iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000003287.6	ENSRNOT00000091100.1	ENSRNOP00000069928.1
ENSRNOG00000003287.6	ENSRNOT00000004390.6	ENSRNOP00000004390.6

Annotation

DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-26	91.7	498	535

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllks 38
           gH++ +tcl++   ++lvsG+ Dg++k WD+ tg++lk+
   Q: 498  GHQGTITCLDLyK-NRLVSGAKDGQVKEWDIETGKCLKT 535
           8*********953.79********************986 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MENTEQKLRQ SPYFCCEKGS NWVPVCHKCE ACVLAWKIFA TKEWFRRVND TSQRRFLVSI 60
LVQLNSLYLL QYFQNILETT QGKDFIYNRS RIKLNRKGGK EEEVVKSSLN QMLDKTVESK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAAACA CGGAACAAAA ACTCAGGCAG AGCCCCTATT TTTGTTGTGA AAAGGGATCC 60
AACTGGGTCC CCGTGTGCCA TAAGTGTGAA GCCTGTGTCT TAGCGTGGAA GATCTTTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003572	Anas platyrhynchos	48.71	5.00e-120	425.00
IUUC-Aca-004297	Anolis carolinensis	43.68	3.00e-152	533.00
IUUC-Ame-011058	Astyanax mexicanus	38.59	6.00e-127	448.00
IUUC-Bta-012667	Bos taurus	64.90	1.00e-179	624.00
IUUC-Cja-019163	Callithrix jacchus	61.17	0.00e+00	1260.00
IUUC-Cfa-020784	Canis familiaris	64.39	0.00e+00	1335.00
IUUC-Cpo-021429	Cavia porcellus	65.78	0.00e+00	638.00
IUUC-Csa-023597	Chlorocebus sabaeus	68.93	0.00e+00	971.00
IUUC-Cho-024559	Choloepus hoffmanni	57.59	7.00e-169	587.00
IUUC-Dre-027496	Danio rerio	45.22	2.00e-102	366.00
IUUC-Dno-028995	Dasypus novemcinctus	61.90	0.00e+00	1272.00
IUUC-Ete-032823	Echinops telfairi	59.38	2.00e-76	281.00
IUUC-Eca-033666	Equus caballus	61.25	0.00e+00	1051.00
IUUC-Eeu-035054	Erinaceus europaeus	63.60	8.00e-82	298.00
IUUC-Fca-035589	Felis catus	60.98	0.00e+00	1240.00
IUUC-Fal-037403	Ficedula albicollis	36.76	5.00e-133	468.00
IUUC-Gmo-038669	Gadus morhua	30.06	1.00e-64	240.00
IUUC-Gga-041227	Gallus gallus	47.18	5.00e-118	418.00
IUUC-Hsa-046221	Homo sapiens	63.25	0.00e+00	1334.00
IUUC-Itr-049011	Ictidomys tridecemlineatus	62.91	0.00e+00	1303.00
IUUC-Lch-050046	Latimeria chalumnae	33.86	1.00e-157	551.00
IUUC-Loc-052366	Lepisosteus oculatus	41.70	6.00e-141	494.00
IUUC-Laf-053745	Loxodonta africana	61.94	0.00e+00	1313.00
IUUC-Mcc-054826	Macaca mulatta	63.69	0.00e+00	1329.00
IUUC-Meu-056636	Macropus eugenii	43.22	9.00e-47	182.00
IUUC-Mga-060185	Meleagris gallopavo	47.42	2.00e-118	420.00
IUUC-Mdo-062382	Monodelphis domestica	44.56	0.00e+00	804.00
IUUC-Mmu-063623	Mus musculus	81.74	0.00e+00	1670.00
IUUC-Mpu-066872	Mustela putorius furo	64.75	0.00e+00	720.00
IUUC-Nle-069247	Nomascus leucogenys	65.11	0.00e+00	994.00
IUUC-Opr-070455	Ochotona princeps	67.26	0.00e+00	636.00
IUUC-Ont-071926	Oreochromis niloticus	40.66	2.00e-85	310.00
IUUC-Oan-073411	Ornithorhynchus anatinus	39.35	0.00e+00	680.00
IUUC-Ocu-073893	Oryctolagus cuniculus	63.45	0.00e+00	1085.00
IUUC-Oga-087937	Otolemur garnettii	67.18	0.00e+00	640.00
IUUC-Oar-089680	Ovis aries	60.19	0.00e+00	1252.00
IUUC-Ptr-091549	Pan troglodytes	59.68	0.00e+00	1228.00
IUUC-Pan-091904	Papio anubis	64.46	0.00e+00	1325.00
IUUC-Psi-093181	Pelodiscus sinensis	40.08	0.00e+00	743.00
IUUC-Pma-094711	Petromyzon marinus	41.91	2.00e-68	252.00
IUUC-Pab-098067	Pongo abelii	63.25	0.00e+00	1338.00
IUUC-Pca-100867	Procavia capensis	61.36	0.00e+00	689.00
IUUC-Pva-102209	Pteropus vampyrus	68.66	0.00e+00	986.00
IUUC-Sha-107459	Sarcophilus harrisii	63.36	3.00e-49	189.00
IUUC-Tgu-117261	Taeniopygia guttata	41.47	1.00e-92	333.00
IUUC-Tru-117705	Takifugu rubripes	47.17	2.00e-41	161.00
IUUC-Tni-120365	Tetraodon nigroviridis	48.82	2.00e-41	162.00
IUUC-Tbe-128015	Tupaia belangeri	65.01	0.00e+00	924.00
IUUC-Ttr-128654	Tursiops truncatus	63.48	0.00e+00	918.00
IUUC-Vpa-130176	Vicugna pacos	58.69	0.00e+00	794.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence