iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
miRTarBase	microRNA	TRANSFAC	RAID2
Post-translational Modifications (PTMs)
CPLM
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	3.70e-38	129.7	1142	1196

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 6    vqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFvekl 62
           +q+ly+y++ n+deL+l++ dvv+v+  e+ d gW +g++  ++  G fP n+v++l
   Q: 1142 FQALYNYTPRNEDELELRESDVVDVM--EKCDDGWFVGTSRRTKFFGTFPGNYVKRL 1196
           79***********************9..999***********************996 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MNTDSGGCAR KRAAMSVTLT SVKRVQSSPN LLAAGRESHS PDSAWRSYNG RNPETLNGDA 60
TYSSLAAKGF RSVRPNLQDK KSPTQSHITI NGNSGGAVSP VSYYQRPFSP SAYSLPASLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGAAAAAA AGAAAAATCT TTGGAGAGAA GAGAGCCACA GTGAGCACGC TAGTGCACAA 60
TTATTGCAGC CACGTGTGCC CGCAAGCTGG CCCTGCGACA AGCTGTTGAG TGCTGTTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR028516--ArgBP2
IPR001452--SH3_domain
IPR003127--SoHo_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50002--SH3
PS50831--SOHO
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF00018--SH3_1
PF14604--SH3_9
PF02208--Sorb

PRINTS

PR00452--SH3DOMAIN

SMART

SM00326--SH3
SM00459--Sorb

Gene Ontology

GO:0046872--F:metal ion binding
GO:0003723--F:RNA binding
GO:0007015--P:actin filament organization
GO:0007155--P:cell adhesion
GO:0016477--P:cell migration

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001503	Ailuropoda melanoleuca	86.68	0.00e+00	1991.00
IUUC-Apl-003194	Anas platyrhynchos	74.25	0.00e+00	1511.00
IUUC-Aca-004601	Anolis carolinensis	73.33	0.00e+00	1640.00
IUUC-Ame-011108	Astyanax mexicanus	49.57	2.00e-142	501.00
IUUC-Cja-019127	Callithrix jacchus	86.06	0.00e+00	1914.00
IUUC-Cfa-020779	Canis familiaris	88.47	0.00e+00	1988.00
IUUC-Cpo-021509	Cavia porcellus	87.91	0.00e+00	1959.00
IUUC-Csa-023258	Chlorocebus sabaeus	85.17	0.00e+00	1457.00
IUUC-Cho-024653	Choloepus hoffmanni	86.02	0.00e+00	1168.00
IUUC-Cin-025776	Ciona intestinalis	42.50	4.00e-28	119.00
IUUC-Dre-027543	Danio rerio	51.59	0.00e+00	924.00
IUUC-Dno-029585	Dasypus novemcinctus	79.28	0.00e+00	1690.00
IUUC-Dor-031047	Dipodomys ordii	86.98	0.00e+00	1780.00
IUUC-Ete-033186	Echinops telfairi	80.68	0.00e+00	1303.00
IUUC-Eca-033574	Equus caballus	93.31	3.00e-141	495.00
IUUC-Eeu-034786	Erinaceus europaeus	90.60	6.00e-126	445.00
IUUC-Fca-036437	Felis catus	87.87	0.00e+00	1837.00
IUUC-Fal-036738	Ficedula albicollis	75.67	0.00e+00	1499.00
IUUC-Gmo-039436	Gadus morhua	60.53	2.00e-81	298.00
IUUC-Gga-040705	Gallus gallus	85.50	4.00e-129	454.00
IUUC-Gac-041942	Gasterosteus aculeatus	46.97	1.00e-175	610.00
IUUC-Ggo-044915	Gorilla gorilla	87.75	0.00e+00	1982.00
IUUC-Hsa-045810	Homo sapiens	87.45	0.00e+00	1982.00
IUUC-Itr-048982	Ictidomys tridecemlineatus	89.21	0.00e+00	2056.00
IUUC-Lch-050409	Latimeria chalumnae	64.65	0.00e+00	1234.00
IUUC-Loc-051858	Lepisosteus oculatus	60.09	0.00e+00	1127.00
IUUC-Laf-053914	Loxodonta africana	85.83	0.00e+00	1956.00
IUUC-Mcc-055831	Macaca mulatta	85.98	0.00e+00	1615.00
IUUC-Meu-056682	Macropus eugenii	83.61	0.00e+00	929.00
IUUC-Mga-059448	Meleagris gallopavo	72.67	0.00e+00	1270.00
IUUC-Mmr-061058	Microcebus murinus	84.24	0.00e+00	1518.00
IUUC-Mdo-062277	Monodelphis domestica	73.26	1.00e-131	464.00
IUUC-Mmu-063626	Mus musculus	95.14	0.00e+00	2185.00
IUUC-Mpu-066464	Mustela putorius furo	84.43	0.00e+00	1389.00
IUUC-Mlu-067667	Myotis lucifugus	82.50	0.00e+00	1932.00
IUUC-Nle-069677	Nomascus leucogenys	87.48	0.00e+00	1985.00
IUUC-Opr-070844	Ochotona princeps	84.30	0.00e+00	1756.00
IUUC-Ont-071980	Oreochromis niloticus	48.88	0.00e+00	917.00
IUUC-Oan-073581	Ornithorhynchus anatinus	54.46	2.00e-166	579.00
IUUC-Ocu-074553	Oryctolagus cuniculus	87.23	0.00e+00	1993.00
IUUC-Ola-087178	Oryzias latipes	47.06	0.00e+00	776.00
IUUC-Oga-088984	Otolemur garnettii	85.71	0.00e+00	1902.00
IUUC-Oar-090142	Ovis aries	93.68	6.00e-141	494.00
IUUC-Ptr-090880	Pan troglodytes	86.61	0.00e+00	1792.00
IUUC-Pan-091761	Papio anubis	85.29	0.00e+00	1766.00
IUUC-Psi-093241	Pelodiscus sinensis	74.88	0.00e+00	1690.00
IUUC-Pfo-096481	Poecilia formosa	47.73	0.00e+00	759.00
IUUC-Pab-098118	Pongo abelii	83.09	0.00e+00	1366.00
IUUC-Pca-100371	Procavia capensis	71.17	0.00e+00	638.00
IUUC-Pva-102275	Pteropus vampyrus	88.21	0.00e+00	1861.00
IUUC-Sha-107564	Sarcophilus harrisii	80.83	0.00e+00	1851.00
IUUC-Sar-113106	Sorex araneus	84.54	0.00e+00	1784.00
IUUC-Tgu-116594	Taeniopygia guttata	74.05	0.00e+00	1588.00
IUUC-Tru-117686	Takifugu rubripes	47.24	0.00e+00	867.00
IUUC-Tsy-119376	Tarsius syrichta	77.66	0.00e+00	661.00
IUUC-Tni-119800	Tetraodon nigroviridis	63.14	3.00e-91	329.00
IUUC-Tbe-127334	Tupaia belangeri	83.01	0.00e+00	1495.00
IUUC-Ttr-128705	Tursiops truncatus	88.03	0.00e+00	1792.00
IUUC-Vpa-130293	Vicugna pacos	87.85	0.00e+00	1845.00
IUUC-Xtr-131872	Xenopus tropicalis	65.79	0.00e+00	1324.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence