iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000018328.1	ENSLACT00000021001.1	ENSLACP00000020861.1
ENSLACG00000018328.1	ENSLACT00000021002.1	ENSLACP00000020862.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.00e-09	37.2	836	880

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C+vC++gge    l++CekC ++fH +C+ ++   ++p+ e wiC+ Cr
   Q: 836  DWCAVCQNGGE----LLCCEKCPKVFHLTCHVPT-LLSFPSGE-WICTFCR 880
           79*********....*******************.*******8.******8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MATSNGPSGF KEEKMAENKG GGESECPASS NNNGGENAEP QAVEETENAD KNAEESQAPP 60
AASSSSSSAS NPPASSPVNL LDTCAVCKQS LQSRELEPKL LPCLHSFCRR CLPEPERQLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAAACGTGT GTGCGTAAAT GGCGACGTCA AACGGTCCGT CGGGGTTCAA AGAGGAAAAG 60
ATGGCGGAAA ACAAAGGCGG TGGGGAGAGC GAATGTCCAG CGAGCAGCAA TAACAACGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003649--Bbox_C
IPR001487--Bromodomain
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50014--BROMODOMAIN_2
PS50119--ZF_BBOX
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00439--Bromodomain
PF00628--PHD
PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00502--BBC
SM00336--BBOX
SM00297--BROMO
SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002364	Ailuropoda melanoleuca	81.10	0.00e+00	1342.00
IUUC-Apl-003894	Anas platyrhynchos	83.82	0.00e+00	1284.00
IUUC-Aca-004658	Anolis carolinensis	82.79	0.00e+00	1296.00
IUUC-Ame-011619	Astyanax mexicanus	59.44	0.00e+00	954.00
IUUC-Bta-013341	Bos taurus	80.80	0.00e+00	1300.00
IUUC-Cja-018733	Callithrix jacchus	81.80	0.00e+00	1356.00
IUUC-Cfa-020725	Canis familiaris	81.39	0.00e+00	1318.00
IUUC-Cpo-021833	Cavia porcellus	81.15	0.00e+00	1337.00
IUUC-Csa-023040	Chlorocebus sabaeus	81.69	0.00e+00	1310.00
IUUC-Cho-024934	Choloepus hoffmanni	79.12	0.00e+00	1237.00
IUUC-Dre-027797	Danio rerio	70.43	4.00e-170	592.00
IUUC-Dno-028955	Dasypus novemcinctus	81.47	0.00e+00	1391.00
IUUC-Dor-030744	Dipodomys ordii	42.05	5.00e-74	272.00
IUUC-Dme-032143	Drosophila melanogaster	32.65	4.00e-47	183.00
IUUC-Ete-032728	Echinops telfairi	79.24	2.00e-176	613.00
IUUC-Eca-033573	Equus caballus	80.43	0.00e+00	1312.00
IUUC-Eeu-035138	Erinaceus europaeus	70.12	0.00e+00	715.00
IUUC-Fca-035776	Felis catus	80.99	0.00e+00	1241.00
IUUC-Fal-037583	Ficedula albicollis	84.50	0.00e+00	1336.00
IUUC-Gmo-039353	Gadus morhua	59.84	0.00e+00	658.00
IUUC-Gga-040874	Gallus gallus	83.81	0.00e+00	1379.00
IUUC-Gac-041689	Gasterosteus aculeatus	54.67	0.00e+00	989.00
IUUC-Ggo-045151	Gorilla gorilla	78.79	0.00e+00	955.00
IUUC-Hsa-046169	Homo sapiens	81.58	0.00e+00	1307.00
IUUC-Itr-048262	Ictidomys tridecemlineatus	61.19	1.00e-152	534.00
IUUC-Loc-051992	Lepisosteus oculatus	71.89	0.00e+00	1186.00
IUUC-Laf-054552	Loxodonta africana	80.92	0.00e+00	1257.00
IUUC-Mcc-055744	Macaca mulatta	81.58	0.00e+00	1307.00
IUUC-Meu-056647	Macropus eugenii	89.33	0.00e+00	642.00
IUUC-Mga-059589	Meleagris gallopavo	85.07	0.00e+00	867.00
IUUC-Mmr-060727	Microcebus murinus	81.54	0.00e+00	1336.00
IUUC-Mdo-063029	Monodelphis domestica	81.47	0.00e+00	1363.00
IUUC-Mmu-064033	Mus musculus	80.82	0.00e+00	1358.00
IUUC-Mpu-066679	Mustela putorius furo	81.47	0.00e+00	1337.00
IUUC-Mlu-067286	Myotis lucifugus	80.99	0.00e+00	1248.00
IUUC-Nle-069156	Nomascus leucogenys	81.39	0.00e+00	1304.00
IUUC-Opr-070309	Ochotona princeps	73.15	0.00e+00	1070.00
IUUC-Ont-071586	Oreochromis niloticus	54.52	0.00e+00	954.00
IUUC-Oan-073205	Ornithorhynchus anatinus	81.42	0.00e+00	1097.00
IUUC-Ocu-074667	Oryctolagus cuniculus	78.17	0.00e+00	1223.00
IUUC-Ola-086481	Oryzias latipes	51.81	0.00e+00	906.00
IUUC-Oga-089101	Otolemur garnettii	81.37	0.00e+00	1338.00
IUUC-Oar-090167	Ovis aries	81.26	0.00e+00	1331.00
IUUC-Ptr-090901	Pan troglodytes	81.69	0.00e+00	1309.00
IUUC-Pan-092448	Papio anubis	82.75	0.00e+00	1315.00
IUUC-Psi-093657	Pelodiscus sinensis	83.18	0.00e+00	1165.00
IUUC-Pma-094506	Petromyzon marinus	65.15	2.00e-51	193.00
IUUC-Pfo-097104	Poecilia formosa	68.41	6.00e-156	545.00
IUUC-Pab-097704	Pongo abelii	81.58	0.00e+00	1339.00
IUUC-Pca-101001	Procavia capensis	68.22	3.00e-150	525.00
IUUC-Pva-102733	Pteropus vampyrus	77.33	0.00e+00	1192.00
IUUC-Rno-105512	Rattus norvegicus	81.04	0.00e+00	1347.00
IUUC-Sha-107423	Sarcophilus harrisii	80.32	0.00e+00	1259.00
IUUC-Sar-113181	Sorex araneus	71.99	1.00e-122	434.00
IUUC-Ssc-116330	Sus scrofa	76.06	0.00e+00	1138.00
IUUC-Tgu-117388	Taeniopygia guttata	71.24	0.00e+00	1028.00
IUUC-Tru-118728	Takifugu rubripes	53.59	0.00e+00	906.00
IUUC-Tsy-119053	Tarsius syrichta	80.98	0.00e+00	903.00
IUUC-Tni-120279	Tetraodon nigroviridis	45.78	1.00e-144	506.00
IUUC-Tbe-127573	Tupaia belangeri	78.31	8.00e-155	541.00
IUUC-Ttr-128594	Tursiops truncatus	81.26	0.00e+00	1328.00
IUUC-Vpa-130619	Vicugna pacos	72.10	0.00e+00	749.00
IUUC-Xtr-132837	Xenopus tropicalis	80.98	0.00e+00	1306.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence