iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	miRNAMap	RAID2
Protein-protein Interaction
IID	PINA	HINT
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	3.80e-39	132.8	680	733

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 7    qvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFvekl 62
           +++y+y +qn+deL+l++Gd v+v+  ++ d gW +gv+  ++k G fP n+v+ +
   Q: 680  RAMYQYRPQNEDELELREGDRVDVM--QQCDDGWFVGVSRRTQKFGTFPGNYVAPV 733
           699*********************9..88999*********************875 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MARIPGVGRS STSSLDNKED SESDVALLSP KDPDRVHTKE QLAHPVSSNL DPSMQGLPAG 60
LSLDDFIPGH LRAHIGASSR GTRVPVIRNG GSNTLNFQFH DPAPRTVCNG CPPPRRDGSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAATTTCAT GCCAAGTCTA GGTGGTTTCA GCTCAAGCAG CAAGGACGTG AACATGGAGC 60
ATCCCTCTGT GCAGCTCTGA AGTAGAGCCA AGCACTCTGC CTGCCTGTAA GTCCCTGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR001452--SH3_domain
IPR003127--SoHo_dom
IPR028510--Vinexin

PROSITE

PS50002--SH3
PS50831--SOHO

Pfam

PF00018--SH3_1
PF14604--SH3_9
PF02208--Sorb

PRINTS

PR00452--SH3DOMAIN

SMART

SM00326--SH3
SM00459--Sorb

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005925--C:focal adhesion
GO:0005634--C:nucleus
GO:0007015--P:actin filament organization
GO:0031589--P:cell-substrate adhesion
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0043410--P:positive regulation of MAPK cascade
GO:0051496--P:positive regulation of stress fiber assembly

KEGG

rno:282843

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001334	Ailuropoda melanoleuca	78.46	0.00e+00	1063.00
IUUC-Aca-004742	Anolis carolinensis	63.83	7.00e-93	333.00
IUUC-Ame-011484	Astyanax mexicanus	65.73	5.00e-55	208.00
IUUC-Bta-013006	Bos taurus	75.57	0.00e+00	989.00
IUUC-Cja-018889	Callithrix jacchus	78.84	0.00e+00	1004.00
IUUC-Cfa-020116	Canis familiaris	72.24	0.00e+00	978.00
IUUC-Cpo-022410	Cavia porcellus	74.73	0.00e+00	978.00
IUUC-Csa-023880	Chlorocebus sabaeus	78.30	0.00e+00	1047.00
IUUC-Dre-027897	Danio rerio	42.05	2.00e-67	250.00
IUUC-Dor-031099	Dipodomys ordii	76.52	0.00e+00	987.00
IUUC-Ete-033119	Echinops telfairi	74.37	4.00e-98	352.00
IUUC-Eca-033308	Equus caballus	77.52	0.00e+00	1059.00
IUUC-Eeu-034908	Erinaceus europaeus	67.36	5.00e-177	614.00
IUUC-Fca-035613	Felis catus	74.20	0.00e+00	983.00
IUUC-Fal-036732	Ficedula albicollis	57.91	1.00e-86	314.00
IUUC-Gmo-039474	Gadus morhua	67.39	5.00e-53	202.00
IUUC-Ggo-045404	Gorilla gorilla	78.73	0.00e+00	1100.00
IUUC-Hsa-046435	Homo sapiens	79.51	0.00e+00	980.00
IUUC-Itr-048874	Ictidomys tridecemlineatus	77.88	0.00e+00	1074.00
IUUC-Lch-049463	Latimeria chalumnae	57.49	5.00e-89	320.00
IUUC-Loc-052576	Lepisosteus oculatus	41.63	4.00e-72	265.00
IUUC-Laf-053952	Loxodonta africana	77.39	0.00e+00	1057.00
IUUC-Mcc-055482	Macaca mulatta	79.22	0.00e+00	1010.00
IUUC-Meu-056517	Macropus eugenii	56.67	4.00e-167	581.00
IUUC-Mvi-060304	Microbotryum violaceum	34.46	2.00e-19	90.90
IUUC-Mmr-061231	Microcebus murinus	77.91	0.00e+00	1021.00
IUUC-Mdo-061965	Monodelphis domestica	58.88	0.00e+00	662.00
IUUC-Mmu-063208	Mus musculus	93.32	0.00e+00	1315.00
IUUC-Mpu-066398	Mustela putorius furo	78.41	0.00e+00	1090.00
IUUC-Mlu-067369	Myotis lucifugus	67.74	0.00e+00	884.00
IUUC-Nle-069995	Nomascus leucogenys	79.07	0.00e+00	1004.00
IUUC-Opr-070845	Ochotona princeps	78.57	2.00e-87	316.00
IUUC-Ont-071643	Oreochromis niloticus	43.67	8.00e-80	291.00
IUUC-Oan-072838	Ornithorhynchus anatinus	69.25	7.00e-116	411.00
IUUC-Ocu-074532	Oryctolagus cuniculus	74.63	0.00e+00	987.00
IUUC-Ola-086962	Oryzias latipes	48.50	1.00e-54	207.00
IUUC-Oga-089133	Otolemur garnettii	76.58	0.00e+00	1059.00
IUUC-Oar-089690	Ovis aries	74.66	0.00e+00	1018.00
IUUC-Ptr-091678	Pan troglodytes	79.80	0.00e+00	1025.00
IUUC-Pan-091746	Papio anubis	78.76	0.00e+00	1078.00
IUUC-Pfo-096778	Poecilia formosa	50.00	2.00e-61	230.00
IUUC-Pab-098678	Pongo abelii	79.51	0.00e+00	1006.00
IUUC-Pca-100286	Procavia capensis	75.18	0.00e+00	971.00
IUUC-Pva-102673	Pteropus vampyrus	77.46	0.00e+00	746.00
IUUC-Sha-107072	Sarcophilus harrisii	57.99	0.00e+00	693.00
IUUC-Ssc-116138	Sus scrofa	76.99	0.00e+00	1063.00
IUUC-Tsy-118791	Tarsius syrichta	84.79	3.00e-143	501.00
IUUC-Tbe-127945	Tupaia belangeri	82.23	7.00e-105	374.00
IUUC-Ttr-128675	Tursiops truncatus	84.08	2.00e-143	502.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence