iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109418

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein COP1-1

Genbank Nucleotide ID

GL377579

Gene Name

COP1-1; SELMODRAFT_171333

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_171333	EFJ28584	EFJ28584

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.70e-31	105.2	434	468
E3 activity/RING/U-box	7.80e-09	36.2	23	84

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           H+ + ++++f  +d t+lvsGsdDg++k+W +r+ 
   Q: 434  HERRAWSVDFsrTDpTMLVSGSDDGKVKLWCTRQE 468
           88999******9889***************98875 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliq 66
           ++f CpI  + M+d   +++G+++   +I  +l+++++ cP ++  lt+++l Pn  l ++ +
   Q: 23   KDFQCPICIQTMKDAFLTACGHSFCYMCIITHLNNKKN-CPCCGVYLTSSQLYPNFLLNKILK 84
           68***********************************9.****************99877655 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MSFSSEQQQQ QQQQQGPRLL ADKDFQCPIC IQTMKDAFLT ACGHSFCYMC IITHLNNKKN 60
CPCCGVYLTS SQLYPNFLLN KILKKVATSQ ISCASPTEQL RFALQQGVDV PLKEIDSLLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTTCT CGTCCGAGCA GCAACAGCAG CAACAGCAGC AGCAAGGGCC GCGGCTGTTG 60
GCGGATAAGG ATTTCCAGTG CCCGATTTGC ATCCAGACGA TGAAGGATGC GTTTCTCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_171333

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	60.60	0.00e+00	768.00
IUUC-Aml-001265	Ailuropoda melanoleuca	40.12	2.00e-125	442.00
IUUC-Atr-002460	Amborella trichopoda	65.20	0.00e+00	782.00
IUUC-Apl-003796	Anas platyrhynchos	40.36	5.00e-119	420.00
IUUC-Aca-005078	Anolis carolinensis	40.28	3.00e-124	438.00
IUUC-Aly-006014	Arabidopsis lyrata	62.70	0.00e+00	801.00
IUUC-Ath-007636	Arabidopsis thaliana	62.07	0.00e+00	797.00
IUUC-Bta-012595	Bos taurus	40.18	4.00e-126	444.00
IUUC-Bdi-014152	Brachypodium distachyon	60.44	0.00e+00	775.00
IUUC-Bol-016380	Brassica oleracea	62.44	0.00e+00	793.00
IUUC-Bra-017690	Brassica rapa	61.19	0.00e+00	772.00
IUUC-Cja-018926	Callithrix jacchus	40.18	5.00e-126	444.00
IUUC-Cfa-021088	Canis familiaris	40.18	6.00e-126	444.00
IUUC-Cpo-022442	Cavia porcellus	39.37	3.00e-119	421.00
IUUC-Csa-024119	Chlorocebus sabaeus	39.94	2.00e-125	442.00
IUUC-Cin-025375	Ciona intestinalis	38.16	3.00e-117	415.00
IUUC-Dre-028453	Danio rerio	41.19	3.00e-126	444.00
IUUC-Dno-029887	Dasypus novemcinctus	39.88	6.00e-126	444.00
IUUC-Ete-033016	Echinops telfairi	53.77	8.00e-95	340.00
IUUC-Eca-034403	Equus caballus	39.10	1.00e-117	416.00
IUUC-Eeu-034690	Erinaceus europaeus	53.74	4.00e-89	321.00
IUUC-Fca-036475	Felis catus	39.26	1.00e-118	419.00
IUUC-Fal-037189	Ficedula albicollis	40.90	8.00e-126	443.00
IUUC-Gga-040806	Gallus gallus	41.24	3.00e-127	448.00
IUUC-Gac-042177	Gasterosteus aculeatus	40.71	2.00e-125	442.00
IUUC-Gma-044187	Glycine max	62.34	0.00e+00	772.00
IUUC-Ggo-044430	Gorilla gorilla	35.87	3.00e-78	285.00
IUUC-Hsa-045853	Homo sapiens	40.03	1.00e-125	443.00
IUUC-Itr-048238	Ictidomys tridecemlineatus	54.15	5.00e-72	263.00
IUUC-Lch-050420	Latimeria chalumnae	40.93	2.00e-125	442.00
IUUC-Lpe-051219	Leersia perrieri	61.78	0.00e+00	783.00
IUUC-Loc-052728	Lepisosteus oculatus	40.49	2.00e-117	416.00
IUUC-Laf-053775	Loxodonta africana	40.56	6.00e-126	444.00
IUUC-Mtr-058555	Medicago truncatula	61.83	0.00e+00	795.00
IUUC-Mga-059646	Meleagris gallopavo	40.48	4.00e-120	424.00
IUUC-Mmr-060990	Microcebus murinus	39.97	3.00e-125	441.00
IUUC-Mdo-062287	Monodelphis domestica	40.03	3.00e-126	445.00
IUUC-Mmu-064097	Mus musculus	40.03	4.00e-126	444.00
IUUC-Mac-065240	Musa acuminata	62.52	0.00e+00	777.00
IUUC-Mpu-066612	Mustela putorius furo	39.42	8.00e-119	420.00
IUUC-Mlu-067967	Myotis lucifugus	39.14	7.00e-117	413.00
IUUC-Nle-069543	Nomascus leucogenys	40.18	4.00e-126	444.00
IUUC-Ont-071522	Oreochromis niloticus	40.81	2.00e-126	445.00
IUUC-Ocu-073756	Oryctolagus cuniculus	39.81	3.00e-121	427.00
IUUC-Oba-075149	Oryza barthii	62.09	0.00e+00	796.00
IUUC-Obr-076563	Oryza brachyantha	62.28	0.00e+00	800.00
IUUC-Ogl-077701	Oryza glaberrima	62.52	0.00e+00	803.00
IUUC-Ogu-078383	Oryza glumaepatula	62.52	0.00e+00	803.00
IUUC-Oin-079965	Oryza indica	58.58	0.00e+00	726.00
IUUC-Olo-080639	Oryza longistaminata	60.42	0.00e+00	786.00
IUUC-Ome-081821	Oryza meridionalis	61.68	0.00e+00	737.00
IUUC-Oni-082622	Oryza nivara	62.52	0.00e+00	803.00
IUUC-Opu-083295	Oryza punctata	62.36	0.00e+00	800.00
IUUC-Oru-084661	Oryza rufipogon	62.52	0.00e+00	803.00
IUUC-Osa-085766	Oryza sativa	62.52	0.00e+00	803.00
IUUC-Oga-088215	Otolemur garnettii	39.49	1.00e-120	426.00
IUUC-Oar-089880	Ovis aries	39.65	1.00e-120	426.00
IUUC-Ptr-090597	Pan troglodytes	40.03	1.00e-125	443.00
IUUC-Pan-091987	Papio anubis	40.03	4.00e-126	444.00
IUUC-Psi-094033	Pelodiscus sinensis	40.13	2.00e-121	429.00
IUUC-Pma-094587	Petromyzon marinus	40.35	4.00e-118	417.00
IUUC-Ppa-095401	Physcomitrella patens	68.04	0.00e+00	873.00
IUUC-Pfo-097388	Poecilia formosa	41.06	1.00e-125	442.00
IUUC-Pab-098029	Pongo abelii	40.18	8.00e-126	443.00
IUUC-Pop-099319	Populus trichocarpa	61.18	0.00e+00	786.00
IUUC-Ppe-101250	Prunus persica	59.46	0.00e+00	716.00
IUUC-Pva-102407	Pteropus vampyrus	39.88	2.00e-122	432.00
IUUC-Rno-105312	Rattus norvegicus	40.03	8.00e-127	446.00
IUUC-Sit-110248	Setaria italica	61.28	0.00e+00	782.00
IUUC-Sly-110895	Solanum lycopersicum	62.05	0.00e+00	806.00
IUUC-Stu-112882	Solanum tuberosum	62.48	0.00e+00	750.00
IUUC-Sar-113230	Sorex araneus	44.67	7.00e-72	264.00
IUUC-Sbi-113962	Sorghum bicolor	58.99	0.00e+00	760.00
IUUC-Ssc-115987	Sus scrofa	27.75	8.00e-24	103.00
IUUC-Tgu-116471	Taeniopygia guttata	40.87	2.00e-125	442.00
IUUC-Tru-118231	Takifugu rubripes	41.09	4.00e-122	431.00
IUUC-Tsy-119415	Tarsius syrichta	39.38	1.00e-118	419.00
IUUC-Tni-120893	Tetraodon nigroviridis	41.27	3.00e-122	431.00
IUUC-Tca-121619	Theobroma cacao	62.21	0.00e+00	797.00
IUUC-Tae-125317	Triticum aestivum	61.38	0.00e+00	796.00
IUUC-Tur-126557	Triticum urartu	61.72	0.00e+00	777.00
IUUC-Tbe-127253	Tupaia belangeri	44.92	2.00e-73	269.00
IUUC-Ttr-129100	Tursiops truncatus	39.69	5.00e-117	414.00
IUUC-Vpa-130613	Vicugna pacos	35.49	8.00e-101	360.00
IUUC-Vvi-130880	Vitis vinifera	63.98	0.00e+00	758.00
IUUC-Xtr-132033	Xenopus tropicalis	40.47	3.00e-130	457.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence