iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116070

Ensembl Protein ID

ENSSSCP00000001640.1

UniProt Accession

F1RZR7; F1RZR7_PIG

Genbank Protein ID

ENSSSCP00000001640

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU498854

Gene Name

PHF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000001511.1	ENSSSCT00000001684.1	ENSSSCP00000001640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.80e-10	39.7	89	140

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedek.slveCekCrewfHpaClklsveeelpnsek.wiCpkCr 52
            C vC++++      lv CekCr+++H++C+ + +  + +++ + w C++C 
   Q: 89   LCCVCRSETVVPGnRLVSCEKCRHAYHQDCHVPRAPAPGEGEGTpWVCRQCV 140
           588***999876459*******************66666655558******7 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAQPPRLSRS AAPPLWDPAS SASTSGPRPR LWEGQDVLAR WTDGLLYLGT IKKVDSAREV 60
CLVQFEDDSQ FLVLWKDISP AALPGEELLC CVCRSETVVP GNRLVSCEKC RHAYHQDCHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCCCCCCG CCGCCTCCTC CTGCCGCTGC CGCTGCTTTG GCTGCTGCGT CATACGCCCC 60
AGAGCTGCCG GGACGGAGGG GCTGGGCCTG GGGACCCCCG GGTCGCTGCC TGCACGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025894--Mtf2_C_dom
IPR031202--PHF1
IPR002999--Tudor
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF14061--Mtf2_C
PF00628--PHD

SMART

SM00249--PHD
SM00333--TUDOR

Gene Ontology

GO:0035098--C:ESC/E(Z) complex
GO:0035861--C:site of double-strand break
GO:0008270--F:zinc ion binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0061086--P:negative regulation of histone H3-K27 methylation
GO:0061087--P:positive regulation of histone H3-K27 methylation

KEGG

ssc:100153414

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001720	Ailuropoda melanoleuca	96.47	0.00e+00	918.00
IUUC-Ame-011369	Astyanax mexicanus	48.24	5.00e-128	451.00
IUUC-Bta-012536	Bos taurus	95.94	0.00e+00	882.00
IUUC-Cja-019049	Callithrix jacchus	95.41	0.00e+00	903.00
IUUC-Cfa-021211	Canis familiaris	95.77	0.00e+00	914.00
IUUC-Cpo-021980	Cavia porcellus	93.85	0.00e+00	901.00
IUUC-Csa-023154	Chlorocebus sabaeus	95.06	0.00e+00	926.00
IUUC-Cho-025018	Choloepus hoffmanni	42.59	7.00e-09	55.10
IUUC-Dre-028597	Danio rerio	48.07	1.00e-131	462.00
IUUC-Dor-030431	Dipodomys ordii	94.01	0.00e+00	868.00
IUUC-Ete-032589	Echinops telfairi	88.13	0.00e+00	898.00
IUUC-Eca-034315	Equus caballus	96.47	0.00e+00	947.00
IUUC-Gmo-039382	Gadus morhua	65.27	2.00e-118	418.00
IUUC-Gac-041748	Gasterosteus aculeatus	65.81	3.00e-120	424.00
IUUC-Ggo-044966	Gorilla gorilla	95.77	0.00e+00	923.00
IUUC-Hsa-046188	Homo sapiens	95.41	0.00e+00	890.00
IUUC-Itr-048249	Ictidomys tridecemlineatus	94.89	0.00e+00	907.00
IUUC-Lch-050336	Latimeria chalumnae	52.74	2.00e-149	521.00
IUUC-Laf-053729	Loxodonta africana	91.08	0.00e+00	851.00
IUUC-Mcc-055486	Macaca mulatta	95.06	0.00e+00	926.00
IUUC-Meu-055933	Macropus eugenii	93.46	0.00e+00	685.00
IUUC-Mmr-061114	Microcebus murinus	94.19	0.00e+00	918.00
IUUC-Mdo-062033	Monodelphis domestica	91.28	0.00e+00	671.00
IUUC-Mmu-063482	Mus musculus	89.59	0.00e+00	923.00
IUUC-Mpu-065725	Mustela putorius furo	96.12	0.00e+00	927.00
IUUC-Mlu-067243	Myotis lucifugus	93.47	0.00e+00	913.00
IUUC-Nle-069759	Nomascus leucogenys	95.24	0.00e+00	899.00
IUUC-Opr-070713	Ochotona princeps	42.59	7.00e-09	55.10
IUUC-Ont-071655	Oreochromis niloticus	52.75	4.00e-124	438.00
IUUC-Ocu-073930	Oryctolagus cuniculus	96.12	0.00e+00	904.00
IUUC-Oga-088161	Otolemur garnettii	93.83	0.00e+00	913.00
IUUC-Oar-089582	Ovis aries	95.60	0.00e+00	875.00
IUUC-Ptr-090810	Pan troglodytes	95.41	0.00e+00	938.00
IUUC-Pan-091980	Papio anubis	95.06	0.00e+00	926.00
IUUC-Pfo-097260	Poecilia formosa	61.02	9.00e-123	432.00
IUUC-Pab-098556	Pongo abelii	95.77	0.00e+00	905.00
IUUC-Pca-100360	Procavia capensis	95.41	0.00e+00	832.00
IUUC-Pva-102900	Pteropus vampyrus	95.23	0.00e+00	901.00
IUUC-Rno-105536	Rattus norvegicus	91.53	0.00e+00	912.00
IUUC-Sha-107357	Sarcophilus harrisii	85.11	0.00e+00	834.00
IUUC-Tsy-119247	Tarsius syrichta	97.14	2.00e-180	625.00
IUUC-Tbe-127780	Tupaia belangeri	89.42	0.00e+00	828.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence