iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116192

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU019565

Gene Name

RNF138

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000003730.2	ENSSSCT00000004130.2	ENSSSCP00000004037.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.10e-07	30.4	18	58

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C++C+e +k+++++  C+Hvf+++C+  ++          ++CPlCr
   Q: 18   CPVCQEVLKTPVRTAACQHVFCRKCFlTAM------RESGIHCPLCR 58
           **********999999*********96666......999*******8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAEELSAATS YTEDDFYCPV CQEVLKTPVR TAACQHVFCR KCFLTAMRES GIHCPLCRGN 60
VTRRERACPE RALDLENIMR KFSGSCRCCA KQIKFYRMRH HYKSCKKYQD EYGVSSIIPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGTCGGGC CCCGGGCCGC CACCGCCACC TCGGCCGCTG CCGCCGCCAT CGCTTTCATC 60
CCCATCCCCC GCCATGGCCG AGGAGCTCTC TGCGGCCACG TCCTACACCG AAGATGATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008598--Di19_Zn_binding_dom
IPR034734--ZF_C2HC_RNF
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51803--ZF_C2HC_RNF
PS50089--ZF_RING_2

Pfam

PF05605--zf-Di19

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0035861--C:site of double-strand break
GO:0003697--F:single-stranded DNA binding
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0000724--P:double-strand break repair via homologous recombination
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

ssc:100515956

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001267	Ailuropoda melanoleuca	98.78	1.00e-145	507.00
IUUC-Apl-003941	Anas platyrhynchos	68.02	2.00e-91	327.00
IUUC-Aca-005233	Anolis carolinensis	67.90	3.00e-101	360.00
IUUC-Bta-012999	Bos taurus	98.37	2.00e-145	507.00
IUUC-Cja-019489	Callithrix jacchus	98.78	7.00e-146	508.00
IUUC-Cfa-020567	Canis familiaris	99.50	7.00e-117	412.00
IUUC-Cpo-022165	Cavia porcellus	98.37	4.00e-145	506.00
IUUC-Csa-024096	Chlorocebus sabaeus	99.18	3.00e-146	509.00
IUUC-Cho-024686	Choloepus hoffmanni	89.42	2.00e-106	377.00
IUUC-Cgl-026426	Colletotrichum gloeosporioides	39.71	5.00e-09	55.50
IUUC-Dno-029625	Dasypus novemcinctus	98.78	4.00e-145	506.00
IUUC-Dor-030983	Dipodomys ordii	84.08	2.00e-116	411.00
IUUC-Ete-032453	Echinops telfairi	73.47	3.00e-100	357.00
IUUC-Eca-034367	Equus caballus	99.04	3.00e-123	433.00
IUUC-Eeu-034722	Erinaceus europaeus	78.37	1.00e-89	321.00
IUUC-Fca-036590	Felis catus	100.00	4.00e-147	513.00
IUUC-Fal-037287	Ficedula albicollis	72.00	1.00e-106	378.00
IUUC-Fox-037926	Fusarium oxysporum	37.80	1.00e-09	56.20
IUUC-Gga-041055	Gallus gallus	70.71	1.00e-102	365.00
IUUC-Ggo-045324	Gorilla gorilla	98.78	1.00e-145	508.00
IUUC-Hsa-046364	Homo sapiens	98.78	1.00e-145	508.00
IUUC-Itr-048181	Ictidomys tridecemlineatus	98.78	2.00e-144	503.00
IUUC-Loc-052428	Lepisosteus oculatus	37.72	6.00e-45	173.00
IUUC-Laf-054506	Loxodonta africana	99.18	1.00e-146	511.00
IUUC-Mcc-054595	Macaca mulatta	99.52	1.00e-123	435.00
IUUC-Mpo-057316	Magnaporthe poae	44.64	4.00e-08	52.40
IUUC-Mga-060068	Meleagris gallopavo	70.95	7.00e-102	362.00
IUUC-Mmr-061516	Microcebus murinus	97.18	2.00e-142	497.00
IUUC-Mdo-062243	Monodelphis domestica	87.80	5.00e-130	456.00
IUUC-Mmu-063719	Mus musculus	95.10	8.00e-142	495.00
IUUC-Mpu-065869	Mustela putorius furo	100.00	4.00e-147	513.00
IUUC-Mlu-068157	Myotis lucifugus	98.08	2.00e-122	430.00
IUUC-Nle-069538	Nomascus leucogenys	83.67	9.00e-115	405.00
IUUC-Opr-070640	Ochotona princeps	95.92	2.00e-142	497.00
IUUC-Oan-072919	Ornithorhynchus anatinus	88.44	3.00e-97	347.00
IUUC-Ocu-074897	Oryctolagus cuniculus	98.78	1.00e-145	508.00
IUUC-Oga-088165	Otolemur garnettii	97.96	2.00e-145	507.00
IUUC-Oar-090364	Ovis aries	97.99	5.00e-117	412.00
IUUC-Ptr-090784	Pan troglodytes	98.78	1.00e-145	508.00
IUUC-Pan-091874	Papio anubis	99.18	3.00e-146	509.00
IUUC-Psi-093531	Pelodiscus sinensis	77.20	9.00e-106	375.00
IUUC-Pab-098013	Pongo abelii	98.78	1.00e-145	508.00
IUUC-Pca-100822	Procavia capensis	91.93	1.00e-120	425.00
IUUC-Pva-102936	Pteropus vampyrus	97.55	6.00e-145	505.00
IUUC-Rno-106110	Rattus norvegicus	58.12	2.00e-73	268.00
IUUC-Sha-107403	Sarcophilus harrisii	94.47	1.00e-113	401.00
IUUC-Sar-113678	Sorex araneus	97.59	7.00e-46	176.00
IUUC-Tgu-116820	Taeniopygia guttata	71.06	3.00e-98	350.00
IUUC-Tsy-119211	Tarsius syrichta	81.25	6.00e-95	339.00
IUUC-Tre-121992	Trichoderma reesei	40.00	2.00e-07	50.10
IUUC-Tbe-127480	Tupaia belangeri	61.22	9.00e-77	279.00
IUUC-Ttr-128859	Tursiops truncatus	98.78	2.00e-146	510.00
IUUC-Vda-129783	Verticillium dahliae	37.68	2.00e-09	57.00
IUUC-Vpa-130682	Vicugna pacos	94.29	1.00e-133	468.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence