iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000811

Ensembl Protein ID

EMT03646

UniProt Accession

R7W6R5; R7W6R5_AEGTA

Genbank Protein ID

EMT03646.1

Protein Name

RING-H2 finger protein ATL5B

Genbank Nucleotide ID

KD604313

Gene Name

F775_13925

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_13925	EMT03646	EMT03646

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	36.2	101	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+dfkdg   +vlp CgH fh  C+ +w         + +CP+Cr
   Q: 101  CAICLSDFKDGetIRVLPvCGHRFHVPCVDRW------LTSRCSCPTCR 143
           ********87777999999*************......9*********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MSNCMDVSAT PSPEPPPPTA ALDYDVVVIL AAMLCALVCA LGLNSVLQQC VARCTRRAVA 60
DPVGWVAHRR ANGGLKREAL VALPVATYAG EKQHASAGAG CAICLSDFKD GETIRVLPVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCAACT GCATGGACGT CTCGGCCACG CCGTCCCCGG AGCCGCCCCC GCCGACAGCG 60
GCGCTGGACT ACGACGTCGT GGTGATCCTG GCGGCGATGT TGTGTGCTCT GGTGTGCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_13925

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002631	Amborella trichopoda	50.37	9.00e-34	135.00
IUUC-Aly-005951	Arabidopsis lyrata	47.11	3.00e-24	103.00
IUUC-Bta-012763	Bos taurus	39.44	6.00e-14	72.00
IUUC-Bdi-014385	Brachypodium distachyon	60.00	2.00e-34	137.00
IUUC-Bol-015320	Brassica oleracea	41.51	1.00e-21	95.50
IUUC-Bra-017535	Brassica rapa	36.89	6.00e-26	109.00
IUUC-Cja-018980	Callithrix jacchus	39.44	2.00e-13	70.50
IUUC-Cfa-020416	Canis familiaris	39.44	1.00e-13	71.20
IUUC-Cpo-022086	Cavia porcellus	38.67	8.00e-14	71.60
IUUC-Csa-023246	Chlorocebus sabaeus	39.44	1.00e-13	70.90
IUUC-Dor-030800	Dipodomys ordii	39.44	9.00e-14	71.20
IUUC-Eca-033892	Equus caballus	39.02	5.00e-14	72.40
IUUC-Eeu-034563	Erinaceus europaeus	39.44	1.00e-13	71.20
IUUC-Fca-035765	Felis catus	39.44	2.00e-13	70.50
IUUC-Gmo-039344	Gadus morhua	38.03	2.00e-13	70.50
IUUC-Gma-044104	Glycine max	50.81	8.00e-35	138.00
IUUC-Ggo-044902	Gorilla gorilla	39.44	1.00e-13	70.90
IUUC-Hsa-046548	Homo sapiens	39.44	1.00e-13	70.90
IUUC-Hvu-047379	Hordeum vulgare	88.44	4.00e-61	226.00
IUUC-Itr-048447	Ictidomys tridecemlineatus	39.44	1.00e-13	70.90
IUUC-Lpe-051348	Leersia perrieri	47.57	4.00e-23	100.00
IUUC-Laf-054409	Loxodonta africana	34.83	1.00e-13	71.20
IUUC-Mcc-054858	Macaca mulatta	39.44	1.00e-13	70.90
IUUC-Mmr-060699	Microcebus murinus	39.44	6.00e-14	72.00
IUUC-Mpu-065891	Mustela putorius furo	39.44	1.00e-13	70.90
IUUC-Mlu-067177	Myotis lucifugus	40.00	8.00e-14	71.60
IUUC-Nle-069127	Nomascus leucogenys	39.44	1.00e-13	70.90
IUUC-Oba-075544	Oryza barthii	73.83	4.00e-44	169.00
IUUC-Ogl-077537	Oryza glaberrima	73.83	4.00e-44	169.00
IUUC-Ogu-078956	Oryza glumaepatula	73.83	5.00e-44	169.00
IUUC-Oin-079590	Oryza indica	73.83	8.00e-44	168.00
IUUC-Olo-080939	Oryza longistaminata	47.57	2.00e-23	101.00
IUUC-Ome-081507	Oryza meridionalis	72.00	4.00e-42	163.00
IUUC-Oni-082676	Oryza nivara	73.83	4.00e-44	169.00
IUUC-Opu-083545	Oryza punctata	71.14	5.00e-35	139.00
IUUC-Oru-084832	Oryza rufipogon	73.83	8.00e-44	168.00
IUUC-Osa-086155	Oryza sativa	73.83	8.00e-44	168.00
IUUC-Oga-088750	Otolemur garnettii	39.44	5.00e-14	72.40
IUUC-Ptr-091533	Pan troglodytes	39.44	1.00e-13	70.90
IUUC-Pan-092675	Papio anubis	39.44	1.00e-13	71.20
IUUC-Pab-098486	Pongo abelii	39.44	1.00e-13	70.90
IUUC-Pop-098859	Populus trichocarpa	60.00	3.00e-44	169.00
IUUC-Ppe-101304	Prunus persica	56.59	2.00e-37	147.00
IUUC-Sit-110398	Setaria italica	50.49	2.00e-24	104.00
IUUC-Stu-112500	Solanum tuberosum	50.86	3.00e-29	120.00
IUUC-Sar-113229	Sorex araneus	39.44	8.00e-14	71.60
IUUC-Sbi-114355	Sorghum bicolor	77.40	8.00e-46	175.00
IUUC-Tsy-119338	Tarsius syrichta	39.44	9.00e-14	71.20
IUUC-Tca-121005	Theobroma cacao	57.14	7.00e-33	132.00
IUUC-Tae-123936	Triticum aestivum	100.00	2.00e-63	233.00
IUUC-Vpa-130480	Vicugna pacos	39.44	1.00e-13	70.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence