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Tag Content
iUUCD ID IUUC-Bdi-014153
Ensembl Protein ID BRADI4G29560.1
UniProt Accession I1IPW3; I1IPW3_BRADI
Genbank Protein ID KQJ90120.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000883
Gene Name LOC100823715; BRADI_4g29560
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BRADI4G29560 BRADI4G29560.1 BRADI4G29560.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 4.00e-09 37.1 140 188
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++wfHp C+++++e++++ + +++C++C +
   Q: 140  YC-KCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEQTKKLD-YFMCSDCAK 188
           78.7*****************************88877777.6******86 PP
   
Organism Brachypodium distachyon
Protein Sequence
(Fasta)
MAKTKQGKRD VDSYTIKGTT KVVRVGDCVL MRSSDKDNPP YVARVESLES DGRGSLRVRV 60
RWYYRPEESK GGRRQFHGAK ELFLSDHFDT QSAHTIEGQC IVHPFKTYTK LDNVGPEDFF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Bdi-014153|E3,PHD|Brachypodium distachyon
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCCAAGA CCAAGCAGGG CAAGAGGGAC GTCGACTCCT ACACCATCAA GGGCACCACT 60
AAGGTCGTCC GAGGTACGTA CGCTTGTTTC CGGCGAATAG ATGCTGCTGC GTCGCCATTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Bdi-014153|E3,PHD|Brachypodium distachyon
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF01426--BAH
PF00628--PHD
SMART

SM00439--BAH
SM00249--PHD
Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly
KEGG bdi:100823715
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002427 Ailuropoda melanoleuca 36.36 2.00e-10 60.80
IUUC-Atr-002986 Amborella trichopoda 79.17 4.00e-101 359.00
IUUC-Aca-005043 Anolis carolinensis 41.82 2.00e-11 64.30
IUUC-Aly-005717 Arabidopsis lyrata 74.61 3.00e-91 327.00
IUUC-Ath-007631 Arabidopsis thaliana 74.61 1.00e-91 327.00
IUUC-Ate-010345 Aspergillus terreus 37.21 7.00e-04 39.70
IUUC-Ame-011579 Astyanax mexicanus 42.00 3.00e-10 60.50
IUUC-Bgr-012210 Blumeria graminis 44.44 7.00e-07 47.80
IUUC-Bol-016238 Brassica oleracea 72.09 3.00e-93 333.00
IUUC-Bra-017570 Brassica rapa 71.63 9.00e-93 332.00
IUUC-Cja-018757 Callithrix jacchus 39.62 1.00e-09 57.80
IUUC-Cfa-021156 Canis familiaris 36.36 2.00e-10 61.20
IUUC-Cpo-022284 Cavia porcellus 40.00 1.00e-10 61.60
IUUC-Csa-023515 Chlorocebus sabaeus 40.00 2.00e-10 60.80
IUUC-Cne-026894 Cryptococcus neoformans 40.85 5.00e-10 58.50
IUUC-Dre-028285 Danio rerio 42.00 1.00e-10 61.60
IUUC-Dno-029446 Dasypus novemcinctus 40.00 1.00e-10 60.80
IUUC-Ete-032380 Echinops telfairi 40.00 2.00e-10 60.80
IUUC-Eca-034302 Equus caballus 40.00 2.00e-10 60.80
IUUC-Fca-035578 Felis catus 40.00 2.00e-10 60.80
IUUC-Fal-037017 Ficedula albicollis 43.64 7.00e-12 65.90
IUUC-Gmo-038789 Gadus morhua 38.18 2.00e-10 60.50
IUUC-Gga-040290 Gallus gallus 43.64 6.00e-12 65.90
IUUC-Gac-041666 Gasterosteus aculeatus 36.36 6.00e-10 59.30
IUUC-Gma-044320 Glycine max 74.54 6.00e-99 352.00
IUUC-Ggo-044712 Gorilla gorilla 40.00 2.00e-10 60.80
IUUC-Hsa-046760 Homo sapiens 43.64 6.00e-12 65.90
IUUC-Lch-049793 Latimeria chalumnae 40.00 1.00e-10 61.60
IUUC-Lpe-051400 Leersia perrieri 88.43 2.00e-105 374.00
IUUC-Loc-051927 Lepisosteus oculatus 40.00 1.00e-10 61.60
IUUC-Laf-053656 Loxodonta africana 40.00 2.00e-10 60.80
IUUC-Mcc-055658 Macaca mulatta 40.00 2.00e-10 60.80
IUUC-Mtr-057710 Medicago truncatula 76.39 3.00e-93 333.00
IUUC-Mmr-061132 Microcebus murinus 43.64 7.00e-12 65.90
IUUC-Mdo-062097 Monodelphis domestica 39.62 9.00e-10 58.90
IUUC-Mmu-063458 Mus musculus 43.64 6.00e-12 66.20
IUUC-Mac-064749 Musa acuminata 78.24 4.00e-95 339.00
IUUC-Mpu-066429 Mustela putorius furo 40.00 2.00e-10 60.80
IUUC-Mlu-067746 Myotis lucifugus 40.00 2.00e-10 60.50
IUUC-Nle-070143 Nomascus leucogenys 40.00 2.00e-10 60.80
IUUC-Oan-073654 Ornithorhynchus anatinus 40.00 3.00e-10 60.50
IUUC-Ocu-074417 Oryctolagus cuniculus 40.00 2.00e-10 60.80
IUUC-Oba-075188 Oryza barthii 86.80 8.00e-104 368.00
IUUC-Obr-076844 Oryza brachyantha 82.41 1.00e-106 378.00
IUUC-Ogl-077260 Oryza glaberrima 81.48 1.00e-105 374.00
IUUC-Ogu-078663 Oryza glumaepatula 87.96 2.00e-109 387.00
IUUC-Oin-079894 Oryza indica 87.50 3.00e-109 386.00
IUUC-Olo-080411 Oryza longistaminata 89.18 1.00e-106 377.00
IUUC-Ome-081623 Oryza meridionalis 87.50 1.00e-108 384.00
IUUC-Oni-082587 Oryza nivara 87.50 3.00e-109 386.00
IUUC-Opu-083591 Oryza punctata 88.89 2.00e-111 393.00
IUUC-Oru-084597 Oryza rufipogon 87.04 1.00e-108 384.00
IUUC-Osa-086057 Oryza sativa 87.50 3.00e-109 386.00
IUUC-Ola-087236 Oryzias latipes 42.00 2.00e-10 60.80
IUUC-Olu-087802 Ostreococcus lucimarinus 44.85 1.00e-42 164.00
IUUC-Oga-088662 Otolemur garnettii 40.00 2.00e-10 60.50
IUUC-Oar-090332 Ovis aries 40.00 2.00e-10 60.80
IUUC-Ptr-091328 Pan troglodytes 43.64 7.00e-12 65.90
IUUC-Pan-092122 Papio anubis 40.00 2.00e-10 60.80
IUUC-Pma-094621 Petromyzon marinus 39.62 4.00e-10 58.50
IUUC-Ppa-095645 Physcomitrella patens 67.12 4.00e-80 289.00
IUUC-Pfo-096227 Poecilia formosa 42.00 2.00e-10 60.80
IUUC-Pab-097635 Pongo abelii 40.00 2.00e-10 60.80
IUUC-Pop-098948 Populus trichocarpa 72.69 2.00e-95 340.00
IUUC-Ppe-101758 Prunus persica 77.78 2.00e-99 353.00
IUUC-Pva-102839 Pteropus vampyrus 40.00 2.00e-10 60.80
IUUC-Rno-105402 Rattus norvegicus 46.00 4.00e-11 62.80
IUUC-Smo-109649 Selaginella moellendorffii 64.09 3.00e-83 300.00
IUUC-Sit-110411 Setaria italica 82.87 3.00e-107 380.00
IUUC-Sly-111450 Solanum lycopersicum 76.85 9.00e-99 351.00
IUUC-Stu-112123 Solanum tuberosum 81.54 7.00e-99 352.00
IUUC-Sbi-114186 Sorghum bicolor 81.48 5.00e-106 375.00
IUUC-Ssc-115645 Sus scrofa 40.00 2.00e-10 60.80
IUUC-Tgu-117091 Taeniopygia guttata 43.64 6.00e-12 66.20
IUUC-Tru-118118 Takifugu rubripes 41.82 2.00e-11 63.90
IUUC-Tsy-119214 Tarsius syrichta 40.00 2.00e-10 60.80
IUUC-Tni-120632 Tetraodon nigroviridis 41.82 3.00e-11 63.90
IUUC-Tca-121518 Theobroma cacao 78.70 9.00e-101 358.00
IUUC-Tae-122704 Triticum aestivum 90.74 7.00e-108 381.00
IUUC-Tur-126461 Triticum urartu 76.39 2.00e-86 310.00
IUUC-Ttr-128194 Tursiops truncatus 43.64 6.00e-12 66.20
IUUC-Vpa-130595 Vicugna pacos 40.00 2.00e-10 60.80
IUUC-Vvi-131614 Vitis vinifera 77.78 2.00e-100 357.00
IUUC-Xtr-132307 Xenopus tropicalis 40.00 1.00e-10 61.60
IUUC-Xma-134037 Xiphophorus maculatus 42.00 2.00e-10 60.50
Created Date 25-Jun-2017

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