iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114838

Ensembl Protein ID

Sb04g027780.1

UniProt Accession

C5XYQ0; C5XYQ0_SORBI

Genbank Protein ID

EES07241.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G234900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g027780	Sb04g027780.1	Sb04g027780.1
Sb04g027780	Sb04g027780.2	Sb04g027780.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	4.60e-10	40.0	8	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgs.eltlkvnpsdtVaeLKeki.....ekk.lgip.peqqrLiykGkiLeddktLadyglk 62
           ++v+++  dg+ +++ k++ps+tV+ LKe i     ++k      +++ +Li++G+iLe+++tLa+  ++
   Q: 8    IEVRFRLFDGTdIGPTKYDPSTTVSSLKEFIlarwpQDKdVAPKtVNDLKLINAGRILENNRTLAESRVP 77
           57899999****************************999899999********************98876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAGGKEPIEV RFRLFDGTDI GPTKYDPSTT VSSLKEFILA RWPQDKDVAP KTVNDLKLIN 60
AGRILENNRT LAESRVPVGE VPGGVITMHV VVRPPQADKN SEKQLANSPK QNRCGCTIL 119

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACGCACCGA GAGGAGGAAG CCCACTACCG CGTCTCTCTC TCTCTCCTCC GGCTCTCGTC 60
TTCCTCTCCT CCCCCACCGA GTCGCCGCCC CCTCGCTTTC ACCCAACGCG GAAGCAAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017000--MUB
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Gene Ontology

GO:0005737--C:cytoplasm
GO:0046914--F:transition metal ion binding
GO:0046916--P:cellular transition metal ion homeostasis
GO:0030001--P:metal ion transport

KEGG

sbi:SORBI_04g027750

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002026	Ailuropoda melanoleuca	29.13	2.00e-06	43.10
IUUC-Atr-002633	Amborella trichopoda	57.26	4.00e-39	152.00
IUUC-Apl-003995	Anas platyrhynchos	28.16	4.00e-06	42.40
IUUC-Aca-004268	Anolis carolinensis	27.08	4.00e-06	42.40
IUUC-Aly-005562	Arabidopsis lyrata	68.07	2.00e-44	169.00
IUUC-Ath-006977	Arabidopsis thaliana	65.55	2.00e-43	166.00
IUUC-Bta-012365	Bos taurus	29.13	2.00e-06	43.10
IUUC-Bdi-014354	Brachypodium distachyon	93.28	8.00e-64	234.00
IUUC-Bol-016062	Brassica oleracea	67.52	6.00e-44	167.00
IUUC-Bra-017418	Brassica rapa	67.52	8.00e-44	167.00
IUUC-Cel-018463	Caenorhabditis elegans	24.56	1.00e-05	41.20
IUUC-Cja-019729	Callithrix jacchus	29.13	2.00e-06	43.10
IUUC-Cfa-020662	Canis familiaris	28.12	2.00e-06	43.50
IUUC-Cpo-022324	Cavia porcellus	29.17	8.00e-07	44.70
IUUC-Cre-022606	Chlamydomonas reinhardtii	34.17	9.00e-14	67.80
IUUC-Csa-024065	Chlorocebus sabaeus	28.12	2.00e-06	43.10
IUUC-Cho-025062	Choloepus hoffmanni	33.33	5.00e-04	35.40
IUUC-Cin-025171	Ciona intestinalis	28.40	4.00e-04	35.40
IUUC-Cne-026899	Cryptococcus neoformans	38.64	6.00e-04	35.80
IUUC-Dre-027757	Danio rerio	27.55	6.00e-06	42.00
IUUC-Dno-029261	Dasypus novemcinctus	28.12	2.00e-06	43.10
IUUC-Dor-030666	Dipodomys ordii	29.13	2.00e-06	43.10
IUUC-Dme-031839	Drosophila melanogaster	31.37	1.00e-04	40.00
IUUC-Eca-034040	Equus caballus	28.12	2.00e-06	43.10
IUUC-Fca-036059	Felis catus	28.12	2.00e-06	43.10
IUUC-Fal-037503	Ficedula albicollis	27.08	5.00e-06	42.00
IUUC-Gmo-038922	Gadus morhua	27.55	3.00e-06	43.10
IUUC-Gga-040538	Gallus gallus	27.08	4.00e-06	42.40
IUUC-Gac-041706	Gasterosteus aculeatus	26.04	3.00e-05	40.00
IUUC-Ggo-045231	Gorilla gorilla	29.13	2.00e-06	43.50
IUUC-Hsa-046393	Homo sapiens	28.12	2.00e-06	43.10
IUUC-Itr-048625	Ictidomys tridecemlineatus	28.12	2.00e-06	43.10
IUUC-Lch-050196	Latimeria chalumnae	27.08	7.00e-07	45.10
IUUC-Lpe-051406	Leersia perrieri	93.07	7.00e-53	197.00
IUUC-Loc-051941	Lepisosteus oculatus	27.08	5.00e-06	42.40
IUUC-Laf-054253	Loxodonta africana	29.13	2.00e-06	43.10
IUUC-Mcc-055067	Macaca mulatta	29.13	2.00e-06	43.10
IUUC-Mtr-057898	Medicago truncatula	56.14	7.00e-38	147.00
IUUC-Mga-059213	Meleagris gallopavo	28.16	5.00e-06	42.40
IUUC-Mmr-061517	Microcebus murinus	27.97	3.00e-07	46.20
IUUC-Mdo-062989	Monodelphis domestica	27.08	5.00e-06	42.00
IUUC-Mmu-064126	Mus musculus	28.12	2.00e-06	43.10
IUUC-Mac-065001	Musa acuminata	81.25	1.00e-52	197.00
IUUC-Mpu-066562	Mustela putorius furo	28.12	2.00e-06	43.10
IUUC-Mlu-067004	Myotis lucifugus	28.12	2.00e-06	43.10
IUUC-Nle-069066	Nomascus leucogenys	28.12	2.00e-06	43.10
IUUC-Opr-071116	Ochotona princeps	29.11	2.00e-05	39.70
IUUC-Ont-071818	Oreochromis niloticus	27.35	3.00e-06	42.70
IUUC-Oan-072889	Ornithorhynchus anatinus	28.16	4.00e-06	42.40
IUUC-Ocu-074206	Oryctolagus cuniculus	28.12	2.00e-06	43.10
IUUC-Oba-075711	Oryza barthii	77.08	8.00e-59	221.00
IUUC-Obr-076210	Oryza brachyantha	94.12	5.00e-64	236.00
IUUC-Ogu-078501	Oryza glumaepatula	94.12	2.00e-63	236.00
IUUC-Oin-079722	Oryza indica	94.12	2.00e-64	236.00
IUUC-Olo-081013	Oryza longistaminata	65.32	1.00e-38	153.00
IUUC-Ome-081806	Oryza meridionalis	89.52	8.00e-52	197.00
IUUC-Oni-082423	Oryza nivara	94.12	2.00e-63	236.00
IUUC-Opu-083401	Oryza punctata	93.07	2.00e-52	198.00
IUUC-Oru-085116	Oryza rufipogon	94.12	2.00e-63	236.00
IUUC-Osa-085838	Oryza sativa	94.12	2.00e-64	236.00
IUUC-Ola-086589	Oryzias latipes	27.55	6.00e-06	41.60
IUUC-Oga-088252	Otolemur garnettii	28.12	2.00e-06	43.10
IUUC-Oar-090105	Ovis aries	28.70	2.00e-06	43.10
IUUC-Ptr-090930	Pan troglodytes	28.12	2.00e-06	43.10
IUUC-Pan-092513	Papio anubis	28.12	2.00e-06	43.10
IUUC-Psi-093975	Pelodiscus sinensis	27.08	5.00e-06	42.00
IUUC-Pma-094235	Petromyzon marinus	29.49	1.00e-04	37.00
IUUC-Ppa-095460	Physcomitrella patens	64.35	4.00e-41	158.00
IUUC-Pfo-096254	Poecilia formosa	27.35	2.00e-06	43.50
IUUC-Pab-098193	Pongo abelii	28.12	2.00e-06	43.10
IUUC-Pca-100660	Procavia capensis	29.13	2.00e-06	43.50
IUUC-Ppe-101396	Prunus persica	69.75	4.00e-47	178.00
IUUC-Pva-102940	Pteropus vampyrus	28.12	2.00e-06	43.10
IUUC-Rno-105072	Rattus norvegicus	28.12	2.00e-06	43.10
IUUC-Sha-106727	Sarcophilus harrisii	27.08	5.00e-06	42.00
IUUC-Smo-109335	Selaginella moellendorffii	65.25	3.00e-46	175.00
IUUC-Sit-110538	Setaria italica	98.32	8.00e-67	244.00
IUUC-Sly-111397	Solanum lycopersicum	67.83	3.00e-42	162.00
IUUC-Stu-112320	Solanum tuberosum	67.83	5.00e-43	164.00
IUUC-Sar-113747	Sorex araneus	27.55	7.00e-06	41.60
IUUC-Ssc-115456	Sus scrofa	28.12	2.00e-06	43.50
IUUC-Tgu-117007	Taeniopygia guttata	28.16	4.00e-06	42.40
IUUC-Tru-118070	Takifugu rubripes	27.55	8.00e-06	41.20
IUUC-Tsy-119287	Tarsius syrichta	29.49	4.00e-04	35.80
IUUC-Tni-120428	Tetraodon nigroviridis	27.55	1.00e-05	40.80
IUUC-Tca-121258	Theobroma cacao	69.23	1.00e-46	177.00
IUUC-Tur-126595	Triticum urartu	78.07	4.00e-50	189.00
IUUC-Tbe-127437	Tupaia belangeri	30.77	2.00e-04	36.60
IUUC-Ttr-128237	Tursiops truncatus	29.13	2.00e-06	43.10
IUUC-Vda-129896	Verticillium dahliae	31.34	1.00e-04	37.00
IUUC-Vpa-130387	Vicugna pacos	29.13	2.00e-06	43.10
IUUC-Vvi-131568	Vitis vinifera	71.79	3.00e-48	182.00
IUUC-Xtr-132749	Xenopus tropicalis	28.12	1.00e-06	43.90
IUUC-Xma-134295	Xiphophorus maculatus	26.96	4.00e-06	42.40
IUUC-Zma-134950	Zea mays	98.02	3.00e-55	205.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence