iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028145

UUCD1 version

UUC-DaR-00242

Ensembl Protein ID

ENSDARP00000138497.1

UniProt Accession

A0A0R4IUS5; A0A0R4IUS5_DANRE

Genbank Protein ID

ENSDARP00000138497

Protein Name

Ring finger protein 4

Genbank Nucleotide ID

BX004830

Gene Name

rnf4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000090993.2	ENSDART00000168959.1	ENSDARP00000138497.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.30e-07	30.5	126	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C++ +       +  +++ CgH+f+ +C+       +s s++ +CP+Cr
   Q: 126  CPVCMDVYseimdsGRLMVSTKCGHLFCSQCIR------DSLSRAHSCPTCR 171
           ******9966654433377799*********94......459999******8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSTTVTQRKR RTSTTCSRRG NSKRNRAQMS QTVMETIDVL ENDRTNSEDV VDLTCEGSEP 60
AVVDLTNNDS IVVVEDGVQR RVGPCTESYV LSSDEEEESS LRLSPGLLSS LRDSSRARST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGACGCGTT GAGAAATACA GTTCTTACTC TACTGTGATT TGTGTGGAAC GTTCGTTGTG 60
TGGCTGACAG TTGGAGAGTT CTGAGTATGT AACCGGTTAT TATCTAAAAC TGACGATCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

dre:557319

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	44.26	1.00e-11	63.50
IUUC-Aml-002206	Ailuropoda melanoleuca	41.92	2.00e-36	145.00
IUUC-Atr-002771	Amborella trichopoda	38.98	2.00e-09	55.80
IUUC-Apl-004120	Anas platyrhynchos	49.00	4.00e-40	157.00
IUUC-Aca-004236	Anolis carolinensis	50.79	3.00e-38	150.00
IUUC-Aly-006041	Arabidopsis lyrata	44.26	1.00e-11	63.20
IUUC-Ath-007007	Arabidopsis thaliana	44.26	1.00e-11	63.20
IUUC-Ame-011555	Astyanax mexicanus	82.47	2.00e-61	228.00
IUUC-Bta-012913	Bos taurus	46.84	4.00e-33	134.00
IUUC-Bdi-014655	Brachypodium distachyon	49.18	6.00e-12	64.30
IUUC-Bol-016418	Brassica oleracea	44.26	4.00e-11	62.00
IUUC-Bra-016890	Brassica rapa	43.86	9.00e-10	57.00
IUUC-Cja-019151	Callithrix jacchus	39.27	6.00e-34	136.00
IUUC-Cfa-020868	Canis familiaris	41.03	4.00e-34	137.00
IUUC-Cpo-022249	Cavia porcellus	44.21	6.00e-34	137.00
IUUC-Csa-024125	Chlorocebus sabaeus	39.47	8.00e-35	139.00
IUUC-Cin-025749	Ciona intestinalis	45.90	5.00e-14	71.20
IUUC-Csv-026318	Ciona savignyi	44.26	1.00e-13	69.70
IUUC-Dno-029605	Dasypus novemcinctus	43.46	1.00e-35	142.00
IUUC-Dor-030898	Dipodomys ordii	39.68	6.00e-33	134.00
IUUC-Dme-032177	Drosophila melanogaster	49.15	2.00e-12	66.60
IUUC-Ete-032694	Echinops telfairi	39.57	4.00e-33	134.00
IUUC-Eca-033443	Equus caballus	41.75	1.00e-35	142.00
IUUC-Eeu-034603	Erinaceus europaeus	65.28	4.00e-27	113.00
IUUC-Fca-035507	Felis catus	44.50	7.00e-34	136.00
IUUC-Fal-037382	Ficedula albicollis	46.73	2.00e-39	155.00
IUUC-Gmo-038960	Gadus morhua	57.25	1.00e-28	117.00
IUUC-Gga-040493	Gallus gallus	50.78	3.00e-39	154.00
IUUC-Gac-042194	Gasterosteus aculeatus	58.67	8.00e-48	182.00
IUUC-Gma-042666	Glycine max	40.98	7.00e-10	57.40
IUUC-Ggo-044726	Gorilla gorilla	39.47	4.00e-35	140.00
IUUC-Hsa-046212	Homo sapiens	39.47	4.00e-35	140.00
IUUC-Hvu-047630	Hordeum vulgare	44.26	2.00e-11	62.80
IUUC-Itr-047892	Ictidomys tridecemlineatus	42.02	2.00e-37	148.00
IUUC-Lpe-050920	Leersia perrieri	42.62	7.00e-11	60.80
IUUC-Loc-051907	Lepisosteus oculatus	63.16	8.00e-51	192.00
IUUC-Laf-054145	Loxodonta africana	40.96	5.00e-36	143.00
IUUC-Mcc-055689	Macaca mulatta	39.47	8.00e-35	139.00
IUUC-Meu-056654	Macropus eugenii	76.19	3.00e-27	114.00
IUUC-Mtr-058314	Medicago truncatula	50.00	3.00e-11	61.20
IUUC-Mga-059303	Meleagris gallopavo	51.27	3.00e-39	154.00
IUUC-Mmr-061355	Microcebus murinus	40.11	4.00e-35	140.00
IUUC-Mdo-062968	Monodelphis domestica	44.21	7.00e-37	146.00
IUUC-Mmu-064421	Mus musculus	42.78	3.00e-37	147.00
IUUC-Mac-064573	Musa acuminata	42.11	3.00e-12	66.20
IUUC-Mpu-066522	Mustela putorius furo	42.71	2.00e-36	145.00
IUUC-Mlu-067065	Myotis lucifugus	42.19	5.00e-36	144.00
IUUC-Nle-069198	Nomascus leucogenys	39.47	2.00e-34	139.00
IUUC-Opr-071141	Ochotona princeps	42.70	3.00e-36	144.00
IUUC-Oan-073341	Ornithorhynchus anatinus	39.33	1.00e-10	59.30
IUUC-Ocu-073787	Oryctolagus cuniculus	41.24	2.00e-37	148.00
IUUC-Oba-075460	Oryza barthii	38.67	2.00e-11	62.40
IUUC-Obr-076349	Oryza brachyantha	42.62	1.00e-10	60.10
IUUC-Ogl-077094	Oryza glaberrima	38.16	3.00e-11	62.00
IUUC-Ogu-078677	Oryza glumaepatula	38.67	2.00e-11	62.80
IUUC-Oin-079992	Oryza indica	38.16	3.00e-11	62.00
IUUC-Olo-080257	Oryza longistaminata	37.33	3.00e-11	62.00
IUUC-Ome-081943	Oryza meridionalis	38.16	3.00e-11	62.80
IUUC-Oni-082671	Oryza nivara	38.67	2.00e-11	62.40
IUUC-Opu-083644	Oryza punctata	38.67	2.00e-11	62.80
IUUC-Oru-084650	Oryza rufipogon	38.67	2.00e-11	62.40
IUUC-Osa-086110	Oryza sativa	38.16	3.00e-11	62.40
IUUC-Ola-086970	Oryzias latipes	54.26	9.00e-44	169.00
IUUC-Olu-087634	Ostreococcus lucimarinus	38.98	4.00e-10	57.40
IUUC-Oga-088242	Otolemur garnettii	42.86	6.00e-37	147.00
IUUC-Oar-089469	Ovis aries	43.75	6.00e-37	147.00
IUUC-Ptr-091254	Pan troglodytes	37.89	1.00e-31	129.00
IUUC-Pan-092776	Papio anubis	39.47	8.00e-35	139.00
IUUC-Psi-093929	Pelodiscus sinensis	51.00	1.00e-42	166.00
IUUC-Pma-094118	Petromyzon marinus	63.93	4.00e-20	89.00
IUUC-Ppa-095374	Physcomitrella patens	45.90	7.00e-11	60.80
IUUC-Pfo-097412	Poecilia formosa	58.28	3.00e-42	164.00
IUUC-Pab-098424	Pongo abelii	41.36	1.00e-35	142.00
IUUC-Pop-099483	Populus trichocarpa	40.98	2.00e-10	58.90
IUUC-Pca-100463	Procavia capensis	35.81	4.00e-12	64.30
IUUC-Ppe-101755	Prunus persica	42.62	2.00e-10	58.50
IUUC-Pva-102594	Pteropus vampyrus	32.88	6.00e-10	57.00
IUUC-Rno-105460	Rattus norvegicus	42.50	1.00e-34	139.00
IUUC-Sha-107487	Sarcophilus harrisii	45.73	9.00e-38	149.00
IUUC-Smo-108908	Selaginella moellendorffii	40.32	7.00e-09	53.90
IUUC-Sit-109959	Setaria italica	37.70	7.00e-05	41.60
IUUC-Stu-112694	Solanum tuberosum	41.89	1.00e-10	60.10
IUUC-Sar-113601	Sorex araneus	40.54	1.00e-34	139.00
IUUC-Sbi-114398	Sorghum bicolor	40.98	1.00e-05	43.10
IUUC-Ssc-115911	Sus scrofa	41.75	1.00e-35	142.00
IUUC-Tgu-117264	Taeniopygia guttata	49.47	1.00e-38	152.00
IUUC-Tru-117663	Takifugu rubripes	58.44	8.00e-45	172.00
IUUC-Tsy-118883	Tarsius syrichta	46.71	8.00e-32	129.00
IUUC-Tae-124872	Triticum aestivum	44.26	1.00e-11	63.50
IUUC-Tur-126408	Triticum urartu	33.73	7.00e-12	64.30
IUUC-Ttr-128950	Tursiops truncatus	71.43	1.00e-26	112.00
IUUC-Vvi-130833	Vitis vinifera	42.62	7.00e-11	60.80
IUUC-Xtr-132879	Xenopus tropicalis	48.12	3.00e-32	130.00
IUUC-Xma-133319	Xiphophorus maculatus	60.58	6.00e-40	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence