iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050112

Ensembl Protein ID

ENSLACP00000003343.1

UniProt Accession

H3A122; H3A122_LATCH

Genbank Protein ID

ENSLACP00000003343

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01248573

Gene Name

RFWD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000002991.1	ENSLACT00000003373.1	ENSLACP00000003343.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	64.47	0.00e+00	668.00	IUUC-Hsa-045991

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MEVDLQQVAD YVTVSHQESL PLHSHDTHSV SIPEFPQESN PDANPGAHSG DGELFVGDVP 60
RTAQPNLLSS HESRRLTAGQ RRGVGQGLGT QQRQRVQRRS TRNRRTANAS QRTVATNSQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGCTTA AGTTTTATGT TACACCCATG TTCCGTCTTT TTTCAGAAAT GGCCCAGGAG 60
GAAATGGAAG TGGACCTCCA GCAAGTAGCT GACTATGTTA CTGTTTCACA CCAAGAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000929	Aegilops tauschii	25.10	1.00e-19	91.30
IUUC-Aml-001188	Ailuropoda melanoleuca	66.86	0.00e+00	724.00
IUUC-Atr-003034	Amborella trichopoda	26.82	9.00e-18	84.00
IUUC-Apl-003182	Anas platyrhynchos	71.81	0.00e+00	756.00
IUUC-Aca-004619	Anolis carolinensis	74.40	0.00e+00	782.00
IUUC-Aly-006391	Arabidopsis lyrata	25.31	1.00e-30	127.00
IUUC-Ath-007300	Arabidopsis thaliana	25.59	2.00e-33	137.00
IUUC-Ame-010890	Astyanax mexicanus	67.61	0.00e+00	701.00
IUUC-Bta-013051	Bos taurus	64.27	0.00e+00	706.00
IUUC-Bdi-014519	Brachypodium distachyon	24.94	2.00e-24	107.00
IUUC-Bol-015271	Brassica oleracea	28.25	9.00e-32	131.00
IUUC-Bra-017931	Brassica rapa	28.25	2.00e-32	133.00
IUUC-Cja-019240	Callithrix jacchus	65.80	0.00e+00	699.00
IUUC-Cfa-021010	Canis familiaris	66.09	0.00e+00	718.00
IUUC-Cpo-022308	Cavia porcellus	62.10	0.00e+00	663.00
IUUC-Csa-023501	Chlorocebus sabaeus	65.31	0.00e+00	702.00
IUUC-Cho-024900	Choloepus hoffmanni	59.73	0.00e+00	630.00
IUUC-Cin-025403	Ciona intestinalis	36.71	1.00e-93	337.00
IUUC-Csv-025819	Ciona savignyi	36.92	3.00e-44	171.00
IUUC-Cme-027123	Cyanidioschyzon merolae	24.02	3.00e-18	86.70
IUUC-Dre-028354	Danio rerio	62.83	1.00e-180	626.00
IUUC-Dno-029400	Dasypus novemcinctus	66.15	0.00e+00	709.00
IUUC-Dor-030320	Dipodomys ordii	58.70	1.00e-172	599.00
IUUC-Dme-031949	Drosophila melanogaster	28.15	3.00e-42	166.00
IUUC-Ete-032691	Echinops telfairi	53.90	6.00e-86	311.00
IUUC-Eca-034320	Equus caballus	65.37	0.00e+00	717.00
IUUC-Fca-035732	Felis catus	65.52	0.00e+00	729.00
IUUC-Fal-036648	Ficedula albicollis	72.57	0.00e+00	758.00
IUUC-Gmo-038609	Gadus morhua	60.61	2.00e-150	525.00
IUUC-Gga-040522	Gallus gallus	70.29	2.00e-113	402.00
IUUC-Gac-042318	Gasterosteus aculeatus	60.53	8.00e-147	513.00
IUUC-Gma-043184	Glycine max	26.57	2.00e-29	123.00
IUUC-Ggo-044464	Gorilla gorilla	65.12	0.00e+00	698.00
IUUC-Hsa-045991	Homo sapiens	64.92	0.00e+00	697.00
IUUC-Hvu-047705	Hordeum vulgare	26.35	1.00e-28	121.00
IUUC-Itr-047977	Ictidomys tridecemlineatus	66.54	0.00e+00	717.00
IUUC-Lpe-051605	Leersia perrieri	27.94	3.00e-22	100.00
IUUC-Loc-052241	Lepisosteus oculatus	70.08	0.00e+00	731.00
IUUC-Laf-054559	Loxodonta africana	64.81	2.00e-179	622.00
IUUC-Mcc-055093	Macaca mulatta	64.73	0.00e+00	697.00
IUUC-Meu-056417	Macropus eugenii	62.43	0.00e+00	627.00
IUUC-Mtr-058533	Medicago truncatula	27.08	2.00e-34	140.00
IUUC-Mga-059498	Meleagris gallopavo	67.67	0.00e+00	719.00
IUUC-Mmr-061782	Microcebus murinus	65.56	0.00e+00	697.00
IUUC-Mdo-062053	Monodelphis domestica	68.85	0.00e+00	722.00
IUUC-Mmu-063352	Mus musculus	63.60	0.00e+00	672.00
IUUC-Mac-064582	Musa acuminata	28.61	2.00e-28	120.00
IUUC-Mpu-066087	Mustela putorius furo	67.00	0.00e+00	712.00
IUUC-Mlu-068147	Myotis lucifugus	63.20	0.00e+00	669.00
IUUC-Nle-069503	Nomascus leucogenys	61.05	0.00e+00	644.00
IUUC-Opr-070479	Ochotona princeps	58.60	1.00e-178	619.00
IUUC-Ont-071700	Oreochromis niloticus	64.19	0.00e+00	652.00
IUUC-Oan-073702	Ornithorhynchus anatinus	73.95	0.00e+00	767.00
IUUC-Ocu-074886	Oryctolagus cuniculus	65.61	0.00e+00	700.00
IUUC-Oba-075729	Oryza barthii	25.52	9.00e-26	111.00
IUUC-Obr-076562	Oryza brachyantha	26.34	9.00e-27	114.00
IUUC-Ogl-077651	Oryza glaberrima	27.64	2.00e-26	113.00
IUUC-Ogu-078921	Oryza glumaepatula	26.09	7.00e-28	118.00
IUUC-Oin-079250	Oryza indica	27.44	1.00e-26	114.00
IUUC-Olo-080758	Oryza longistaminata	26.06	2.00e-25	110.00
IUUC-Ome-081707	Oryza meridionalis	27.86	2.00e-27	116.00
IUUC-Oni-083006	Oryza nivara	26.09	2.00e-27	117.00
IUUC-Opu-083650	Oryza punctata	25.82	4.00e-28	119.00
IUUC-Oru-084924	Oryza rufipogon	26.28	3.00e-28	119.00
IUUC-Osa-085820	Oryza sativa	26.09	1.00e-27	117.00
IUUC-Ola-087229	Oryzias latipes	61.94	5.00e-151	526.00
IUUC-Oga-088243	Otolemur garnettii	58.33	0.00e+00	690.00
IUUC-Oar-089461	Ovis aries	61.99	0.00e+00	710.00
IUUC-Ptr-090527	Pan troglodytes	64.92	0.00e+00	692.00
IUUC-Pan-092431	Papio anubis	63.33	3.00e-177	615.00
IUUC-Psi-093156	Pelodiscus sinensis	73.55	0.00e+00	808.00
IUUC-Ppa-095305	Physcomitrella patens	39.31	3.00e-23	104.00
IUUC-Pfo-097065	Poecilia formosa	62.75	0.00e+00	631.00
IUUC-Pab-098272	Pongo abelii	65.12	0.00e+00	699.00
IUUC-Pop-099827	Populus trichocarpa	25.87	1.00e-34	141.00
IUUC-Pca-100713	Procavia capensis	58.17	8.00e-178	617.00
IUUC-Ppe-102103	Prunus persica	27.67	4.00e-36	145.00
IUUC-Pva-103133	Pteropus vampyrus	63.64	2.00e-160	559.00
IUUC-Sha-107628	Sarcophilus harrisii	67.32	0.00e+00	721.00
IUUC-Sit-109891	Setaria italica	25.38	2.00e-32	134.00
IUUC-Sly-111779	Solanum lycopersicum	27.30	4.00e-34	139.00
IUUC-Stu-112817	Solanum tuberosum	43.20	2.00e-20	92.40
IUUC-Sar-113124	Sorex araneus	58.63	4.00e-125	442.00
IUUC-Sbi-114107	Sorghum bicolor	25.72	2.00e-29	123.00
IUUC-Ssc-115850	Sus scrofa	66.80	0.00e+00	698.00
IUUC-Tgu-117295	Taeniopygia guttata	71.94	0.00e+00	750.00
IUUC-Tru-117539	Takifugu rubripes	62.72	0.00e+00	631.00
IUUC-Tsy-118805	Tarsius syrichta	51.34	1.00e-76	281.00
IUUC-Tni-120274	Tetraodon nigroviridis	63.86	0.00e+00	636.00
IUUC-Tca-121162	Theobroma cacao	28.19	7.00e-29	122.00
IUUC-Tae-124822	Triticum aestivum	27.15	1.00e-30	127.00
IUUC-Tur-126162	Triticum urartu	27.15	8.00e-21	95.50
IUUC-Tbe-127884	Tupaia belangeri	76.23	7.00e-54	205.00
IUUC-Ttr-128665	Tursiops truncatus	61.90	8.00e-97	347.00
IUUC-Vpa-130385	Vicugna pacos	66.67	0.00e+00	714.00
IUUC-Vvi-131464	Vitis vinifera	26.57	3.00e-27	116.00
IUUC-Xtr-132015	Xenopus tropicalis	64.94	0.00e+00	781.00
IUUC-Xma-133109	Xiphophorus maculatus	64.55	0.00e+00	631.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence