUUC-Mmr-061534	Microcebus murinus	54.91	4.00e-142	498.00
IUUC-Mdo-062140	Monodelphis domestica	48.81	2.00e-114	405.00
IUUC-Mmu-063673	Mus musculus	56.75	2.00e-139	489.00
IUUC-Mpu-066328	Mustela putorius furo	56.76	1.00e-142	499.00
IUUC-Mlu-067938	Myotis lucifugus	55.69	2.00e-147	515.00
IUUC-Nle-069426	Nomascus leucogenys	57.01	8.00e-128	450.00
IUUC-Opr-070796	Ochotona princeps	51.89	2.00e-61	229.00
IUUC-Ont-072248	Oreochromis niloticus	82.58	0.00e+00	729.00
IUUC-Oan-072916	Ornithorhynchus anatinus	60.63	4.00e-149	521.00
IUUC-Ocu-074459	Oryctolagus cuniculus	57.87	6.00e-113	400.00
IUUC-Oba-075765	Oryza barthii	26.67	1.00e-24	107.00
IUUC-Obr-076005	Oryza brachyantha	27.70	5.00e-25	108.00
IUUC-Ogl-077916	Oryza glaberrima	28.60	2.00e-28	120.00
IUUC-Ogu-078263	Oryza glumaepatula	26.87	3.00e-25	109.00
IUUC-Oin-080096	Oryza indica	26.62	2.00e-17	83.60
IUUC-Ome-081928	Oryza meridionalis	27.99	2.00e-25	110.00
IUUC-Oni-082424	Oryza nivara	26.87	2.00e-25	110.00
IUUC-Oru-085117	Oryza rufipogon	26.87	2.00e-25	110.00
IUUC-Oga-087981	Otolemur garnettii	55.49	5.00e-143	500.00
IUUC-Oar-089927	Ovis aries	57.09	4.00e-143	501.00
IUUC-Ptr-090878	Pan troglodytes	57.45	2.00e-145	508.00
IUUC-Pan-092698	Papio anubis	57.45	2.00e-145	508.00
IUUC-Psi-093451	Pelodiscus sinensis	58.40	5.00e-142	497.00
IUUC-Ppa-096015	Physcomitrella patens	24.33	4.00e-11	63.20
IUUC-Pfo-096096	Poecilia formosa	80.40	0.00e+00	717.00
IUUC-Pab-098676	Pongo abelii	56.86	2.00e-142	498.00
IUUC-Pca-100418	Procavia capensis	61.51	2.00e-82	299.00
IUUC-Ppe-101898	Prunus persica	25.86	9.00e-19	88.20
IUUC-Pva-103018	Pteropus vampyrus	54.04	2.00e-138	485.00
IUUC-Pgr-103686	Puccinia graminis	22.69	4.00e-10	59.70
IUUC-Pyt-104518	Pyrenophora triticirepentis	23.17	8.00e-14	72.40
IUUC-Rno-105708	Rattus norvegicus	54.35	1.00e-139	489.00
IUUC-Sha-106971	Sarcophilus harrisii	56.63	3.00e-146	511.00
IUUC-Sit-110442	Setaria italica	25.69	5.00e-20	92.00
IUUC-Ssc-116397	Sus scrofa	55.51	5.00e-143	501.00
IUUC-Tgu-117446	Taeniopygia guttata	55.21	6.00e-136	477.00
IUUC-Tru-118268	Takifugu rubripes	68.40	1.00e-170	592.00
IUUC-Tsy-119484	Tarsius syrichta	62.00	1.00e-24	107.00
IUUC-Tni-119735	Tetraodon nigroviridis	66.26	5.00e-152	530.00
IUUC-Tca-121660	Theobroma cacao	26.60	4.00e-26	112.00
IUUC-Tae-125203	Triticum aestivum	27.31	4.00e-21	96.30
IUUC-Tur-126458	Triticum urartu	26.38	1.00e-19	91.30
IUUC-Tbe-127740	Tupaia belangeri	51.54	5.00e-124	437.00
IUUC-Ttr-129273	Tursiops truncatus	58.20	4.00e-139	487.00
IUUC-Vvi-131177	Vitis vinifera	25.05	2.00e-21	97.40
IUUC-Xtr-132374	Xenopus tropicalis	58.04	9.00e-145	506.00
IUUC-Xma-133267	Xiphophorus maculatus	81.91	0.00e+00	729.00
IUUC-Yli-134426	Yarrowia lipolytica	26.15	1.00e-05	45.10
IUUC-Zma-135796	Zea mays	24.58	1.00e-19	91.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence