iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggo-045642

Ensembl Protein ID

ENSGGOP00000016194.2

UniProt Accession

G3RKC9; G3RKC9_GORGO

Protein Name

Uncharacterized protein

Gene Name

SLX4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000016599.2	ENSGGOT00000028059.1	ENSGGOP00000028485.1
ENSGGOG00000016599.2	ENSGGOT00000016653.2	ENSGGOP00000016194.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	8.70e-11	42.2	219	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 2    lvCPvCqkm...vdqtdfeeHlDeCl 24
           ++C++Cqk    +++t++e+H+++Cl
   Q: 219  FFCQICQKNlsaMNVTRREQHVNRCL 244
           89***********************8 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MKLSVNEAQL GFYLGSLSHL SACPGIDPRS SEDQPERLKT GQMMDESDED FKELCASFFQ 60
RVKKHGIKEV SGERKTQKAT SNGTQIRSKL KRTKQTATKT KTLQGPAEKK PPSGSQAPRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAACTGA GTGTGAATGA GGCTCAGCTA GGCTTCTACT TGGGTTCACT GTCTCATCTG 60
TCTGCCTGTC CTGGGATTGA CCCTCGCTCC TCTGAAGACC AGCCTGAAAG ACTTAAAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR018574--Structure-sp_endonuc_su_Slx4

PROSITE

PS50097--BTB

Pfam

PF00651--BTB
PF09494--Slx4

SMART

SM00225--BTB

Gene Ontology

GO:0030054--C:cell junction
GO:0005829--C:cytosol
GO:0070522--C:ERCC4-ERCC1 complex
GO:0048476--C:Holliday junction resolvase complex
GO:0000790--C:nuclear chromatin
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005654--C:nucleoplasm
GO:0033557--C:Slx1-Slx4 complex
GO:0048257--F:3'-flap endonuclease activity
GO:0017108--F:5'-flap endonuclease activity
GO:0008821--F:crossover junction endodeoxyribonuclease activity
GO:0008047--F:enzyme activator activity
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0006260--P:DNA replication
GO:0000724--P:double-strand break repair via homologous recombination
GO:1904357--P:negative regulation of telomere maintenance via telomere lengthening
GO:0006289--P:nucleotide-excision repair
GO:1904431--P:positive regulation of t-circle formation
GO:0072429--P:response to intra-S DNA damage checkpoint signaling
GO:0090656--P:t-circle formation
GO:0061820--P:telomeric D-loop disassembly

KEGG

ggo:101136238

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001225	Ailuropoda melanoleuca	61.87	0.00e+00	1320.00
IUUC-Apl-003261	Anas platyrhynchos	40.97	1.00e-135	478.00
IUUC-Aca-004455	Anolis carolinensis	61.40	5.00e-16	75.10
IUUC-Acl-008026	Aspergillus clavatus	25.51	1.20e-02	35.80
IUUC-Ame-010993	Astyanax mexicanus	27.98	1.00e-11	62.80
IUUC-Bta-013472	Bos taurus	59.75	0.00e+00	1206.00
IUUC-Bdi-014556	Brachypodium distachyon	35.16	5.00e-06	45.10
IUUC-Cel-018663	Caenorhabditis elegans	28.77	4.00e-03	37.00
IUUC-Cja-019406	Callithrix jacchus	84.28	0.00e+00	2051.00
IUUC-Cfa-020129	Canis familiaris	60.07	0.00e+00	1433.00
IUUC-Cpo-021944	Cavia porcellus	55.09	0.00e+00	1245.00
IUUC-Csa-023941	Chlorocebus sabaeus	88.24	0.00e+00	1311.00
IUUC-Cho-024847	Choloepus hoffmanni	59.40	1.00e-115	411.00
IUUC-Cin-025405	Ciona intestinalis	46.91	3.00e-08	52.80
IUUC-Csv-025916	Ciona savignyi	38.98	1.00e-08	53.10
IUUC-Dre-027764	Danio rerio	34.20	5.00e-73	270.00
IUUC-Dno-030083	Dasypus novemcinctus	56.28	0.00e+00	1267.00
IUUC-Dor-031129	Dipodomys ordii	52.47	0.00e+00	1064.00
IUUC-Dse-031510	Dothistroma septosporum	38.89	2.40e-02	35.00
IUUC-Ete-032536	Echinops telfairi	46.50	3.00e-123	436.00
IUUC-Eca-033407	Equus caballus	64.84	0.00e+00	1386.00
IUUC-Eeu-034473	Erinaceus europaeus	51.48	9.00e-58	219.00
IUUC-Fca-035730	Felis catus	60.89	0.00e+00	1392.00
IUUC-Fal-036850	Ficedula albicollis	45.37	4.00e-127	450.00
IUUC-Gmo-038677	Gadus morhua	43.35	3.00e-39	156.00
IUUC-Gga-041088	Gallus gallus	39.73	7.00e-118	419.00
IUUC-Gac-041824	Gasterosteus aculeatus	43.24	7.00e-13	67.00
IUUC-Hsa-047035	Homo sapiens	97.66	0.00e+00	2511.00
IUUC-Hvu-047552	Hordeum vulgare	34.23	2.00e-06	46.20
IUUC-Itr-049010	Ictidomys tridecemlineatus	64.35	0.00e+00	1462.00
IUUC-Kpa-049328	Komagataella pastoris	29.41	1.00e-03	38.50
IUUC-Lch-050364	Latimeria chalumnae	41.98	3.00e-79	290.00
IUUC-Loc-052423	Lepisosteus oculatus	36.62	7.00e-47	183.00
IUUC-Lma-053057	Leptosphaeria maculans	29.17	1.30e-01	31.60
IUUC-Laf-053910	Loxodonta africana	58.16	0.00e+00	1291.00
IUUC-Mcc-055883	Macaca mulatta	89.86	0.00e+00	2367.00
IUUC-Meu-056224	Macropus eugenii	52.24	3.00e-90	327.00
IUUC-Mga-059880	Meleagris gallopavo	45.14	9.00e-124	438.00
IUUC-Mvi-060510	Microbotryum violaceum	32.73	1.00e-03	39.30
IUUC-Mmr-061715	Microcebus murinus	69.90	0.00e+00	1753.00
IUUC-Mdo-062426	Monodelphis domestica	46.10	0.00e+00	655.00
IUUC-Mmu-063947	Mus musculus	56.40	0.00e+00	1320.00
IUUC-Mpu-066184	Mustela putorius furo	61.73	0.00e+00	864.00
IUUC-Mlu-067533	Myotis lucifugus	63.20	0.00e+00	1424.00
IUUC-Nle-069204	Nomascus leucogenys	93.06	0.00e+00	2446.00
IUUC-Opr-070377	Ochotona princeps	66.62	0.00e+00	738.00
IUUC-Ont-072551	Oreochromis niloticus	33.81	4.00e-60	227.00
IUUC-Oan-073350	Ornithorhynchus anatinus	60.71	7.00e-84	304.00
IUUC-Ocu-074915	Oryctolagus cuniculus	59.48	0.00e+00	848.00
IUUC-Ola-087360	Oryzias latipes	73.21	2.00e-19	89.40
IUUC-Oga-089106	Otolemur garnettii	62.42	0.00e+00	1413.00
IUUC-Oar-089289	Ovis aries	58.52	0.00e+00	773.00
IUUC-Ptr-091469	Pan troglodytes	97.85	0.00e+00	2496.00
IUUC-Pan-091841	Papio anubis	89.92	0.00e+00	2151.00
IUUC-Psi-093842	Pelodiscus sinensis	47.39	3.00e-93	337.00
IUUC-Pma-094732	Petromyzon marinus	55.77	4.00e-09	54.30
IUUC-Pfo-097299	Poecilia formosa	37.90	3.00e-31	131.00
IUUC-Pab-098271	Pongo abelii	94.64	0.00e+00	2417.00
IUUC-Pca-100721	Procavia capensis	56.95	0.00e+00	747.00
IUUC-Pva-102276	Pteropus vampyrus	66.08	0.00e+00	1630.00
IUUC-Rno-105619	Rattus norvegicus	56.47	0.00e+00	1387.00
IUUC-Sha-106722	Sarcophilus harrisii	45.88	0.00e+00	974.00
IUUC-Sar-113673	Sorex araneus	46.06	3.00e-85	310.00
IUUC-Sre-115039	Sporisorium reilianum	33.90	1.00e-04	40.00
IUUC-Ssc-115383	Sus scrofa	57.60	0.00e+00	1211.00
IUUC-Tgu-117243	Taeniopygia guttata	49.00	7.00e-92	330.00
IUUC-Tru-118092	Takifugu rubripes	39.39	3.00e-30	125.00
IUUC-Tsy-119362	Tarsius syrichta	67.84	0.00e+00	730.00
IUUC-Tni-120380	Tetraodon nigroviridis	68.12	4.00e-21	94.70
IUUC-Tbe-127404	Tupaia belangeri	51.62	0.00e+00	738.00
IUUC-Ttr-128317	Tursiops truncatus	65.12	0.00e+00	1333.00
IUUC-Uma-129640	Ustilago maydis	33.96	2.00e-03	36.20
IUUC-Xtr-132533	Xenopus tropicalis	41.87	3.00e-88	320.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence