iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-052915

Ensembl Protein ID

ENSLOCP00000022198.1

UniProt Accession

W5NNI9; W5NNI9_LEPOC

Genbank Protein ID

ENSLOCP00000022198

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01030020

Gene Name

TRIM56

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000018097.1	ENSLOCT00000022239.1	ENSLOCP00000022198.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	29.62	1.00e-66	252.00	IUUC-Hsa-046238
E3 activity/RING/RING	28.53	1.00e-66	251.00	IUUC-Mmu-064375

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

RAMAATNVEL SAQIEEEFLR CKICFEVYRT PRTLSCLHSF CEPCLKKLLD QRKGTVCCPE 60
CRTVTDLQGC VGNAKASFFI NSLLDLFRAK TDTQALCSLC PSLGKAPEPA SSRCLDCADF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCCATGG CAGCAACTAA CGTTGAGCTT TCTGCTCAAA TAGAGGAGGA GTTCCTGCGG 60
TGCAAGATCT GCTTTGAGGT GTACAGGACG CCCCGAACCC TGTCTTGCCT GCACTCCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR000315--Znf_B-box
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF00097--zf-C3HC4

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001496	Ailuropoda melanoleuca	39.69	7.00e-38	152.00
IUUC-Aca-004996	Anolis carolinensis	33.68	2.00e-49	190.00
IUUC-Bta-012368	Bos taurus	30.77	7.00e-60	225.00
IUUC-Cja-019698	Callithrix jacchus	40.62	1.00e-41	164.00
IUUC-Csa-023090	Chlorocebus sabaeus	29.80	4.00e-52	199.00
IUUC-Dno-030051	Dasypus novemcinctus	41.43	2.00e-45	177.00
IUUC-Ete-032312	Echinops telfairi	40.47	1.00e-32	132.00
IUUC-Eca-033253	Equus caballus	45.66	4.00e-36	144.00
IUUC-Eeu-034772	Erinaceus europaeus	42.62	3.00e-20	92.00
IUUC-Ggo-045486	Gorilla gorilla	40.62	2.00e-40	160.00
IUUC-Hsa-046238	Homo sapiens	40.31	8.00e-40	158.00
IUUC-Itr-048481	Ictidomys tridecemlineatus	40.31	3.00e-42	166.00
IUUC-Laf-053640	Loxodonta africana	31.97	4.00e-53	202.00
IUUC-Mcc-055540	Macaca mulatta	29.66	2.00e-53	204.00
IUUC-Mmr-060840	Microcebus murinus	40.31	2.00e-43	171.00
IUUC-Mmu-064375	Mus musculus	36.97	5.00e-43	169.00
IUUC-Mpu-066797	Mustela putorius furo	39.38	2.00e-37	150.00
IUUC-Mlu-067996	Myotis lucifugus	40.00	6.00e-41	162.00
IUUC-Nle-069238	Nomascus leucogenys	43.63	1.00e-36	146.00
IUUC-Oga-089156	Otolemur garnettii	30.77	6.00e-63	235.00
IUUC-Oar-090056	Ovis aries	30.83	4.00e-55	209.00
IUUC-Ptr-090837	Pan troglodytes	47.26	1.00e-32	134.00
IUUC-Psi-093493	Pelodiscus sinensis	39.67	3.00e-30	126.00
IUUC-Pab-097607	Pongo abelii	30.79	2.00e-55	211.00
IUUC-Pva-102758	Pteropus vampyrus	39.69	9.00e-42	165.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence