iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114148

Ensembl Protein ID

Sb04g034790.1

UniProt Accession

C5XTK4; C5XTK4_SORBI

Genbank Protein ID

EES07626.1

Protein Name

Ubiquitin-like protein ATG12

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G316900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g034790	Sb04g034790.1	Sb04g034790.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UBL/ATG12	36.56	1.00e-14	75.90	IUUC-Hsa-046903

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Functional Description
(View)

Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.

Protein Sequence
(Fasta)

MAAEVDQKVV VHVRSTGDAP ILKQSKFKIS GRDKFLKVIE FLRRQLHQDT LFVYINSAFS 60
PNPDELVIDL YNNFGIDGKL VVNYALSAAW G 91

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCGG AGGTGGATCA GAAAGGTCCG CGCAAACTTC TGCTACCCGT TCTATATGCC 60
TTGTTAGTTG TTATCCTTTT CCTCCCCTTG TCCTCTGTCG TTTGCTGACC TCTATACTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR007242--Atg12
IPR029071--Ubiquitin-rel_dom

Pfam

PF04110--APG12

Gene Ontology

GO:0034274--C:Atg12-Atg5-Atg16 complex
GO:0034045--C:pre-autophagosomal structure membrane
GO:0019776--F:Atg8 ligase activity
GO:0000045--P:autophagosome assembly
GO:0006501--P:C-terminal protein lipidation
GO:0000422--P:mitophagy
GO:0044804--P:nucleophagy

KEGG

sbi:SORBI_04g034790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001177	Aegilops tauschii	86.67	2.00e-44	169.00
IUUC-Aml-002116	Ailuropoda melanoleuca	37.63	7.00e-16	75.90
IUUC-Atr-002615	Amborella trichopoda	77.66	1.00e-39	153.00
IUUC-Apl-003753	Anas platyrhynchos	52.50	1.00e-09	53.50
IUUC-Aca-005231	Anolis carolinensis	37.23	2.00e-13	67.40
IUUC-Aly-006172	Arabidopsis lyrata	81.18	5.00e-38	147.00
IUUC-Ath-006953	Arabidopsis thaliana	81.18	4.00e-39	151.00
IUUC-Ago-007970	Ashbya gossypii	32.14	2.00e-05	41.20
IUUC-Acl-008072	Aspergillus clavatus	42.53	2.00e-15	72.80
IUUC-Afl-008725	Aspergillus flavus	42.55	2.00e-15	74.30
IUUC-Afu-008967	Aspergillus fumigatus	42.53	2.00e-14	71.20
IUUC-Ani-009248	Aspergillus nidulans	41.38	6.00e-14	69.30
IUUC-Ang-009684	Aspergillus niger	41.86	6.00e-14	69.30
IUUC-Aor-009947	Aspergillus oryzae	42.55	2.00e-15	74.30
IUUC-Ame-011656	Astyanax mexicanus	38.04	8.00e-15	71.20
IUUC-Bgr-012174	Blumeria graminis	40.22	1.00e-13	67.80
IUUC-Bta-012483	Bos taurus	35.87	1.00e-15	73.90
IUUC-Bci-013755	Botrytis cinerea	34.38	1.00e-10	57.40
IUUC-Bdi-014156	Brachypodium distachyon	91.11	5.00e-46	174.00
IUUC-Bol-015683	Brassica oleracea	80.00	3.00e-37	145.00
IUUC-Bra-016802	Brassica rapa	81.18	2.00e-38	148.00
IUUC-Cel-018242	Caenorhabditis elegans	30.77	3.00e-08	49.30
IUUC-Cja-019514	Callithrix jacchus	36.56	1.00e-15	75.50
IUUC-Cfa-020748	Canis familiaris	37.63	5.00e-16	75.90
IUUC-Cpo-021965	Cavia porcellus	37.63	6.00e-16	75.90
IUUC-Cre-023009	Chlamydomonas reinhardtii	50.55	2.00e-21	92.40
IUUC-Csa-023494	Chlorocebus sabaeus	36.56	5.00e-16	75.90
IUUC-Cho-024631	Choloepus hoffmanni	35.87	4.00e-15	73.60
IUUC-Cin-025609	Ciona intestinalis	45.98	2.00e-17	79.30
IUUC-Cgl-026722	Colletotrichum gloeosporioides	38.46	5.00e-13	66.20
IUUC-Dre-027479	Danio rerio	36.56	2.00e-15	73.20
IUUC-Dno-029693	Dasypus novemcinctus	31.58	2.00e-11	60.50
IUUC-Dse-031440	Dothistroma septosporum	38.30	1.00e-14	70.90
IUUC-Dme-031892	Drosophila melanogaster	31.03	7.00e-12	61.20
IUUC-Ete-032550	Echinops telfairi	39.02	9.00e-15	71.20
IUUC-Eca-033553	Equus caballus	36.56	4.00e-16	75.90
IUUC-Fca-036524	Felis catus	36.96	1.00e-15	75.10
IUUC-Fal-036942	Ficedula albicollis	35.71	1.00e-14	69.70
IUUC-Fox-037753	Fusarium oxysporum	43.18	1.00e-14	71.60
IUUC-Gmo-039498	Gadus morhua	39.77	2.00e-14	70.10
IUUC-Ggr-039852	Gaeumannomyces graminis	40.45	2.00e-11	61.60
IUUC-Gga-041263	Gallus gallus	36.56	1.00e-15	74.70
IUUC-Gac-042346	Gasterosteus aculeatus	40.48	1.00e-14	70.90
IUUC-Gma-042896	Glycine max	83.53	3.00e-40	154.00
IUUC-Ggo-045601	Gorilla gorilla	36.56	8.00e-16	75.90
IUUC-Hsa-046903	Homo sapiens	36.56	4.00e-16	75.90
IUUC-Hvu-047239	Hordeum vulgare	87.78	1.00e-44	169.00
IUUC-Itr-048445	Ictidomys tridecemlineatus	35.48	2.00e-15	74.30
IUUC-Kpa-049355	Komagataella pastoris	32.29	2.00e-10	57.00
IUUC-Lch-050619	Latimeria chalumnae	38.64	5.00e-16	75.90
IUUC-Loc-052102	Lepisosteus oculatus	38.46	1.10e-02	30.00
IUUC-Lma-053299	Leptosphaeria maculans	32.88	5.00e-08	48.90
IUUC-Laf-054205	Loxodonta africana	35.48	2.00e-15	73.90
IUUC-Meu-056804	Macropus eugenii	36.96	1.00e-15	74.30
IUUC-Mor-057052	Magnaporthe oryzae	40.22	5.00e-13	66.20
IUUC-Mtr-057961	Medicago truncatula	83.53	2.00e-40	155.00
IUUC-Mla-059045	Melampsora laricipopulina	50.00	9.00e-23	97.40
IUUC-Mvi-060360	Microbotryum violaceum	54.02	2.00e-23	100.00
IUUC-Mmr-061654	Microcebus murinus	36.56	4.00e-16	75.90
IUUC-Mdo-062649	Monodelphis domestica	35.87	2.00e-15	73.90
IUUC-Mmu-064105	Mus musculus	35.87	2.00e-15	73.90
IUUC-Mac-065532	Musa acuminata	84.04	2.00e-42	162.00
IUUC-Mpu-066269	Mustela putorius furo	37.63	4.00e-16	76.30
IUUC-Mlu-067631	Myotis lucifugus	36.56	1.00e-15	75.10
IUUC-Nfi-068468	Neosartorya fischeri	42.53	5.00e-15	71.60
IUUC-Ncr-068750	Neurospora crassa	32.58	2.00e-10	57.40
IUUC-Nle-069483	Nomascus leucogenys	36.56	9.00e-16	75.50
IUUC-Opr-070936	Ochotona princeps	35.87	4.00e-15	73.60
IUUC-Obr-076322	Oryza brachyantha	78.02	3.00e-40	154.00
IUUC-Ogl-077226	Oryza glaberrima	80.00	1.00e-36	143.00
IUUC-Oin-079220	Oryza indica	59.57	3.00e-28	115.00
IUUC-Olo-080688	Oryza longistaminata	80.00	1.00e-36	143.00
IUUC-Ome-081265	Oryza meridionalis	80.00	1.00e-36	143.00
IUUC-Oru-084342	Oryza rufipogon	79.07	1.00e-38	152.00
IUUC-Osa-086212	Oryza sativa	80.00	1.00e-36	143.00
IUUC-Ola-087277	Oryzias latipes	38.64	1.00e-14	70.50
IUUC-Olu-087780	Ostreococcus lucimarinus	35.96	5.00e-13	64.70
IUUC-Oga-088175	Otolemur garnettii	36.56	4.00e-16	75.90
IUUC-Oar-089477	Ovis aries	35.87	3.00e-15	73.60
IUUC-Ptr-091129	Pan troglodytes	36.56	8.00e-16	75.90
IUUC-Psi-093351	Pelodiscus sinensis	36.56	1.00e-15	74.70
IUUC-Pno-094948	Phaeosphaeria nodorum	36.23	8.00e-08	48.50
IUUC-Ppa-095788	Physcomitrella patens	74.12	5.00e-35	137.00
IUUC-Pfo-096993	Poecilia formosa	35.48	2.00e-13	67.00
IUUC-Pab-098502	Pongo abelii	36.56	8.00e-16	75.90
IUUC-Pop-098819	Populus trichocarpa	72.94	2.00e-36	142.00
IUUC-Pca-100144	Procavia capensis	25.81	3.00e-05	40.80
IUUC-Ppe-101560	Prunus persica	86.59	2.00e-39	152.00
IUUC-Pva-102810	Pteropus vampyrus	29.73	2.00e-07	47.80
IUUC-Pgr-103531	Puccinia graminis	52.27	3.00e-23	99.00
IUUC-Ptt-103753	Puccinia triticina	52.27	5.00e-23	98.60
IUUC-Pyt-104733	Pyrenophora triticirepentis	38.37	1.00e-12	64.30
IUUC-Rno-106072	Rattus norvegicus	38.04	2.00e-16	77.00
IUUC-Sce-106275	Saccharomyces cerevisiae	36.47	9.00e-12	62.40
IUUC-Sha-107554	Sarcophilus harrisii	36.96	1.00e-15	74.30
IUUC-Sja-107682	Schizosaccharomyces japonicus	35.96	5.00e-14	68.90
IUUC-Spo-108275	Schizosaccharomyces pombe	37.08	6.00e-17	78.60
IUUC-Smo-109151	Selaginella moellendorffii	59.04	1.00e-24	102.00
IUUC-Sit-110270	Setaria italica	100.00	3.00e-50	187.00
IUUC-Sly-111862	Solanum lycopersicum	80.22	6.00e-41	157.00
IUUC-Stu-112663	Solanum tuberosum	72.73	2.00e-18	83.20
IUUC-Sre-115216	Sporisorium reilianum	47.13	7.00e-21	91.70
IUUC-Ssc-116051	Sus scrofa	36.56	5.00e-16	75.90
IUUC-Tru-118466	Takifugu rubripes	40.24	2.00e-14	69.30
IUUC-Tsy-119334	Tarsius syrichta	36.56	6.00e-12	62.80
IUUC-Tni-119792	Tetraodon nigroviridis	40.24	8.00e-15	70.50
IUUC-Tca-121861	Theobroma cacao	80.85	5.00e-41	158.00
IUUC-Tvi-122499	Trichoderma virens	43.18	8.00e-15	71.60
IUUC-Tae-123431	Triticum aestivum	86.67	2.00e-44	169.00
IUUC-Tme-126934	Tuber melanosporum	35.63	3.00e-12	63.50
IUUC-Ttr-129001	Tursiops truncatus	34.78	2.00e-12	64.30
IUUC-Uma-129324	Ustilago maydis	48.28	2.00e-21	93.20
IUUC-Vda-129846	Verticillium dahliae	40.00	2.00e-14	70.50
IUUC-Vpa-130202	Vicugna pacos	55.00	3.00e-10	57.00
IUUC-Vvi-131474	Vitis vinifera	80.52	5.00e-32	129.00
IUUC-Xtr-132782	Xenopus tropicalis	38.04	6.00e-16	75.50
IUUC-Xma-134140	Xiphophorus maculatus	36.56	4.00e-14	69.30
IUUC-Yli-134517	Yarrowia lipolytica	42.50	3.00e-12	63.90
IUUC-Zma-134764	Zea mays	98.90	9.00e-50	186.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence