iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116025

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 39

Genbank Nucleotide ID

CU498826

Gene Name

TRIM39

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000001342.3	ENSSSCT00000035776.1	ENSSSCP00000030828.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.30e-08	34.2	29	70
E3 activity/RING/U-box	8.00e-08	32.5	27	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle +k+ p++  CgH f++ C+ +w        + f CP+Cr
   Q: 29   CSVCLEYLKE-PVIIECGHNFCKACITRW---WEDLERDFPCPVCR 70
           ********99.999************999...666889999****8 PP

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltlrrl 64
             C++ le  ++Pv++++G+ + +++I +w ++ ++   cPv+r++ + ++l Pn  l ++
   Q: 27   ASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERdfPCPVCRKTSRYRSLRPNRQLGSM 87
           68*****************************88887799****************998666 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAETSLLEAG ASAASTAAAL ENLQVEASCS VCLEYLKEPV IIECGHNFCK ACITRWWEDL 60
ERDFPCPVCR KTSRYRSLRP NRQLGSMVEI AKQLQAVKRK IRDESLCPQH HEALSLFCYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTTTTCCC AGAGGATTCC TCGGATCACC TGGACGACCG CATTTCAGCT ACCTGTCCCT 60
CCGGGTCCCT TCTCGCCCTT GACTCCTCCT GCTGGTTCTC ACCTCCATCC CCCAGCCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005829--C:cytosol
GO:0005739--C:mitochondrion
GO:0008270--F:zinc ion binding
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:2001235--P:positive regulation of apoptotic signaling pathway

KEGG

ssc:100151742

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001603	Ailuropoda melanoleuca	99.39	0.00e+00	965.00
IUUC-Apl-003354	Anas platyrhynchos	43.36	5.00e-109	387.00
IUUC-Aca-005381	Anolis carolinensis	71.17	0.00e+00	685.00
IUUC-Bta-012554	Bos taurus	98.58	1.00e-160	559.00
IUUC-Cja-019323	Callithrix jacchus	99.57	0.00e+00	942.00
IUUC-Cfa-020342	Canis familiaris	99.57	0.00e+00	963.00
IUUC-Cpo-022084	Cavia porcellus	97.16	9.00e-158	549.00
IUUC-Csa-023186	Chlorocebus sabaeus	99.79	0.00e+00	966.00
IUUC-Cho-024697	Choloepus hoffmanni	87.04	0.00e+00	858.00
IUUC-Dor-031021	Dipodomys ordii	87.82	5.00e-146	510.00
IUUC-Ete-032936	Echinops telfairi	86.89	1.00e-153	535.00
IUUC-Eca-033687	Equus caballus	98.94	2.00e-161	561.00
IUUC-Eeu-034957	Erinaceus europaeus	99.55	5.00e-132	464.00
IUUC-Fca-035406	Felis catus	99.36	0.00e+00	962.00
IUUC-Fal-036705	Ficedula albicollis	46.49	8.00e-100	357.00
IUUC-Gmo-038505	Gadus morhua	35.21	2.00e-72	266.00
IUUC-Gga-040382	Gallus gallus	45.96	5.00e-110	391.00
IUUC-Gac-041919	Gasterosteus aculeatus	36.40	1.00e-72	266.00
IUUC-Ggo-044526	Gorilla gorilla	93.76	0.00e+00	947.00
IUUC-Hsa-045719	Homo sapiens	93.76	0.00e+00	947.00
IUUC-Itr-048404	Ictidomys tridecemlineatus	97.89	0.00e+00	952.00
IUUC-Lch-049668	Latimeria chalumnae	40.58	7.00e-90	324.00
IUUC-Loc-052206	Lepisosteus oculatus	38.25	3.00e-86	312.00
IUUC-Laf-054295	Loxodonta africana	98.51	0.00e+00	959.00
IUUC-Mcc-055765	Macaca mulatta	95.10	0.00e+00	950.00
IUUC-Meu-055997	Macropus eugenii	61.81	4.00e-132	464.00
IUUC-Mga-059412	Meleagris gallopavo	43.35	3.00e-102	365.00
IUUC-Mmr-061030	Microcebus murinus	97.99	0.00e+00	677.00
IUUC-Mdo-062936	Monodelphis domestica	89.66	0.00e+00	856.00
IUUC-Mmu-063767	Mus musculus	97.86	0.00e+00	946.00
IUUC-Mpu-066160	Mustela putorius furo	99.39	0.00e+00	965.00
IUUC-Mlu-068126	Myotis lucifugus	95.39	2.00e-155	541.00
IUUC-Nle-070041	Nomascus leucogenys	89.37	0.00e+00	818.00
IUUC-Opr-070394	Ochotona princeps	93.32	0.00e+00	940.00
IUUC-Oan-072828	Ornithorhynchus anatinus	57.96	3.00e-163	567.00
IUUC-Ocu-073980	Oryctolagus cuniculus	97.57	0.00e+00	699.00
IUUC-Ola-086686	Oryzias latipes	32.26	9.00e-65	240.00
IUUC-Oga-088422	Otolemur garnettii	93.79	0.00e+00	904.00
IUUC-Oar-089277	Ovis aries	94.22	0.00e+00	885.00
IUUC-Ptr-090853	Pan troglodytes	93.76	0.00e+00	947.00
IUUC-Pan-091993	Papio anubis	99.79	0.00e+00	966.00
IUUC-Psi-092975	Pelodiscus sinensis	75.46	0.00e+00	653.00
IUUC-Pfo-096831	Poecilia formosa	33.40	9.00e-70	257.00
IUUC-Pab-097944	Pongo abelii	99.79	0.00e+00	966.00
IUUC-Pca-100795	Procavia capensis	87.70	4.00e-178	617.00
IUUC-Pva-103180	Pteropus vampyrus	92.59	0.00e+00	931.00
IUUC-Rno-105736	Rattus norvegicus	96.00	0.00e+00	936.00
IUUC-Sha-107411	Sarcophilus harrisii	53.29	9.00e-149	519.00
IUUC-Sar-113371	Sorex araneus	90.05	0.00e+00	752.00
IUUC-Tgu-116998	Taeniopygia guttata	47.27	8.00e-103	367.00
IUUC-Tru-117532	Takifugu rubripes	33.54	6.00e-71	261.00
IUUC-Tsy-119072	Tarsius syrichta	86.07	5.00e-180	623.00
IUUC-Tbe-127820	Tupaia belangeri	87.94	1.00e-140	493.00
IUUC-Ttr-128310	Tursiops truncatus	99.10	1.00e-132	466.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence