iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__1100__AT5G52140.1	fgenesh2_kg.8__1100__AT5G52140.1	fgenesh2_kg.8__1100__AT5G52140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-06	27.4	234	275

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+   ++   +lpC+H++h+dC+ +w       +++  C +C+
   Q: 234  CSICLVDYaegDK-ITTLPCKHIYHKDCISQW------LKQNKVCCVCK 275
           ********55333.888***************......999999***96 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSRLVNQSSL DENIAIYLQY ELSELTVNDY VIGREIQQQY QNKFICNDAA IALEMQQEEV 60
ACVHSCLHDD EGLARTLQDL EGNLQPSLSD DEKLARYLQE QDESANNTDD DIQETHHHHY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCGGC TTGTAAACCA GTCGTCTCTC GATGAAAATA TTGCAATCTA TTTACAATAT 60
GAGTTATCAG AACTGACGGT TAATGATTAT GTTATTGGTC GGGAGATTCA ACAACAATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_495284

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001791	Ailuropoda melanoleuca	35.64	2.00e-16	79.00
IUUC-Aca-005299	Anolis carolinensis	36.63	2.00e-16	79.00
IUUC-Ath-007520	Arabidopsis thaliana	85.36	3.00e-138	483.00
IUUC-Ame-011948	Astyanax mexicanus	35.00	9.00e-17	80.10
IUUC-Bta-012470	Bos taurus	35.64	5.00e-16	77.80
IUUC-Bol-016044	Brassica oleracea	60.42	2.00e-78	285.00
IUUC-Cfa-020297	Canis familiaris	35.64	3.00e-16	78.60
IUUC-Dre-028365	Danio rerio	34.00	9.00e-16	77.00
IUUC-Dno-029962	Dasypus novemcinctus	33.66	4.00e-15	74.70
IUUC-Ete-032985	Echinops telfairi	33.33	1.00e-13	71.60
IUUC-Eca-033911	Equus caballus	35.64	2.00e-16	79.00
IUUC-Eeu-034773	Erinaceus europaeus	33.33	7.00e-14	72.00
IUUC-Fca-035641	Felis catus	35.64	3.00e-16	78.60
IUUC-Gmo-039613	Gadus morhua	32.00	5.00e-15	73.90
IUUC-Gac-042259	Gasterosteus aculeatus	35.00	9.00e-16	75.50
IUUC-Lch-049656	Latimeria chalumnae	34.65	7.00e-14	70.90
IUUC-Laf-053804	Loxodonta africana	33.04	5.00e-15	76.30
IUUC-Meu-056052	Macropus eugenii	33.04	5.00e-15	76.30
IUUC-Mga-059350	Meleagris gallopavo	32.17	9.00e-15	75.50
IUUC-Mmr-061389	Microcebus murinus	33.66	4.00e-15	74.70
IUUC-Mdo-062317	Monodelphis domestica	32.73	2.00e-15	75.90
IUUC-Mmu-063102	Mus musculus	36.63	1.00e-16	79.70
IUUC-Mpu-066793	Mustela putorius furo	33.66	3.00e-15	75.10
IUUC-Mlu-067464	Myotis lucifugus	32.48	7.00e-14	72.40
IUUC-Opr-070646	Ochotona princeps	33.66	3.00e-15	75.10
IUUC-Ont-072005	Oreochromis niloticus	36.00	4.00e-17	81.30
IUUC-Oan-072924	Ornithorhynchus anatinus	34.65	6.00e-15	74.30
IUUC-Oga-087993	Otolemur garnettii	36.63	1.00e-16	79.70
IUUC-Oar-089588	Ovis aries	35.64	4.00e-16	78.20
IUUC-Pfo-096103	Poecilia formosa	36.63	1.00e-16	79.70
IUUC-Pab-097885	Pongo abelii	33.65	2.00e-14	74.30
IUUC-Pca-100561	Procavia capensis	32.76	7.00e-15	75.50
IUUC-Ptt-103976	Puccinia triticina	52.17	8.00e-11	59.70
IUUC-Rno-105973	Rattus norvegicus	36.63	1.00e-16	79.70
IUUC-Sha-107027	Sarcophilus harrisii	32.73	4.00e-15	75.10
IUUC-Sar-113383	Sorex araneus	33.66	3.00e-15	75.50
IUUC-Ssc-116357	Sus scrofa	35.64	3.00e-16	78.60
IUUC-Tru-118133	Takifugu rubripes	36.63	2.00e-16	79.30
IUUC-Tni-120104	Tetraodon nigroviridis	36.00	9.00e-17	80.10
IUUC-Vpa-130177	Vicugna pacos	35.64	4.00e-16	77.00
IUUC-Xtr-132963	Xenopus tropicalis	33.04	6.00e-15	75.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence