iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023169

Ensembl Protein ID

ENSCSAP00000002846.1

UniProt Accession

A0A0D9R2K7; A0A0D9R2K7_CHLSB

Genbank Protein ID

ENSCSAP00000002846

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01118561

Gene Name

TNRC6A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000006561.1	ENSCSAT00000004599.1	ENSCSAP00000002846.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	34.70	5.00e-34	144.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MRELEAKATK DVERNLSRDL VQEEEQLMEE KKKKKDDKKK KEAAQKKATE QKIKVPEQIK 60
PSVSQPQPAN SNNGTSTATS TNNNAKRATA NNQQPQQQPQ QPQQQQQQQP QPQQPQQQQP 120

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Nucleotide Sequence
(Fasta)

TCGGTGTAGA AAATGGCGCT GGTGCAGCGG CTCGGGCCTC TCCCCGCGGC GCTGCGGAGG 60
GCTTGAGGCT CGCGAGCCTC CTTCGCCGCG CCCCACTTGC TCGTGCACTT TACACACATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033501--TNRC6A

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF16608--TNRC6-PABC_bdg

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0035068--C:micro-ribonucleoprotein complex
GO:0005654--C:nucleoplasm
GO:0000932--C:P-body
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0035278--P:miRNA mediated inhibition of translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	96.55	0.00e+00	3001.00
IUUC-Apl-003191	Anas platyrhynchos	45.22	0.00e+00	747.00
IUUC-Aca-004717	Anolis carolinensis	43.99	0.00e+00	713.00
IUUC-Ame-010681	Astyanax mexicanus	42.12	8.00e-73	269.00
IUUC-Bta-012915	Bos taurus	92.10	0.00e+00	2814.00
IUUC-Cja-019614	Callithrix jacchus	40.62	0.00e+00	632.00
IUUC-Cfa-020452	Canis familiaris	92.92	0.00e+00	2907.00
IUUC-Cpo-021452	Cavia porcellus	42.61	0.00e+00	681.00
IUUC-Cho-024655	Choloepus hoffmanni	91.63	0.00e+00	2206.00
IUUC-Dre-028059	Danio rerio	49.06	4.00e-83	303.00
IUUC-Dno-029734	Dasypus novemcinctus	93.83	0.00e+00	2923.00
IUUC-Dor-030671	Dipodomys ordii	96.94	0.00e+00	2011.00
IUUC-Dme-032014	Drosophila melanogaster	34.70	6.00e-30	127.00
IUUC-Ete-032774	Echinops telfairi	47.77	4.00e-87	317.00
IUUC-Eca-033866	Equus caballus	43.37	0.00e+00	645.00
IUUC-Eeu-034572	Erinaceus europaeus	48.80	2.00e-43	171.00
IUUC-Fal-036856	Ficedula albicollis	41.26	0.00e+00	688.00
IUUC-Gga-040531	Gallus gallus	43.63	0.00e+00	679.00
IUUC-Gac-041681	Gasterosteus aculeatus	44.58	3.00e-77	284.00
IUUC-Ggo-045143	Gorilla gorilla	42.48	0.00e+00	658.00
IUUC-Hsa-045913	Homo sapiens	42.59	0.00e+00	650.00
IUUC-Lch-049619	Latimeria chalumnae	68.89	0.00e+00	2115.00
IUUC-Loc-052289	Lepisosteus oculatus	50.63	1.00e-89	325.00
IUUC-Laf-053607	Loxodonta africana	41.56	0.00e+00	646.00
IUUC-Mcc-055342	Macaca mulatta	41.89	7.00e-177	615.00
IUUC-Meu-056275	Macropus eugenii	89.26	0.00e+00	1384.00
IUUC-Mga-059241	Meleagris gallopavo	81.08	0.00e+00	2516.00
IUUC-Mmr-061348	Microcebus murinus	95.41	0.00e+00	2975.00
IUUC-Mdo-062155	Monodelphis domestica	42.18	1.00e-117	419.00
IUUC-Mmu-064259	Mus musculus	95.07	0.00e+00	2208.00
IUUC-Mpu-066534	Mustela putorius furo	81.21	0.00e+00	2379.00
IUUC-Mlu-067834	Myotis lucifugus	92.60	0.00e+00	2920.00
IUUC-Nle-069168	Nomascus leucogenys	98.69	0.00e+00	3033.00
IUUC-Opr-070976	Ochotona princeps	36.01	1.00e-93	338.00
IUUC-Ocu-073749	Oryctolagus cuniculus	93.13	0.00e+00	2865.00
IUUC-Oga-088116	Otolemur garnettii	96.75	0.00e+00	3016.00
IUUC-Oar-090041	Ovis aries	92.64	0.00e+00	2685.00
IUUC-Ptr-091135	Pan troglodytes	43.11	0.00e+00	637.00
IUUC-Pan-092665	Papio anubis	41.05	0.00e+00	630.00
IUUC-Psi-093057	Pelodiscus sinensis	43.65	0.00e+00	692.00
IUUC-Pma-094508	Petromyzon marinus	40.77	4.00e-44	173.00
IUUC-Pfo-097115	Poecilia formosa	37.47	3.00e-33	137.00
IUUC-Pab-097935	Pongo abelii	98.91	0.00e+00	3026.00
IUUC-Pca-100481	Procavia capensis	47.35	1.00e-81	299.00
IUUC-Pva-102376	Pteropus vampyrus	42.11	1.00e-65	245.00
IUUC-Rno-105508	Rattus norvegicus	92.05	0.00e+00	2828.00
IUUC-Sar-113036	Sorex araneus	46.33	1.00e-42	169.00
IUUC-Ssc-115574	Sus scrofa	47.46	2.00e-66	248.00
IUUC-Tgu-117233	Taeniopygia guttata	40.00	0.00e+00	691.00
IUUC-Tru-117725	Takifugu rubripes	45.95	4.00e-85	310.00
IUUC-Tsy-118786	Tarsius syrichta	35.88	1.00e-85	311.00
IUUC-Tbe-127551	Tupaia belangeri	94.41	0.00e+00	2828.00
IUUC-Ttr-128518	Tursiops truncatus	42.92	0.00e+00	668.00
IUUC-Vpa-130230	Vicugna pacos	85.49	0.00e+00	1168.00
IUUC-Xtr-132265	Xenopus tropicalis	37.05	2.00e-93	338.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence