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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Mmu-064259
Ensembl Protein ID ENSMUSP00000146266.1
UniProt Accession A0A0U1RQ65; A0A0U1RQ65_MOUSE
Genbank Protein ID ENSMUSP00000146266
Protein Name Trinucleotide repeat-containing gene 6A protein
Genbank Nucleotide ID AC138364
Gene Name Tnrc6a
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000052707.8 ENSMUST00000205514.1 ENSMUSP00000145912.1
ENSMUSG00000052707.8 ENSMUST00000094053.6 ENSMUSP00000091595.5
ENSMUSG00000052707.8 ENSMUST00000206888.1 ENSMUSP00000145963.1
ENSMUSG00000052707.8 ENSMUST00000205760.1 ENSMUSP00000146266.1
ENSMUSG00000052707.8 ENSMUST00000206014.1 ENSMUSP00000146300.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemiRTarBasemicroRNATRANSFAC
RepTarRAID2
Protein-protein Interaction
HINT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
UBD/Alpha-Helix/UBA 35.36 2.00e-34 145.00 IUUC-Dme-032014
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Mus musculus
Protein Sequence
(Fasta)
XQVNTNKGGG VWEPGTVNSQ SSPWGSGNGA NSGGSRRGWG SPAQNTGTGL SSVEWNKLPS 60
NQHSNDSANG NGKKLTNGWK STEEDDQGSA TSQTNEQNSV WAKAGGTVES DGSAESTGRL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-064259|UBD,UBA|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAAACTTGTG TCGCAGTAAA GAAGGAGGAG GGGATGGTCC GAGGCAAGCC CGAGCCAGCC 60
TCGGCGAAAA AGGCCGCGCT CCGCTCTTGC CAGGCCCCAG AGCCGCTCGT GGGGAACCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-064259|UBD,UBA|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR019486--Argonaute_hook_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033501--TNRC6A
Pfam

PF10427--Ago_hook
PF16608--TNRC6-PABC_bdg
Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001985 Ailuropoda melanoleuca 95.21 0.00e+00 2203.00
IUUC-Apl-003191 Anas platyrhynchos 45.77 0.00e+00 738.00
IUUC-Aca-004717 Anolis carolinensis 44.76 0.00e+00 707.00
IUUC-Ame-010681 Astyanax mexicanus 42.32 2.00e-71 265.00
IUUC-Bta-012915 Bos taurus 90.04 0.00e+00 2016.00
IUUC-Cja-019614 Callithrix jacchus 42.45 5.00e-176 612.00
IUUC-Cfa-020452 Canis familiaris 91.42 0.00e+00 2120.00
IUUC-Cpo-021452 Cavia porcellus 43.95 0.00e+00 669.00
IUUC-Csa-023169 Chlorocebus sabaeus 95.28 0.00e+00 2164.00
IUUC-Cho-024655 Choloepus hoffmanni 88.99 0.00e+00 2039.00
IUUC-Dre-028059 Danio rerio 43.01 1.00e-138 488.00
IUUC-Dno-029734 Dasypus novemcinctus 92.74 0.00e+00 2144.00
IUUC-Dor-030671 Dipodomys ordii 94.66 0.00e+00 1985.00
IUUC-Dme-032014 Drosophila melanogaster 35.36 1.00e-30 129.00
IUUC-Ete-032774 Echinops telfairi 47.77 3.00e-85 311.00
IUUC-Eca-033866 Equus caballus 43.30 0.00e+00 628.00
IUUC-Eeu-034572 Erinaceus europaeus 48.58 5.00e-42 167.00
IUUC-Fal-036856 Ficedula albicollis 43.83 0.00e+00 660.00
IUUC-Gga-040531 Gallus gallus 44.12 0.00e+00 668.00
IUUC-Gac-041681 Gasterosteus aculeatus 44.58 4.00e-76 281.00
IUUC-Ggo-045143 Gorilla gorilla 43.40 0.00e+00 646.00
IUUC-Hsa-045913 Homo sapiens 42.70 0.00e+00 640.00
IUUC-Lch-049619 Latimeria chalumnae 71.15 0.00e+00 1643.00
IUUC-Loc-052289 Lepisosteus oculatus 50.63 9.00e-88 319.00
IUUC-Laf-053607 Loxodonta africana 41.66 0.00e+00 640.00
IUUC-Mcc-055342 Macaca mulatta 42.54 2.00e-174 607.00
IUUC-Meu-056275 Macropus eugenii 88.15 0.00e+00 1368.00
IUUC-Mga-059241 Meleagris gallopavo 81.36 0.00e+00 1936.00
IUUC-Mmr-061348 Microcebus murinus 92.42 0.00e+00 2127.00
IUUC-Mdo-062155 Monodelphis domestica 44.00 3.00e-112 400.00
IUUC-Mpu-066534 Mustela putorius furo 82.45 0.00e+00 1811.00
IUUC-Mlu-067834 Myotis lucifugus 92.49 0.00e+00 2216.00
IUUC-Nle-069168 Nomascus leucogenys 94.50 0.00e+00 2156.00
IUUC-Opr-070976 Ochotona princeps 36.87 2.00e-96 348.00
IUUC-Ocu-073749 Oryctolagus cuniculus 93.79 0.00e+00 2150.00
IUUC-Oga-088116 Otolemur garnettii 95.07 0.00e+00 2209.00
IUUC-Oar-090041 Ovis aries 90.71 0.00e+00 2038.00
IUUC-Ptr-091135 Pan troglodytes 43.32 9.00e-180 625.00
IUUC-Pan-092665 Papio anubis 43.10 1.00e-175 611.00
IUUC-Psi-093057 Pelodiscus sinensis 44.41 0.00e+00 689.00
IUUC-Pma-094508 Petromyzon marinus 41.05 6.00e-44 172.00
IUUC-Pfo-097115 Poecilia formosa 37.37 1.00e-62 234.00
IUUC-Pab-097935 Pongo abelii 95.21 0.00e+00 2165.00
IUUC-Pca-100481 Procavia capensis 47.56 7.00e-80 293.00
IUUC-Pva-102376 Pteropus vampyrus 39.73 8.00e-98 352.00
IUUC-Rno-105508 Rattus norvegicus 94.71 0.00e+00 2196.00
IUUC-Sar-113036 Sorex araneus 52.48 6.00e-42 167.00
IUUC-Ssc-115574 Sus scrofa 47.46 3.00e-66 247.00
IUUC-Tgu-117233 Taeniopygia guttata 43.85 0.00e+00 655.00
IUUC-Tru-117725 Takifugu rubripes 39.64 2.00e-121 431.00
IUUC-Tsy-118786 Tarsius syrichta 37.32 1.00e-85 312.00
IUUC-Tbe-127551 Tupaia belangeri 92.07 0.00e+00 2024.00
IUUC-Ttr-128518 Tursiops truncatus 42.62 0.00e+00 651.00
IUUC-Vpa-130230 Vicugna pacos 83.61 0.00e+00 1155.00
IUUC-Xtr-132265 Xenopus tropicalis 38.71 5.00e-90 327.00
Created Date 25-Jun-2017

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