iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-094033

Ensembl Protein ID

ENSPSIP00000013274.1

UniProt Accession

K7FZ14; K7FZ14_PELSI

Genbank Protein ID

ENSPSIP00000013274

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01203946

Gene Name

RFWD2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000011941.1	ENSPSIT00000013337.1	ENSPSIP00000013274.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-25	86.0	325	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWD 29
           +++++c+++     +ll+s+ + gt+ +WD
   Q: 325  NSKISCISWssYHkNLLASSDYEGTVILWD 354
           689******9622599************** PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MIEEAYMTKC GHSFCYKCIH QSLEDNNRCP KCNYVVDNID HLYPNFLVNE LILKQKQRFE 60
EKRFKLDHSN GHRWQIFQDL LGTDQDNLDL ANVNLMLELL VQKKKQLEAE SHAAQLQILM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTGAAG AAGCATACAT GACGAAATGT GGACACAGTT TCTGGTAAGA TTTTTATGTT 60
AAGCAAAATG TCCATCGAAC ATCCTATAAA ATGCATTCAT TACAGTTTGG TTAGAGTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0010212--P:response to ionizing radiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	40.00	5.00e-126	444.00
IUUC-Aml-001265	Ailuropoda melanoleuca	98.29	0.00e+00	1164.00
IUUC-Atr-002460	Amborella trichopoda	38.30	2.00e-120	426.00
IUUC-Apl-003796	Anas platyrhynchos	97.74	0.00e+00	1135.00
IUUC-Aca-005078	Anolis carolinensis	99.15	0.00e+00	1162.00
IUUC-Aly-006014	Arabidopsis lyrata	39.94	2.00e-126	446.00
IUUC-Ath-007636	Arabidopsis thaliana	39.94	2.00e-126	446.00
IUUC-Ame-011176	Astyanax mexicanus	96.69	1.00e-69	257.00
IUUC-Bta-012595	Bos taurus	98.31	0.00e+00	1170.00
IUUC-Bdi-014152	Brachypodium distachyon	39.25	6.00e-124	437.00
IUUC-Bol-016380	Brassica oleracea	40.41	8.00e-127	447.00
IUUC-Bra-017690	Brassica rapa	40.03	7.00e-122	431.00
IUUC-Cja-018926	Callithrix jacchus	97.97	0.00e+00	1164.00
IUUC-Cfa-021088	Canis familiaris	98.31	0.00e+00	1170.00
IUUC-Cpo-022442	Cavia porcellus	97.05	0.00e+00	1127.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	33.45	3.00e-33	135.00
IUUC-Csa-024119	Chlorocebus sabaeus	97.80	0.00e+00	1163.00
IUUC-Cho-024883	Choloepus hoffmanni	66.23	5.00e-106	378.00
IUUC-Cin-025375	Ciona intestinalis	55.37	0.00e+00	654.00
IUUC-Cme-027350	Cyanidioschyzon merolae	40.78	7.00e-80	291.00
IUUC-Dre-028453	Danio rerio	88.68	0.00e+00	1047.00
IUUC-Dno-029887	Dasypus novemcinctus	97.63	0.00e+00	1161.00
IUUC-Dor-031110	Dipodomys ordii	89.10	0.00e+00	872.00
IUUC-Ete-033016	Echinops telfairi	83.05	0.00e+00	957.00
IUUC-Eca-034403	Equus caballus	97.55	0.00e+00	1129.00
IUUC-Eeu-034690	Erinaceus europaeus	80.68	0.00e+00	934.00
IUUC-Fca-036475	Felis catus	97.22	0.00e+00	1134.00
IUUC-Fal-037189	Ficedula albicollis	98.31	0.00e+00	1169.00
IUUC-Gmo-039245	Gadus morhua	87.03	0.00e+00	1016.00
IUUC-Gga-040806	Gallus gallus	98.31	0.00e+00	1167.00
IUUC-Gac-042177	Gasterosteus aculeatus	88.36	0.00e+00	1049.00
IUUC-Gma-044187	Glycine max	38.65	2.00e-121	429.00
IUUC-Ggo-044430	Gorilla gorilla	96.60	0.00e+00	847.00
IUUC-Hsa-045853	Homo sapiens	97.97	0.00e+00	1164.00
IUUC-Hvu-047750	Hordeum vulgare	38.97	3.00e-96	346.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	98.75	2.00e-143	500.00
IUUC-Lch-050420	Latimeria chalumnae	92.75	0.00e+00	1095.00
IUUC-Lpe-051219	Leersia perrieri	38.18	3.00e-120	425.00
IUUC-Loc-052728	Lepisosteus oculatus	91.54	0.00e+00	1060.00
IUUC-Laf-053775	Loxodonta africana	97.27	0.00e+00	1163.00
IUUC-Meu-056595	Macropus eugenii	78.44	3.00e-179	621.00
IUUC-Mtr-058555	Medicago truncatula	40.50	8.00e-129	454.00
IUUC-Mga-059646	Meleagris gallopavo	97.74	0.00e+00	1133.00
IUUC-Mmr-060990	Microcebus murinus	98.29	0.00e+00	1164.00
IUUC-Mdo-062287	Monodelphis domestica	98.31	0.00e+00	1172.00
IUUC-Mmu-064097	Mus musculus	97.97	0.00e+00	1167.00
IUUC-Mac-065240	Musa acuminata	41.50	1.00e-130	459.00
IUUC-Mpu-066612	Mustela putorius furo	97.23	0.00e+00	1136.00
IUUC-Mlu-067967	Myotis lucifugus	95.44	0.00e+00	1135.00
IUUC-Nle-069543	Nomascus leucogenys	98.14	0.00e+00	1169.00
IUUC-Opr-070366	Ochotona princeps	82.37	0.00e+00	645.00
IUUC-Ont-071522	Oreochromis niloticus	88.79	0.00e+00	1052.00
IUUC-Oan-073409	Ornithorhynchus anatinus	97.75	0.00e+00	1135.00
IUUC-Ocu-073756	Oryctolagus cuniculus	97.72	0.00e+00	1133.00
IUUC-Oba-075149	Oryza barthii	38.66	3.00e-122	433.00
IUUC-Obr-076563	Oryza brachyantha	38.82	2.00e-122	432.00
IUUC-Ogl-077701	Oryza glaberrima	38.64	7.00e-123	434.00
IUUC-Ogu-078383	Oryza glumaepatula	38.64	7.00e-123	434.00
IUUC-Oin-079965	Oryza indica	36.87	2.00e-114	406.00
IUUC-Olo-080639	Oryza longistaminata	39.02	1.00e-121	430.00
IUUC-Ome-081821	Oryza meridionalis	38.25	1.00e-114	407.00
IUUC-Oni-082622	Oryza nivara	38.64	7.00e-123	434.00
IUUC-Opu-083295	Oryza punctata	38.64	1.00e-122	433.00
IUUC-Oru-084661	Oryza rufipogon	38.64	7.00e-123	434.00
IUUC-Osa-085766	Oryza sativa	38.64	7.00e-123	434.00
IUUC-Ola-086727	Oryzias latipes	87.86	0.00e+00	1055.00
IUUC-Olu-087702	Ostreococcus lucimarinus	42.99	2.00e-69	254.00
IUUC-Oga-088215	Otolemur garnettii	95.93	0.00e+00	1139.00
IUUC-Oar-089880	Ovis aries	98.08	0.00e+00	1134.00
IUUC-Ptr-090597	Pan troglodytes	97.97	0.00e+00	1164.00
IUUC-Pan-091987	Papio anubis	98.31	0.00e+00	1170.00
IUUC-Pma-094587	Petromyzon marinus	70.36	0.00e+00	761.00
IUUC-Ppa-095256	Physcomitrella patens	38.26	1.00e-126	447.00
IUUC-Pfo-097388	Poecilia formosa	87.73	0.00e+00	1030.00
IUUC-Pab-098029	Pongo abelii	97.97	0.00e+00	1164.00
IUUC-Pop-099319	Populus trichocarpa	38.62	3.00e-125	442.00
IUUC-Pca-100846	Procavia capensis	89.32	0.00e+00	1060.00
IUUC-Ppe-101250	Prunus persica	38.05	2.00e-115	409.00
IUUC-Pva-102407	Pteropus vampyrus	97.97	0.00e+00	1156.00
IUUC-Rno-105312	Rattus norvegicus	97.97	0.00e+00	1166.00
IUUC-Sha-106514	Sarcophilus harrisii	98.92	0.00e+00	773.00
IUUC-Smo-109418	Selaginella moellendorffii	39.97	1.00e-125	443.00
IUUC-Sit-110248	Setaria italica	38.45	1.00e-123	436.00
IUUC-Sly-110964	Solanum lycopersicum	40.50	3.00e-127	448.00
IUUC-Stu-112882	Solanum tuberosum	40.56	1.00e-127	450.00
IUUC-Sar-113230	Sorex araneus	71.45	0.00e+00	783.00
IUUC-Sbi-113962	Sorghum bicolor	37.35	2.00e-118	419.00
IUUC-Ssc-115987	Sus scrofa	96.48	2.00e-152	531.00
IUUC-Tgu-116471	Taeniopygia guttata	98.12	0.00e+00	1159.00
IUUC-Tru-118231	Takifugu rubripes	88.27	0.00e+00	1018.00
IUUC-Tsy-119415	Tarsius syrichta	97.45	0.00e+00	1154.00
IUUC-Tni-120893	Tetraodon nigroviridis	87.50	0.00e+00	1011.00
IUUC-Tca-121703	Theobroma cacao	40.82	2.00e-125	442.00
IUUC-Tae-125317	Triticum aestivum	41.04	3.00e-130	458.00
IUUC-Tur-126557	Triticum urartu	40.57	8.00e-130	457.00
IUUC-Tbe-127253	Tupaia belangeri	69.32	0.00e+00	778.00
IUUC-Ttr-129100	Tursiops truncatus	95.93	0.00e+00	1112.00
IUUC-Vpa-130613	Vicugna pacos	91.19	0.00e+00	1068.00
IUUC-Vvi-130880	Vitis vinifera	41.00	2.00e-123	436.00
IUUC-Xtr-132033	Xenopus tropicalis	96.59	0.00e+00	1182.00
IUUC-Xma-133421	Xiphophorus maculatus	87.56	0.00e+00	1028.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence