iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105901

Ensembl Protein ID

ENSRNOP00000005849.5

UniProt Accession

G3V6J7; G3V6J7_RAT

Genbank Protein ID

ENSRNOP00000005849

Protein Name

Zinc finger protein 238

Genbank Nucleotide ID

AABR07021853

Gene Name

Zfp238

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000004423.6	ENSRNOT00000005849.6	ENSRNOP00000005849.5

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	1.10e-12	48.6	24	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmeleesksklmveik.d.vqpevfrallkFlYtgklden 68
           +D+++ vg+ +f+ah++vLa++S +F+   + +l+++   + v+++ d v + +f  ll+F+Y gkl+ +
   Q: 24   CDCTVLVGDAQFRAHRAVLASCSMYFHLFYKDQLDKR---DIVHLNsDiVTAPAFALLLEFMYEGKLQFK 90
           8*************************98777777765...6*****99*******************865 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEFPDHSRHL LQCLSEQRHQ GFLCDCTVLV GDAQFRAHRA VLASCSMYFH LFYKDQLDKR 60
DIVHLNSDIV TAPAFALLLE FMYEGKLQFK DLPIEDVLAA ASYLHMYDIV KVCKKKLKEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTCC CAGACCACAG CAGACATTTG CTGCAGTGTC TGAGCGAGCA GAGGCACCAG 60
GGCTTTCTTT GTGACTGCAC TGTTCTGGTG GGAGATGCCC AGTTCCGGGC ACACCGAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR023413--GFP-like
IPR004039--Rubredoxin-type_fold
IPR011333--SKP1/BTB/POZ
IPR013087--Znf_C2H2_type

PROSITE

PS50097--BTB
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00651--BTB

SMART

SM00225--BTB
SM00355--ZnF_C2H2

Gene Ontology

GO:0045171--C:intercellular bridge
GO:0015630--C:microtubule cytoskeleton
GO:0005654--C:nucleoplasm
GO:0046872--F:metal ion binding
GO:0043565--F:sequence-specific DNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002255	Ailuropoda melanoleuca	92.91	0.00e+00	892.00
IUUC-Apl-004085	Anas platyrhynchos	97.13	0.00e+00	988.00
IUUC-Aca-005205	Anolis carolinensis	95.79	0.00e+00	983.00
IUUC-Ame-011717	Astyanax mexicanus	71.17	0.00e+00	698.00
IUUC-Bta-013254	Bos taurus	98.85	0.00e+00	1036.00
IUUC-Cja-019019	Callithrix jacchus	99.04	0.00e+00	1006.00
IUUC-Cfa-020089	Canis familiaris	94.46	0.00e+00	875.00
IUUC-Cpo-022313	Cavia porcellus	93.68	0.00e+00	956.00
IUUC-Csa-023163	Chlorocebus sabaeus	73.52	0.00e+00	641.00
IUUC-Dre-028629	Danio rerio	71.56	0.00e+00	688.00
IUUC-Dno-029978	Dasypus novemcinctus	93.88	0.00e+00	930.00
IUUC-Dor-031076	Dipodomys ordii	95.21	0.00e+00	926.00
IUUC-Eca-034186	Equus caballus	98.08	0.00e+00	1028.00
IUUC-Eeu-035053	Erinaceus europaeus	98.66	0.00e+00	1034.00
IUUC-Fca-036534	Felis catus	92.16	4.00e-115	407.00
IUUC-Fal-036841	Ficedula albicollis	96.55	0.00e+00	988.00
IUUC-Gmo-039206	Gadus morhua	83.94	4.00e-97	348.00
IUUC-Gga-040558	Gallus gallus	97.13	0.00e+00	986.00
IUUC-Gac-042192	Gasterosteus aculeatus	65.90	0.00e+00	635.00
IUUC-Ggo-045056	Gorilla gorilla	99.43	0.00e+00	1040.00
IUUC-Hsa-046837	Homo sapiens	99.23	0.00e+00	1039.00
IUUC-Itr-048183	Ictidomys tridecemlineatus	99.23	0.00e+00	1035.00
IUUC-Lch-050214	Latimeria chalumnae	85.71	0.00e+00	848.00
IUUC-Loc-051869	Lepisosteus oculatus	74.41	0.00e+00	684.00
IUUC-Laf-053454	Loxodonta africana	98.28	0.00e+00	1030.00
IUUC-Mcc-055511	Macaca mulatta	99.08	0.00e+00	855.00
IUUC-Meu-056846	Macropus eugenii	97.13	0.00e+00	1022.00
IUUC-Mga-059766	Meleagris gallopavo	95.02	0.00e+00	952.00
IUUC-Mmr-061689	Microcebus murinus	98.85	0.00e+00	1035.00
IUUC-Mdo-062846	Monodelphis domestica	97.13	0.00e+00	1022.00
IUUC-Mmu-063612	Mus musculus	99.43	0.00e+00	1040.00
IUUC-Mpu-066244	Mustela putorius furo	80.46	0.00e+00	813.00
IUUC-Mlu-067913	Myotis lucifugus	96.74	0.00e+00	993.00
IUUC-Nle-068967	Nomascus leucogenys	98.85	0.00e+00	1030.00
IUUC-Ont-072037	Oreochromis niloticus	59.72	5.00e-174	604.00
IUUC-Oan-072812	Ornithorhynchus anatinus	87.98	3.00e-138	484.00
IUUC-Ocu-073991	Oryctolagus cuniculus	99.04	0.00e+00	1033.00
IUUC-Ola-086871	Oryzias latipes	65.77	0.00e+00	626.00
IUUC-Oga-089062	Otolemur garnettii	98.85	0.00e+00	1036.00
IUUC-Oar-089345	Ovis aries	91.62	0.00e+00	870.00
IUUC-Ptr-091144	Pan troglodytes	99.43	0.00e+00	1040.00
IUUC-Pan-091848	Papio anubis	99.43	0.00e+00	1040.00
IUUC-Psi-093729	Pelodiscus sinensis	55.27	2.00e-125	442.00
IUUC-Pfo-097013	Poecilia formosa	62.54	0.00e+00	634.00
IUUC-Pab-097678	Pongo abelii	99.04	0.00e+00	1051.00
IUUC-Pva-102751	Pteropus vampyrus	98.28	0.00e+00	1030.00
IUUC-Sha-106850	Sarcophilus harrisii	97.13	0.00e+00	1022.00
IUUC-Sar-112964	Sorex araneus	98.66	0.00e+00	1034.00
IUUC-Ssc-115395	Sus scrofa	98.47	0.00e+00	1032.00
IUUC-Tgu-117216	Taeniopygia guttata	96.55	0.00e+00	986.00
IUUC-Tru-117749	Takifugu rubripes	54.70	1.00e-127	450.00
IUUC-Tsy-118841	Tarsius syrichta	97.89	0.00e+00	1027.00
IUUC-Tni-120035	Tetraodon nigroviridis	66.42	0.00e+00	639.00
IUUC-Ttr-128943	Tursiops truncatus	98.05	0.00e+00	629.00
IUUC-Xtr-131820	Xenopus tropicalis	87.36	0.00e+00	894.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence