iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007473

UUCD1 version

UUC-ArT-00223

Ensembl Protein ID

AT5G62460.3

UniProt Accession

Q9FJJ6; Q9FJJ6_ARATH

Genbank Protein ID

AAL31206.1; AAM98316.1; AED97609.1; ANM68309.1; BAB11496.1

Protein Name

AT5g62460/K19B1_7; At5g62460/K19B1_7; Putative uncharacterized protein; RING/FYVE/PHD zinc finger superfamily protein

Genbank Nucleotide ID

AY060581; AY142052; CP002688; CP002688; AB015469

Gene Name

At5g62460; K19B1.7; K19B1_7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G62460	AT5G62460.3	AT5G62460.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	42.31	6.00e-08	56.20	IUUC-Hsa-046250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MDNVFLHIEA KREMADDQSS STDRLVKPES LNSDRGSNQS IESSGESSRA QGSTSLSTTK 60
SMDGKKTEEE ETTEQRDVDD EEEPLIQSVE CRICQEEDSV KNLESPCSCS GSLKYAHRKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATATATTTA TCTGTTTACA CGCGCTTCGA AATTTTGATT TACTTATCTG AATATTTTTC 60
CAGACCGAAC ATCAAACAAG AAAACACATT TGTCCGAATT TCATCTTGAG AGCTGTTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR022143--DUF3675
IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12428--DUF3675
PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0008270--F:zinc ion binding
GO:0071470--P:cellular response to osmotic stress
GO:0071472--P:cellular response to salt stress

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001957	Ailuropoda melanoleuca	42.00	3.00e-09	55.10
IUUC-Atr-002860	Amborella trichopoda	71.00	1.00e-66	245.00
IUUC-Apl-004200	Anas platyrhynchos	38.00	7.00e-09	53.50
IUUC-Aca-005012	Anolis carolinensis	44.00	9.00e-10	56.60
IUUC-Bta-012719	Bos taurus	42.31	2.00e-09	56.20
IUUC-Bdi-014827	Brachypodium distachyon	66.07	6.00e-60	223.00
IUUC-Cja-019689	Callithrix jacchus	42.00	2.00e-09	55.10
IUUC-Cfa-020911	Canis familiaris	42.00	3.00e-09	55.10
IUUC-Cpo-021311	Cavia porcellus	42.31	1.00e-09	56.60
IUUC-Csa-024010	Chlorocebus sabaeus	42.00	3.00e-09	55.10
IUUC-Cho-024792	Choloepus hoffmanni	42.31	1.00e-09	56.20
IUUC-Dno-029652	Dasypus novemcinctus	42.31	1.00e-09	56.60
IUUC-Dor-030811	Dipodomys ordii	42.31	1.00e-09	56.20
IUUC-Ete-032571	Echinops telfairi	42.00	3.00e-09	55.10
IUUC-Eca-034077	Equus caballus	42.31	1.00e-09	56.20
IUUC-Fca-036126	Felis catus	42.00	2.00e-09	55.10
IUUC-Fal-036875	Ficedula albicollis	35.38	2.00e-09	55.50
IUUC-Gmo-039433	Gadus morhua	41.18	3.00e-09	55.50
IUUC-Gga-041200	Gallus gallus	35.38	1.00e-09	55.80
IUUC-Ggo-044663	Gorilla gorilla	42.31	2.00e-09	55.80
IUUC-Hsa-046250	Homo sapiens	42.31	1.00e-09	56.20
IUUC-Hvu-047133	Hordeum vulgare	54.55	2.00e-55	208.00
IUUC-Itr-048606	Ictidomys tridecemlineatus	42.31	2.00e-09	55.80
IUUC-Lch-049563	Latimeria chalumnae	39.29	1.00e-09	56.60
IUUC-Loc-051876	Lepisosteus oculatus	41.07	1.00e-09	57.00
IUUC-Laf-054358	Loxodonta africana	42.31	1.00e-09	56.60
IUUC-Mcc-055132	Macaca mulatta	42.31	2.00e-09	56.20
IUUC-Meu-056883	Macropus eugenii	42.00	2.00e-08	53.10
IUUC-Mga-060053	Meleagris gallopavo	38.00	5.00e-09	53.90
IUUC-Mmr-061668	Microcebus murinus	42.31	1.00e-09	56.20
IUUC-Mdo-062134	Monodelphis domestica	42.31	1.00e-09	56.20
IUUC-Mac-064882	Musa acuminata	66.52	1.00e-61	229.00
IUUC-Mpu-065878	Mustela putorius furo	42.31	1.00e-09	55.80
IUUC-Mlu-067572	Myotis lucifugus	42.31	1.00e-09	56.20
IUUC-Nle-068993	Nomascus leucogenys	42.31	2.00e-09	56.20
IUUC-Opr-071182	Ochotona princeps	42.31	1.00e-09	56.20
IUUC-Ont-072653	Oreochromis niloticus	44.26	1.00e-09	58.20
IUUC-Ocu-074430	Oryctolagus cuniculus	42.00	3.00e-09	55.10
IUUC-Oba-075948	Oryza barthii	67.26	2.00e-58	218.00
IUUC-Obr-076491	Oryza brachyantha	61.25	6.00e-58	216.00
IUUC-Ogl-077439	Oryza glaberrima	67.26	2.00e-58	218.00
IUUC-Ogu-078523	Oryza glumaepatula	55.26	8.00e-59	219.00
IUUC-Olo-080950	Oryza longistaminata	62.23	5.00e-46	177.00
IUUC-Ome-081221	Oryza meridionalis	67.71	1.00e-59	222.00
IUUC-Oni-082096	Oryza nivara	66.82	3.00e-58	217.00
IUUC-Opu-083949	Oryza punctata	67.71	1.00e-59	222.00
IUUC-Oru-085237	Oryza rufipogon	67.26	2.00e-58	218.00
IUUC-Osa-085634	Oryza sativa	62.29	4.00e-52	197.00
IUUC-Ola-087504	Oryzias latipes	39.29	1.00e-09	57.00
IUUC-Oga-088000	Otolemur garnettii	42.31	2.00e-09	56.20
IUUC-Oar-089761	Ovis aries	42.00	3.00e-09	55.10
IUUC-Ptr-090674	Pan troglodytes	42.31	2.00e-09	56.20
IUUC-Pan-092400	Papio anubis	42.31	2.00e-09	56.20
IUUC-Psi-093674	Pelodiscus sinensis	42.00	3.00e-09	55.10
IUUC-Pma-094464	Petromyzon marinus	40.00	2.00e-09	55.10
IUUC-Pfo-097278	Poecilia formosa	42.31	1.00e-09	56.20
IUUC-Pab-098050	Pongo abelii	42.00	3.00e-09	55.10
IUUC-Pop-099863	Populus trichocarpa	57.57	9.00e-64	236.00
IUUC-Pva-103060	Pteropus vampyrus	42.00	3.00e-09	55.10
IUUC-Rno-104870	Rattus norvegicus	42.00	2.00e-09	55.10
IUUC-Sha-106546	Sarcophilus harrisii	42.31	1.00e-09	56.20
IUUC-Smo-109144	Selaginella moellendorffii	72.73	4.00e-54	202.00
IUUC-Sit-110567	Setaria italica	69.86	4.00e-61	227.00
IUUC-Sly-110996	Solanum lycopersicum	60.00	3.00e-59	221.00
IUUC-Stu-112782	Solanum tuberosum	60.73	1.00e-60	226.00
IUUC-Sar-113720	Sorex araneus	42.00	2.00e-09	55.50
IUUC-Sbi-114552	Sorghum bicolor	69.38	2.00e-60	224.00
IUUC-Ssc-116322	Sus scrofa	42.00	3.00e-09	55.10
IUUC-Tgu-116681	Taeniopygia guttata	38.00	6.00e-09	53.50
IUUC-Tru-118357	Takifugu rubripes	39.29	1.00e-09	57.00
IUUC-Tsy-119057	Tarsius syrichta	42.00	2.00e-09	55.10
IUUC-Tni-120712	Tetraodon nigroviridis	41.07	5.00e-10	57.80
IUUC-Tca-121468	Theobroma cacao	67.46	2.00e-59	221.00
IUUC-Tae-124189	Triticum aestivum	63.87	2.00e-69	254.00
IUUC-Ttr-128776	Tursiops truncatus	42.00	3.00e-09	55.10
IUUC-Vpa-130196	Vicugna pacos	39.22	1.00e-08	53.10
IUUC-Vvi-131510	Vitis vinifera	56.77	2.00e-56	212.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence