iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	dbPTM	UniProt
PHOSIDA	BioGRID
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
UBD/Alpha-Helix/UBA	UBA	24722989

Classification

Family	E-value	Score	Start	End
UBD/Alpha-Helix/UBA	1.10e-08	33.5	196	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGF.dreealqaLraannnleaAveyL 38
           + +l++l++MGF d++++l aL +a++n+++A++yL
   Q: 196  SRQLAELKDMGFgDTNKNLDALSSAHGNINRAIDYL 231
           6789*******************************9 PP

Organism

Saccharomyces cerevisiae

Functional Description
(View)

Present with 937 molecules/cell in log phase SD medium.

Protein Sequence
(Fasta)

MRFRSSSHSL KHVDRELKEL INSSENANKC GECGNFYPTW CSVNLGVFLC GRCASVHRKV 60
FGSRDDDAFS NVKSLSMDRW TREDIDELVS LGGNKGNARF WNPKNVPFPF DGDDDKAIVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGTTTA GGAGTTCTTC CCATAGCTTA AAACATGTTG ACAGAGAATT AAAGGAGTTG 60
ATTAATTCGT CCGAGAATGC CAATAAATGC GGTGAATGTG GTAATTTCTA CCCAACTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001164--ArfGAP
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50115--ARFGAP
PS50030--UBA

Pfam

PF01412--ArfGap
PF00627--UBA

PRINTS

PR00405--REVINTRACTNG

SMART

SM00105--ArfGap
SM00165--UBA

Gene Ontology

GO:0030479--C:actin cortical patch
GO:0005634--C:nucleus
GO:0005096--F:GTPase activator activity
GO:0046872--F:metal ion binding
GO:0070491--F:repressing transcription factor binding
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0006897--P:endocytosis
GO:0010512--P:negative regulation of phosphatidylinositol biosynthetic process
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated
GO:0007624--P:ultradian rhythm

KEGG

sce:YGL181W

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001715	Ailuropoda melanoleuca	25.00	4.00e-08	52.00
IUUC-Apl-004017	Anas platyrhynchos	32.39	8.00e-07	47.80
IUUC-Aca-004813	Anolis carolinensis	28.70	3.00e-07	48.90
IUUC-Ago-007990	Ashbya gossypii	58.14	5.00e-44	169.00
IUUC-Afl-008446	Aspergillus flavus	30.32	5.00e-18	84.00
IUUC-Afu-009002	Aspergillus fumigatus	42.00	5.00e-17	80.90
IUUC-Ani-009433	Aspergillus nidulans	31.60	1.00e-25	109.00
IUUC-Ang-009739	Aspergillus niger	32.88	4.00e-28	117.00
IUUC-Aor-010082	Aspergillus oryzae	31.56	1.00e-27	116.00
IUUC-Bgr-012127	Blumeria graminis	28.51	1.00e-17	83.20
IUUC-Bci-013879	Botrytis cinerea	29.84	2.00e-23	102.00
IUUC-Cja-019378	Callithrix jacchus	25.00	5.00e-08	51.60
IUUC-Cpo-021882	Cavia porcellus	25.00	6.00e-08	51.60
IUUC-Csa-023903	Chlorocebus sabaeus	25.00	5.00e-08	51.60
IUUC-Cho-024955	Choloepus hoffmanni	28.92	4.00e-07	48.90
IUUC-Cgl-026399	Colletotrichum gloeosporioides	28.51	4.00e-21	94.40
IUUC-Cne-026976	Cryptococcus neoformans	41.94	3.00e-20	90.50
IUUC-Dno-029662	Dasypus novemcinctus	25.00	1.00e-07	50.10
IUUC-Dse-031303	Dothistroma septosporum	39.66	5.00e-21	94.40
IUUC-Eeu-035275	Erinaceus europaeus	27.71	1.00e-06	47.00
IUUC-Fal-036825	Ficedula albicollis	32.39	5.00e-07	48.50
IUUC-Fox-037687	Fusarium oxysporum	32.50	8.00e-28	116.00
IUUC-Gmo-039588	Gadus morhua	29.58	6.00e-06	44.70
IUUC-Ggr-039997	Gaeumannomyces graminis	28.96	7.00e-22	97.10
IUUC-Gga-041168	Gallus gallus	32.39	8.00e-07	47.80
IUUC-Gac-041493	Gasterosteus aculeatus	29.58	6.00e-06	44.70
IUUC-Ggo-045273	Gorilla gorilla	25.00	4.00e-08	52.00
IUUC-Hsa-045946	Homo sapiens	25.00	5.00e-08	51.60
IUUC-Itr-048570	Ictidomys tridecemlineatus	25.00	3.00e-08	52.40
IUUC-Kpa-049331	Komagataella pastoris	55.36	6.00e-30	122.00
IUUC-Lch-050495	Latimeria chalumnae	27.82	4.00e-08	52.00
IUUC-Lma-053193	Leptosphaeria maculans	33.90	9.00e-16	76.30
IUUC-Laf-053716	Loxodonta africana	25.00	1.00e-07	50.10
IUUC-Mcc-054921	Macaca mulatta	25.00	5.00e-08	51.60
IUUC-Meu-056172	Macropus eugenii	28.85	1.00e-07	50.80
IUUC-Mor-057115	Magnaporthe oryzae	39.32	8.00e-23	100.00
IUUC-Mpo-057623	Magnaporthe poae	29.07	6.00e-21	94.00
IUUC-Mla-059095	Melampsora laricipopulina	37.38	5.00e-18	83.60
IUUC-Mga-059860	Meleagris gallopavo	30.61	5.00e-09	53.90
IUUC-Mvi-060310	Microbotryum violaceum	36.17	1.00e-12	66.60
IUUC-Mmr-060919	Microcebus murinus	25.00	4.00e-08	52.00
IUUC-Mdo-062814	Monodelphis domestica	26.24	3.00e-07	49.30
IUUC-Mmu-063683	Mus musculus	25.00	5.00e-08	51.60
IUUC-Mlu-067593	Myotis lucifugus	26.43	2.00e-09	56.20
IUUC-Ncr-068796	Neurospora crassa	31.25	5.00e-22	97.80
IUUC-Ocu-074259	Oryctolagus cuniculus	25.00	4.00e-08	52.00
IUUC-Oba-075644	Oryza barthii	36.89	1.00e-15	74.70
IUUC-Ogl-077781	Oryza glaberrima	36.89	1.00e-15	74.70
IUUC-Oin-079062	Oryza indica	36.89	1.00e-15	74.70
IUUC-Oni-082151	Oryza nivara	36.89	1.00e-15	75.10
IUUC-Oru-084368	Oryza rufipogon	36.89	1.00e-15	74.70
IUUC-Osa-085311	Oryza sativa	36.89	1.00e-15	74.70
IUUC-Ola-087435	Oryzias latipes	26.92	2.00e-09	56.20
IUUC-Oga-088179	Otolemur garnettii	25.00	5.00e-08	51.60
IUUC-Ptr-091408	Pan troglodytes	25.00	5.00e-08	52.00
IUUC-Pan-092196	Papio anubis	25.00	5.00e-08	51.60
IUUC-Psi-093612	Pelodiscus sinensis	27.88	6.00e-07	48.10
IUUC-Pma-094639	Petromyzon marinus	35.11	3.00e-14	70.90
IUUC-Ppa-095411	Physcomitrella patens	35.59	7.00e-17	78.60
IUUC-Pab-098254	Pongo abelii	24.80	6.00e-08	51.20
IUUC-Pte-104047	Pyrenophora teres	29.32	1.00e-23	102.00
IUUC-Pyt-104690	Pyrenophora triticirepentis	28.20	5.00e-20	90.50
IUUC-Rno-105530	Rattus norvegicus	25.00	4.00e-08	52.00
IUUC-Sha-106473	Sarcophilus harrisii	25.55	2.00e-07	49.30
IUUC-Sja-107965	Schizosaccharomyces japonicus	40.71	1.00e-20	92.40
IUUC-Spo-108088	Schizosaccharomyces pombe	30.80	7.00e-24	103.00
IUUC-Ssl-108437	Sclerotinia sclerotiorum	26.91	2.00e-19	89.00
IUUC-Sar-113741	Sorex araneus	34.96	2.00e-12	66.60
IUUC-Sre-114990	Sporisorium reilianum	37.38	1.00e-16	79.30
IUUC-Tgu-117155	Taeniopygia guttata	32.39	4.00e-07	48.50
IUUC-Tru-118200	Takifugu rubripes	29.23	9.00e-09	53.90
IUUC-Tni-119932	Tetraodon nigroviridis	35.62	5.00e-08	51.60
IUUC-Tre-122184	Trichoderma reesei	36.81	4.00e-22	97.80
IUUC-Tvi-122676	Trichoderma virens	30.89	1.00e-25	109.00
IUUC-Tme-127201	Tuber melanosporum	38.46	3.00e-22	97.80
IUUC-Tbe-127356	Tupaia belangeri	29.41	3.00e-07	48.50
IUUC-Uma-129415	Ustilago maydis	35.77	1.00e-16	79.30
IUUC-Vda-129911	Verticillium dahliae	39.66	3.00e-21	94.70

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence