iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	2.10e-14	53.6	364	416

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 6    vqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFvekl 62
            ++lydy+aqn+deL + +Gd++ vi   e + gW+    e +g+rG++P  + ekl
   Q: 364  YRALYDYTAQNSDELDISAGDILAVI--LEGEDGWWTV--ERNGQRGFVPGSYLEKL 416
           689***********************..999*****77..9***********99986 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MTAQLQFRDA FWCRDFTAHT GYEVLLQRLL DGRKMCKDVE ELLRQRAQAE ERYGKELVQI 60
ARKAGGQTEM NSLRTSFDSL KQQTENVGSA HIQLALALRE ELRSLEEFRE RQKEQRKKYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGCACAAAT CTTCCTGTGC AGGCCTCAGG CTGCTTGCCT GCCTGGCCTG TGCACATCCT 60
GCCTCTCTCC CAGCCTCTGC CCGCCACCTG GGCTGCCTGC CCTGGGCCTC AGCCTGCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0728--SH3 domain

Interpro

IPR031160--F_BAR
IPR001060--FCH_dom
IPR030777--PSTPIP1_SH3
IPR001452--SH3_domain
IPR013315--Spectrin_alpha_SH3

PROSITE

PS51741--F_BAR
PS50002--SH3

Pfam

PF00611--FCH
PF14604--SH3_9

PRINTS

PR00452--SH3DOMAIN
PR01887--SPECTRNALPHA

SMART

SM00055--FCH
SM00326--SH3

Gene Ontology

GO:0016020--C:membrane
GO:0016477--P:cell migration
GO:0006897--P:endocytosis

KEGG

rno:300732

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001807	Ailuropoda melanoleuca	83.17	8.00e-179	619.00
IUUC-Apl-003258	Anas platyrhynchos	69.10	5.00e-157	546.00
IUUC-Aca-005344	Anolis carolinensis	64.95	7.00e-154	536.00
IUUC-Acl-008110	Aspergillus clavatus	28.96	6.00e-33	136.00
IUUC-Afl-008516	Aspergillus flavus	30.66	2.00e-35	144.00
IUUC-Afu-008763	Aspergillus fumigatus	28.96	1.00e-33	138.00
IUUC-Ani-009231	Aspergillus nidulans	29.29	7.00e-26	112.00
IUUC-Ang-009578	Aspergillus niger	30.31	1.00e-32	135.00
IUUC-Aor-010112	Aspergillus oryzae	30.66	8.00e-36	145.00
IUUC-Ate-010371	Aspergillus terreus	29.31	5.00e-31	130.00
IUUC-Ame-011672	Astyanax mexicanus	45.39	2.00e-28	117.00
IUUC-Bta-013548	Bos taurus	84.86	0.00e+00	645.00
IUUC-Bci-013913	Botrytis cinerea	30.31	4.00e-34	140.00
IUUC-Cja-019037	Callithrix jacchus	82.45	6.00e-178	616.00
IUUC-Cpo-022393	Cavia porcellus	70.14	5.00e-150	523.00
IUUC-Csa-023180	Chlorocebus sabaeus	86.30	0.00e+00	662.00
IUUC-Csv-026227	Ciona savignyi	33.14	2.00e-31	129.00
IUUC-Dre-028698	Danio rerio	55.71	2.00e-130	458.00
IUUC-Dno-028886	Dasypus novemcinctus	87.02	0.00e+00	686.00
IUUC-Eca-033950	Equus caballus	85.27	0.00e+00	672.00
IUUC-Fca-035870	Felis catus	85.68	0.00e+00	650.00
IUUC-Fal-037102	Ficedula albicollis	66.11	2.00e-151	528.00
IUUC-Ggr-039791	Gaeumannomyces graminis	28.62	2.00e-33	138.00
IUUC-Gga-040188	Gallus gallus	69.73	6.00e-161	560.00
IUUC-Gac-041413	Gasterosteus aculeatus	54.92	5.00e-109	387.00
IUUC-Ggo-044750	Gorilla gorilla	83.49	0.00e+00	654.00
IUUC-Hsa-046755	Homo sapiens	86.06	0.00e+00	664.00
IUUC-Itr-048941	Ictidomys tridecemlineatus	88.07	0.00e+00	691.00
IUUC-Lch-049979	Latimeria chalumnae	56.91	2.00e-101	361.00
IUUC-Loc-052618	Lepisosteus oculatus	56.05	7.00e-138	483.00
IUUC-Laf-054116	Loxodonta africana	83.91	1.00e-172	598.00
IUUC-Mcc-055757	Macaca mulatta	86.54	0.00e+00	667.00
IUUC-Mpo-057500	Magnaporthe poae	29.62	5.00e-34	140.00
IUUC-Mga-059524	Meleagris gallopavo	67.57	5.00e-155	540.00
IUUC-Mvi-060493	Microbotryum violaceum	23.46	7.00e-21	96.30
IUUC-Mmr-060735	Microcebus murinus	86.06	0.00e+00	672.00
IUUC-Mdo-062497	Monodelphis domestica	66.76	2.00e-126	445.00
IUUC-Mmu-063381	Mus musculus	93.99	0.00e+00	726.00
IUUC-Mpu-066686	Mustela putorius furo	84.62	0.00e+00	672.00
IUUC-Mlu-067462	Myotis lucifugus	82.41	0.00e+00	647.00
IUUC-Nfi-068483	Neosartorya fischeri	28.62	4.00e-33	137.00
IUUC-Ncr-068751	Neurospora crassa	29.97	8.00e-35	142.00
IUUC-Nle-069072	Nomascus leucogenys	84.13	0.00e+00	650.00
IUUC-Opr-070779	Ochotona princeps	76.27	2.00e-165	575.00
IUUC-Ont-071334	Oreochromis niloticus	54.81	2.00e-132	465.00
IUUC-Ocu-074857	Oryctolagus cuniculus	73.91	5.00e-45	172.00
IUUC-Ola-087254	Oryzias latipes	49.64	2.00e-121	429.00
IUUC-Oga-088229	Otolemur garnettii	84.56	0.00e+00	660.00
IUUC-Oar-089195	Ovis aries	81.03	2.00e-177	614.00
IUUC-Pan-091699	Papio anubis	86.78	0.00e+00	667.00
IUUC-Psi-093831	Pelodiscus sinensis	69.78	1.00e-166	579.00
IUUC-Pno-094940	Phaeosphaeria nodorum	29.86	1.00e-32	135.00
IUUC-Pfo-097360	Poecilia formosa	55.42	1.00e-112	399.00
IUUC-Pab-098656	Pongo abelii	79.81	5.00e-170	590.00
IUUC-Pca-100873	Procavia capensis	72.71	3.00e-147	514.00
IUUC-Pva-103137	Pteropus vampyrus	79.42	3.00e-175	607.00
IUUC-Pte-104127	Pyrenophora teres	28.87	4.00e-26	114.00
IUUC-Pyt-104705	Pyrenophora triticirepentis	28.87	5.00e-30	127.00
IUUC-Sja-107895	Schizosaccharomyces japonicus	22.79	2.00e-22	101.00
IUUC-Spo-108022	Schizosaccharomyces pombe	24.74	1.00e-26	115.00
IUUC-Sre-115063	Sporisorium reilianum	26.30	4.00e-29	123.00
IUUC-Ssc-116422	Sus scrofa	84.86	0.00e+00	672.00
IUUC-Tgu-116919	Taeniopygia guttata	67.63	1.00e-155	542.00
IUUC-Tru-118376	Takifugu rubripes	55.93	1.00e-131	462.00
IUUC-Tni-120177	Tetraodon nigroviridis	56.28	8.00e-126	443.00
IUUC-Tre-121912	Trichoderma reesei	50.00	2.00e-07	52.00
IUUC-Tme-126946	Tuber melanosporum	26.86	7.00e-31	129.00
IUUC-Ttr-128642	Tursiops truncatus	85.23	0.00e+00	644.00
IUUC-Uma-129545	Ustilago maydis	26.44	4.00e-30	127.00
IUUC-Vda-129797	Verticillium dahliae	29.62	2.00e-31	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence