iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074219

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02068715

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000029028.1	ENSOCUT00000033020.1	ENSOCUP00000026133.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-39	132.5	59	89
UBD/Beta-Prp	6.40e-57	193.0	183	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH   v++++f  +dt l+sGs+D+t+k+W+
   Q: 59   GHDHVVSSCHFcvDDTKLLSGSYDCTVKLWN 89
           899*********777***************9 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls......tgk 85
            +k+hh+  +t+ +f pd++ +a+ s d+tik+wdvt++ +l ++ + h ++++ ++f  +g +l t+s D+ +k+w++       +g 
   Q: 183  HVKDHHQRSLTACCFDPDSQKVASVSLDRTIKIWDVTSQATLLTIpKAHANAISNCCFTFSGHFLCTCSWDKSLKIWNVHtgefrnSGA 271
           5799*************************************************************************999899999999 PP
   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlk 167
           cv  +kghe sv s+ f +++++l+sG+ d+t+ +wd+ +g+     l+gh+++v+ v+++++++ + s+s+Drt+r+W+++
   Q: 272  CVTLMKGHEGSVSSCFFARDSSFLISGGFDKTVAIWDITEGYRKL-ALKGHKDWVMDVAISSNKKWILSASKDRTMRIWNIE 352
           *********************************************.*********************************995 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

FKMSTPEARQ DRLLATLDPL ALGKSSLPSP PQSDMYYMQE EVWGDQEPLS KIPFKILSGH 60
DHVVSSCHFC VDDTKLLSGS YDCTVKLWNA FNGAVEREFE HGPEAPVVEC SVSADSRRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAAGATGT CCACACCGGA GGCGCGTCAG GATCGGCTCC TGGCGACCCT CGACCCACTG 60
GCCTTGGGCA AGAGTTCGCT GCCGTCACCG CCGCAGTCGG ATATGTACTA CATGCAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018391--PQQ_beta_propeller_repeat
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00564--PQQ
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	80.00	7.00e-141	493.00
IUUC-Apl-003571	Anas platyrhynchos	58.61	4.00e-117	414.00
IUUC-Aca-005232	Anolis carolinensis	48.82	3.00e-78	284.00
IUUC-Ame-011833	Astyanax mexicanus	47.94	1.00e-53	202.00
IUUC-Bta-013562	Bos taurus	76.55	3.00e-164	571.00
IUUC-Cja-019202	Callithrix jacchus	75.99	5.00e-169	587.00
IUUC-Cfa-021095	Canis familiaris	74.26	6.00e-167	580.00
IUUC-Cpo-022170	Cavia porcellus	76.41	2.00e-174	604.00
IUUC-Csa-024218	Chlorocebus sabaeus	79.09	3.00e-178	617.00
IUUC-Cho-024561	Choloepus hoffmanni	80.34	3.00e-113	401.00
IUUC-Dno-029722	Dasypus novemcinctus	76.16	2.00e-143	501.00
IUUC-Dor-030464	Dipodomys ordii	67.70	5.00e-134	470.00
IUUC-Ete-032931	Echinops telfairi	63.48	1.00e-98	352.00
IUUC-Eca-034428	Equus caballus	81.42	4.00e-162	563.00
IUUC-Eeu-034568	Erinaceus europaeus	59.03	4.00e-99	354.00
IUUC-Fca-035707	Felis catus	73.80	6.00e-162	563.00
IUUC-Gmo-039646	Gadus morhua	44.05	4.00e-73	267.00
IUUC-Gga-040710	Gallus gallus	56.17	2.00e-107	382.00
IUUC-Ggo-044611	Gorilla gorilla	72.54	1.00e-79	290.00
IUUC-Hsa-046138	Homo sapiens	78.28	2.00e-175	608.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	67.65	1.00e-151	529.00
IUUC-Lch-050329	Latimeria chalumnae	52.65	4.00e-102	364.00
IUUC-Loc-052876	Lepisosteus oculatus	43.06	1.00e-33	135.00
IUUC-Laf-053777	Loxodonta africana	76.20	3.00e-169	587.00
IUUC-Mcc-055771	Macaca mulatta	79.41	5.00e-177	613.00
IUUC-Meu-056584	Macropus eugenii	45.96	2.00e-73	268.00
IUUC-Mga-059818	Meleagris gallopavo	54.78	6.00e-114	403.00
IUUC-Mmr-060639	Microcebus murinus	74.37	2.00e-145	508.00
IUUC-Mdo-062321	Monodelphis domestica	56.35	6.00e-129	454.00
IUUC-Mpu-066849	Mustela putorius furo	74.26	2.00e-164	572.00
IUUC-Mlu-067238	Myotis lucifugus	68.36	1.00e-150	526.00
IUUC-Ont-071230	Oreochromis niloticus	41.74	1.00e-73	269.00
IUUC-Oan-072698	Ornithorhynchus anatinus	62.92	2.00e-138	485.00
IUUC-Oga-087913	Otolemur garnettii	71.12	6.00e-164	570.00
IUUC-Oar-089977	Ovis aries	76.84	2.00e-163	568.00
IUUC-Ptr-090876	Pan troglodytes	78.82	2.00e-176	612.00
IUUC-Pan-091936	Papio anubis	84.50	7.00e-101	359.00
IUUC-Psi-093015	Pelodiscus sinensis	53.60	2.00e-79	288.00
IUUC-Pma-094552	Petromyzon marinus	33.90	2.00e-32	131.00
IUUC-Pfo-096240	Poecilia formosa	41.57	1.00e-67	251.00
IUUC-Pab-097983	Pongo abelii	68.63	1.00e-146	512.00
IUUC-Pca-100752	Procavia capensis	60.70	8.00e-126	443.00
IUUC-Pva-102199	Pteropus vampyrus	68.90	1.00e-152	532.00
IUUC-Rno-106062	Rattus norvegicus	68.90	3.00e-158	551.00
IUUC-Sar-113167	Sorex araneus	50.36	2.00e-33	135.00
IUUC-Ssc-116089	Sus scrofa	73.12	4.00e-161	560.00
IUUC-Tbe-127860	Tupaia belangeri	64.88	7.00e-142	496.00
IUUC-Ttr-129152	Tursiops truncatus	74.16	4.00e-156	544.00
IUUC-Vpa-130745	Vicugna pacos	69.60	1.00e-152	532.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence